Trimin1|352655|estExt_Genemark1.C_Ctg_1270030 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352655
Unique Name	Trimin1\|352655\|estExt_Genemark1.C_Ctg_1270030
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	599

Homology

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BLAST of jgi.p|Trimin1|352655 vs. uniprot
Match: A0A835ZKB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKB6_9STRA)

HSP 1 Score: 846 bits (2185), Expect = 4.350e-304
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0

Query:    1 MHQRSGVKGSTAVTALLGTAALCGGAVYFFVKQVTDQKDWGAAQEQLLENPIITLDFDAKKRGSSGGASKQRLRQLCSGSATLRQQRLVVNMSLKLLKAITLLRTGRDAPVIHALPFVSSPIAAMSPXXXXXXXXXXXXXXXXXXXXXXGDSDFRPDLSLSFEMELAMMAADALSCAPDSSSNGVCSDGHGQRNRSRVGAPRRPRLVVLRRDXXXXXXXXXXXLSXXXXXXXXXXXLRDAVAQTDGDGAPSKVEVEVAAAAERCSVAVQCSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFRLLPVEGMTEGQGEAGGVRMMREVQASTQLSPQRLHVRVGGERGVRDADRGQARTAWQVLSGVGTQGEGRAQGVGDGGLWGHRGGDRGFDAVWKGLQWLDGDMAGLARAAHALDARWAADALRLQALHSEAQAEAAAATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQLVAARVLLQQLEMQLCAPLXXXXXXXPLRSSPRRGRAPASADVPATRGADADAGGSKAEATRRYQRGSDMAQALTAALGAAAANGHGEGTGAVKALAACGGVRGCLP 598
            MHQRSGVKGSTAVTALLGTAALCGGAVYFFVKQVTDQKDWGAAQEQLLENPIITLDFDAKKRGSSGGASKQRLRQLCSGSATLRQQRLVVNMSLKLLKAITLLRTGRDAPVIHALPFVSSPIAAMSPXXXXXXXXXXXXXXXXXXXXXXGDSDFRPDLSLSFEMELAMMAADALSCAPDSSSNGVCSDGHGQRNRSRVGAPRRPRLVVLRRDXXXXXXXXXXXLSXXXXXXXXXXXLRDAVAQTDGDGAPSKVEVEVAAAAERCSVAVQCSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFRLLPVEGMTEGQGEAGGVRMMREVQASTQLSPQRLHVRVGGERGVRDADRGQARTAWQVLSGVGTQGEGRAQGVGDGGLWGHRGGDRGFDAVWKGLQWLDGDMAGLARAAHALDARWAADALRLQALHSEAQAEAAAATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQLVAARVLLQQLEMQLCAPLXXXXXXXPLRSSPRRGRAPASADVPATRGADADAGGSKAEATRRYQRGSDMAQALTAALGAAAANGHGEGTGAVKALAACGGVRGCLP
Sbjct:    1 MHQRSGVKGSTAVTALLGTAALCGGAVYFFVKQVTDQKDWGAAQEQLLENPIITLDFDAKKRGSSGGASKQRLRQLCSGSATLRQQRLVVNMSLKLLKAITLLRTGRDAPVIHALPFVSSPIAAMSPXXXXXXXXXXXXXXXXXXXXXXGDSDFRPDLSLSFEMELAMMAADALSCAPDSSSNGVCSDGHGQRNRSRVGAPRRPRLVVLRRDXXXXXXXXXXXLSXXXXXXXXXXXLRDAVAQTDGDGAPSKVEVEVAAAAERCSVAVQCSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPFRLLPVEGMTEGQGEAGGVRMMREVQASTQLSPQRLHVRVGGERGVRDADRGQARTAWQVLSGVGTQGEGRAQGVGDGGLWGHRGGDRGFDAVWKGLQWLDGDMAGLARAAHALDARWAADALRLQALHSEAQAEAAAATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQLVAARVLLQQLEMQLCAPLXXXXXXXPLRSSPRRGRAPASADVPATRGADADAGGSKAEATRRYQRGSDMAQALTAALGAAAANGHGEGTGAVKALAACGGVRGCLP 598

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352655 vs. uniprot

BLAST of jgi.p|Trimin1|352655 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZKB6_9STRA	4.350e-304	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 485..505
None	No IPR available	COILS	Coil	Coil	coord: 431..451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 443..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 509..557
None	No IPR available	PANTHER	PTHR13037	FORMIN	coord: 215..518

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_127	contig	Contig_127:241390..246563 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352655	mRNA_14860	Tribonema minus UTEX_B_3156	mRNA	Contig_127 241390..246626 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352655|estExt_Genemark1.C_Ctg_1270030 ID=Trimin1|352655|estExt_Genemark1.C_Ctg_1270030|Name=jgi.p|Trimin1|352655|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=599bp
MHQRSGVKGSTAVTALLGTAALCGGAVYFFVKQVTDQKDWGAAQEQLLEN
PIITLDFDAKKRGSSGGASKQRLRQLCSGSATLRQQRLVVNMSLKLLKAI
TLLRTGRDAPVIHALPFVSSPIAAMSPPRRSARRRGGGSRDSSSSNSSGG
DSDFRPDLSLSFEMELAMMAADALSCAPDSSSNGVCSDGHGQRNRSRVGA
PRRPRLVVLRRDSSHSPPPPPPPLSPPPLSPLLPPPLRDAVAQTDGDGAP
SKVEVEVAAAAERCSVAVQCSAPPPPQHAATQASLMVDSEQQTEPPRGVA
ALPPPAAPPFRLLPVEGMTEGQGEAGGVRMMREVQASTQLSPQRLHVRVG
GERGVRDADRGQARTAWQVLSGVGTQGEGRAQGVGDGGLWGHRGGDRGFD
AVWKGLQWLDGDMAGLARAAHALDARWAADALRLQALHSEAQAEAAAATQ
QLASHAQPPPPPPPQQPSAAATAAAGGGAQPAAAAAAAEAQLVAARVLLQ
QLEMQLCAPLPPPPPPAPLRSSPRRGRAPASADVPATRGADADAGGSKAE
ATRRYQRGSDMAQALTAALGAAAANGHGEGTGAVKALAACGGVRGCLP*