Trimin1|352573|estExt_Genemark1.C_Ctg_1240017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352573
Unique NameTrimin1|352573|estExt_Genemark1.C_Ctg_1240017
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length140
Homology
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BLAST of jgi.p|Trimin1|352573 vs. uniprot
Match: A0A835ZCZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.470e-33
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 AAGSTDEVQGRAAGAREHANAGHGAADAHAVAADELAAVQTDAAPRHRGQERGAPAVAAAAQHRLEQ 67
            AAGSTDEVQGRAAGAREHANAGHGAADAHAVAADELAAVQTDAAPRHRGQERGAPAVAAAAQHRLEQ
Sbjct:    1 AAGSTDEVQGRAAGAREHANAGHGAADAHAVAADELAAVQTDAAPRHRGQERGAPAVAAAAQHRLEQ 67
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352573 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZCZ5_9STRA4.470e-33100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_124contigContig_124:118921..121666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352573mRNA_15952Tribonema minus UTEX_B_3156 mRNAContig_124 118920..121666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352573|estExt_Genemark1.C_Ctg_1240017 ID=Trimin1|352573|estExt_Genemark1.C_Ctg_1240017|Name=jgi.p|Trimin1|352573|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=140bp
AAGSTDEVQGRAAGAREHANAGHGAADAHAVAADELAAVQTDAAPRHRGQ
ERGAPAVAAAAQHRLEQGGARRRRLAERWRGQQQREHRHDAAAAPGGGGG
GGGGGGARGRVPAAGGGGSGGGAGGGPAAAAAPAPRRRQL
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