Trimin1|352553|estExt_Genemark1.C_Ctg_1230033 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352553
Unique NameTrimin1|352553|estExt_Genemark1.C_Ctg_1230033
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length169
Homology
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A835Z1C3_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.770e-95
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query:    1 MSSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCA 168
            MSSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCA
Sbjct:    1 MSSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCA 168          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: D7G8S5_ECTSI (V-type proton ATPase proteolipid subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S5_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.180e-79
Identity = 146/163 (89.57%), Postives = 152/163 (93.25%), Query Frame = 0
Query:    5 LETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            +ETCPSSAAFFGFMG A+++VF NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIL G+I  P    NT FSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEAL LYG+IVALILSQQSYSC
Sbjct:    1 METCPSSAAFFGFMGVASSMVFGNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILSGAIGMPSDTGNT-FSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALGLYGMIVALILSQQSYSC 162          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: F0YK80_AURAN (V-type proton ATPase proteolipid subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YK80_AURAN)

HSP 1 Score: 239 bits (610), Expect = 2.330e-78
Identity = 145/166 (87.35%), Postives = 153/166 (92.17%), Query Frame = 0
Query:    4 SLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQN--TKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            S ETCP+SA FFGFMG  +ALVF+NIGAAYGTAKSGVGI+SMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQG+IT+PD      TKFSSFSGYA+LAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQE+LFVGMILILIFAEAL LYGLIVALILSQQS  C
Sbjct:    6 STETCPTSAPFFGFMGVTSALVFANIGAAYGTAKSGVGIASMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGAITKPDAGSGGTTKFSSFSGYAYLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSADC 171          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A7S3GT47_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT47_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.980e-77
Identity = 139/165 (84.24%), Postives = 151/165 (91.52%), Query Frame = 0
Query:    4 SLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCA 168
            S ETCP+SA FFGFMG  AAL F+NIGAAYGTAKSGVGI+SMGVM+PGLVM+NIIPVVMAGVLGIYGLIVAVI+QGSIT P  +  TK+SSF+GYA L+AGLCCGLSG XXXXXXXXX DAGVRAVGQQE+LFVGMILILIFAEAL LYGLIVALILSQQS+SCA
Sbjct:    6 SRETCPTSAPFFGFMGVTAALCFANIGAAYGTAKSGVGIASMGVMHPGLVMKNIIPVVMAGVLGIYGLIVAVIIQGSITVPSADGATKYSSFTGYAHLSAGLCCGLSGLXXXXXXXXXGDAGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQQSFSCA 170          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A7S2RWN8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWN8_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.890e-73
Identity = 138/162 (85.19%), Postives = 149/162 (91.98%), Query Frame = 0
Query:    6 ETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            E CP+SA FFGFMG +AALVF+NIGAAYGTAKSGVGI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVIL GSIT+P   ++ KFSSFSG+AFLAAGLCCGLSGXXXXXXXXXXX AGVRAVGQQE+LFVG+ILILIFAEAL LYGLIVALILSQQS SC
Sbjct:    4 ELCPTSAPFFGFMGVSAALVFANIGAAYGTAKSGVGIASMGVMKPNLVMRNIIPVIMAGVLGIYGLIVAVILNGSITKPANNES-KFSSFSGFAFLAAGLCCGLSGXXXXXXXXXXXXAGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSQQSVSC 164          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A7S2GLL8_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLL8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.080e-72
Identity = 136/167 (81.44%), Postives = 152/167 (91.02%), Query Frame = 0
Query:    1 MSSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            +S+++E CP+ A FFGFMG ++ALVF+NIGAAYGTAKSG+GI+SMGVM P LVMRNIIPV+MAGVLGIYGLIVAVILQGSIT+P TE  TKFSS+SG+AFLAAGLCCGLSGXXXXXXXXXXX  GVRAVGQQE+LFVG+ILILIFAEAL LYGLIVALILS Q Y C
Sbjct:    6 LSTAVEACPTYAPFFGFMGVSSALVFANIGAAYGTAKSGIGIASMGVMKPELVMRNIIPVIMAGVLGIYGLIVAVILQGSITKP-TEGVTKFSSYSGFAFLAAGLCCGLSGXXXXXXXXXXXXXGVRAVGQQEKLFVGVILILIFAEALGLYGLIVALILSMQIYEC 171          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A835YJ26_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ26_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.180e-70
Identity = 129/166 (77.71%), Postives = 146/166 (87.95%), Query Frame = 0
Query:    3 SSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCA 168
            SS+ETCP+ A  FGF+G AA+LV +N GAAYGTAK+G+GI+SMGVM+PG+VMRNIIPVVMAGVLGIYGLIV+VIL G+IT       T +S+FSG+A LAAGLCCG+SG XXXXXXX   DAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC+
Sbjct:    2 SSMETCPTWAPLFGFLGVAASLVLANTGAAYGTAKAGLGIASMGVMHPGMVMRNIIPVVMAGVLGIYGLIVSVILLGTITGTTPTGVTTYSTFSGFAHLAAGLCCGMSGLXXXXXXXIVGDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSCS 167          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: B8BTR9_THAPS (V-type proton ATPase proteolipid subunit n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8BTR9_THAPS)

