Trimin1|352637|estExt_Genemark1.C_Ctg_1260047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352637
Unique NameTrimin1|352637|estExt_Genemark1.C_Ctg_1260047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length107
Homology
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BLAST of jgi.p|Trimin1|352637 vs. uniprot
Match: A0A835ZCU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU1_9STRA)

HSP 1 Score: 218 bits (555), Expect = 5.180e-72
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MVFDSEGSFPMSTLNRDAANIGVSDADMRVCFQTGECEVPQEFEQSMTKAFNQMPYMASKQTMTVVDGDSEYEEPINWAAQWIDADLEGNFPVTGGGGAAAEEFSI 106
            MVFDSEGSFPMSTLNRDAANIGVSDADMRVCFQTGECEVPQEFEQSMTKAFNQMPYMASKQTMTVVDGDSEYEEPINWAAQWIDADLEGNFPVTGGGGAAAEEFSI
Sbjct:    1 MVFDSEGSFPMSTLNRDAANIGVSDADMRVCFQTGECEVPQEFEQSMTKAFNQMPYMASKQTMTVVDGDSEYEEPINWAAQWIDADLEGNFPVTGGGGAAAEEFSI 106
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BLAST of jgi.p|Trimin1|352637 vs. uniprot
Match: A0A835Z247_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z247_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.530e-33
Identity = 59/105 (56.19%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:    2 VFDSEGSFPMSTLNRDAANIGVSDADMRVCFQTGECEVPQEFEQSMTKAFNQMPYMASKQTMTVVDGDSEYEEPINWAAQWIDADLEGNFPVTGGGGAAAEEFSI 106
            VFDSEG+F M  L+ D + + V++ADM  CFQTGECE+PQEFE+ MTKAFNQ+PY+ +KQTMTVVDGDSE+EEP+ WA +W  ++++ + PV      +  EF I
Sbjct:   45 VFDSEGTFSMQELDTDPS-LQVTEADMMTCFQTGECEIPQEFEKKMTKAFNQVPYVGTKQTMTVVDGDSEHEEPVPWAGKW--SEVDDDIPVEAYQNESDAEFDI 146
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352637 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZCU1_9STRA5.180e-72100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z247_9STRA1.530e-3356.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_126contigContig_126:382264..383742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352637mRNA_13587Tribonema minus UTEX_B_3156 mRNAContig_126 381829..383742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352637|estExt_Genemark1.C_Ctg_1260047 ID=Trimin1|352637|estExt_Genemark1.C_Ctg_1260047|Name=jgi.p|Trimin1|352637|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=107bp
MVFDSEGSFPMSTLNRDAANIGVSDADMRVCFQTGECEVPQEFEQSMTKA
FNQMPYMASKQTMTVVDGDSEYEEPINWAAQWIDADLEGNFPVTGGGGAA
AEEFSI*
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