Trimin1|352526|estExt_Genemark1.C_Ctg_1220032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352526
Unique NameTrimin1|352526|estExt_Genemark1.C_Ctg_1220032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length271
Homology
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BLAST of jgi.p|Trimin1|352526 vs. uniprot
Match: A0A835ZKW9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKW9_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 5.330e-170
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0 
Query:    1 APEVSPPQEQQSQEQQNCDAHQAPSSDQLQLEDPDADLLGEHVHAAPSAVAVGELGAFARRALPPLFCIPYVGLVIPARRGDQRVYAVNALVIDEITATLRAARAADASAFAVDASPAAVLAAGARTEWTLGARVNEAPPGTPPNCVFITNVAGTDAQYRAAXXXXXXXXVPVAAALYVTTRAVAAGEELLGFYGNAAGYARPYALYADALSSEEGDAHAREQQRSADAAYAHITDARVFSQIGFLRRIAVPTAAAAREAADGTSAAAAP 270
            APEVSPPQEQQSQEQQNCDAHQAPSSDQLQLEDPDADLLGEHVHAAPSAVAVGELGAFARRALPPLFCIPYVGLVIPARRGDQRVYAVNALVIDEITATLRAARAADASAFAVDASPAAVLAAGARTEWTLGARVNEAPPGTPPNCVFITNVAGTDAQYRAAXXXXXXXXVPVAAALYVTTRAVAAGEELLGFYGNAAGYARPYALYADALSSEEGDAHAREQQRSADAAYAHITDARVFSQIGFLRRIAVPTAAAAREAADGTSAAAAP
Sbjct:    1 APEVSPPQEQQSQEQQNCDAHQAPSSDQLQLEDPDADLLGEHVHAAPSAVAVGELGAFARRALPPLFCIPYVGLVIPARRGDQRVYAVNALVIDEITATLRAARAADASAFAVDASPAAVLAAGARTEWTLGARVNEAPPGTPPNCVFITNVAGTDAQYRAAXXXXXXXXVPVAAALYVTTRAVAAGEELLGFYGNAAGYARPYALYADALSSEEGDAHAREQQRSADAAYAHITDARVFSQIGFLRRIAVPTAAAAREAADGTSAAAAP 270
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352526 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZKW9_9STRA5.330e-170100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_122contigContig_122:283836..285609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352526mRNA_13930Tribonema minus UTEX_B_3156 mRNAContig_122 283836..285610 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352526|estExt_Genemark1.C_Ctg_1220032 ID=Trimin1|352526|estExt_Genemark1.C_Ctg_1220032|Name=jgi.p|Trimin1|352526|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=271bp
APEVSPPQEQQSQEQQNCDAHQAPSSDQLQLEDPDADLLGEHVHAAPSAV
AVGELGAFARRALPPLFCIPYVGLVIPARRGDQRVYAVNALVIDEITATL
RAARAADASAFAVDASPAAVLAAGARTEWTLGARVNEAPPGTPPNCVFIT
NVAGTDAQYRAAAAAGGSGGVPVAAALYVTTRAVAAGEELLGFYGNAAGY
ARPYALYADALSSEEGDAHAREQQRSADAAYAHITDARVFSQIGFLRRIA
VPTAAAAREAADGTSAAAAP*
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