HSP 1 Score: 214 bits (546), Expect = 1.050e-68
Identity = 132/163 (80.98%), Postives = 144/163 (88.34%), Query Frame = 0
Query:    5 LETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            +ETCP+SA FFGFMG  AALVF+NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+QGSI  P    + ++S ++G+A LAAGLCCGL  XXXXXXXXXXX  GVRAVGQQE+LFVGMILILIFAEAL LYGLIVALILSQ S+ C
Sbjct:    1 METCPASAPFFGFMGVTAALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSIVAPQNGLS-QYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVC 162          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A7S3LI96_9STRA (V-type proton ATPase proteolipid subunit n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LI96_9STRA)

HSP 1 Score: 215 bits (547), Expect = 4.160e-68
Identity = 133/167 (79.64%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    1 MSSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            MS  +ETCP+SA FFGFMG  +ALVF+NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+QGSI  P    + ++S ++G+A LAAGLCCGL  XXXXXXXXXXX  GVRAVGQQE+LFVGMILILIFAEAL LYGLIVALILSQ S+ C
Sbjct:   50 MSVEMETCPASAPFFGFMGVTSALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGSILSPQNGLS-QYSLYTGFAHLAAGLCCGLXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNSFVC 215          
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Match: A0A7S2RP84_9STRA (V-type proton ATPase proteolipid subunit n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RP84_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.110e-67
Identity = 131/163 (80.37%), Postives = 141/163 (86.50%), Query Frame = 0
Query:    5 LETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAFLAAGLCCGLSGXXXXXXXXXXXDAGVRAVGQQERLFVGMILILIFAEALALYGLIVALILSQQSYSC 167
            +E CP+SA FFGFMG  AALVF+NIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVI+QG+I +P+      +S FSG+A LAAGLCCG   XXXXXXXXXXX  GVRAVGQQE+LFVGMILILIFAEAL LYGLIVALILSQ  Y C
Sbjct:    7 MEACPASAPFFGFMGVTAALVFANIGAAYGTAKSGVGISSMGVMNPGLVMRNIIPVVMAGVLGIYGLIVAVIIQGAIKKPEGGL-AVYSLFSGFAHLAAGLCCGXXXXXXXXXXXXXXXXGVRAVGQQEKLFVGMILILIFAEALGLYGLIVALILSQNGYDC 168          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352553 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1C3_9STRA1.770e-95100.00V-type proton ATPase proteolipid subunit n=1 Tax=T... [more]
D7G8S5_ECTSI2.180e-7989.57V-type proton ATPase proteolipid subunit n=1 Tax=E... [more]
F0YK80_AURAN2.330e-7887.35V-type proton ATPase proteolipid subunit n=2 Tax=P... [more]
A0A7S3GT47_9STRA1.980e-7784.24V-type proton ATPase proteolipid subunit n=1 Tax=S... [more]
A0A7S2RWN8_9STRA1.890e-7385.19V-type proton ATPase proteolipid subunit n=1 Tax=R... [more]
A0A7S2GLL8_9STRA2.080e-7281.44V-type proton ATPase proteolipid subunit n=1 Tax=D... [more]
A0A835YJ26_9STRA1.180e-7077.71V-type proton ATPase proteolipid subunit n=1 Tax=T... [more]
B8BTR9_THAPS1.050e-6880.98V-type proton ATPase proteolipid subunit n=19 Tax=... [more]
A0A7S3LI96_9STRA4.160e-6879.64V-type proton ATPase proteolipid subunit n=2 Tax=A... [more]
A0A7S2RP84_9STRA2.110e-6780.37V-type proton ATPase proteolipid subunit n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 57..81
score: 66.11
coord: 112..138
score: 78.75
coord: 139..162
score: 80.37
coord: 31..55
score: 72.53
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 101..160
e-value: 2.0E-22
score: 79.3
coord: 19..77
e-value: 7.1E-12
score: 45.5
IPR011555V-ATPase proteolipid subunit C, eukaryoticTIGRFAMTIGR01100TIGR01100coord: 14..126
e-value: 3.9E-46
score: 153.7
IPR035921F/V-ATP synthase subunit C superfamilyGENE3D1.20.120.610coord: 12..166
e-value: 8.8E-59
score: 199.5
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 93..161
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 13..78
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 6..163
NoneNo IPR availablePANTHERPTHR10263:SF5V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNITcoord: 6..163
NoneNo IPR availableCDDcd18176ATP-synt_Vo_c_ATP6C_rpt2coord: 95..161
e-value: 3.13857E-30
score: 102.969
NoneNo IPR availableCDDcd18175ATP-synt_Vo_c_ATP6C_rpt1coord: 14..81
e-value: 3.35453E-30
score: 102.999

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_123contigContig_123:246143..248270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352553mRNA_14494Tribonema minus UTEX_B_3156 mRNAContig_123 245610..248759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352553|estExt_Genemark1.C_Ctg_1230033 ID=Trimin1|352553|estExt_Genemark1.C_Ctg_1230033|Name=jgi.p|Trimin1|352553|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=169bp
MSSSLETCPSSAAFFGFMGTAAALVFSNIGAAYGTAKSGVGISSMGVMNP
GLVMRNIIPVVMAGVLGIYGLIVAVILQGSITQPDTEQNTKFSSFSGYAF
LAAGLCCGLSGLAAGMAIGIVGDAGVRAVGQQERLFVGMILILIFAEALA
LYGLIVALILSQQSYSCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000245ATPase_proteolipid_csu
IPR002379ATPase_proteolipid_c-like_dom
IPR011555ATPase_proteolipid_su_C_euk
IPR035921F/V-ATP_Csub_sf