Trimin1|352400|estExt_Genemark1.C_Ctg_1180024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352400
Unique NameTrimin1|352400|estExt_Genemark1.C_Ctg_1180024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length349
Homology
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A835ZCK6_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK6_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 7.020e-221
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0
Query:    1 MRADASSSMDASSSTQEAAARMIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRERIALLVVDALLKDRAHPTHFSMAQSVELARDLRAACARIFTAASRALPHALRALTCLPAHPAPRQPLRTLMVGTGSDHHDLHAPVYATVACRRAATGSNLPGPVXXXXXXXXXXXXXXSHMEYTATNAELARLRETDGLDVQLARDGLRVEIELEXXXXXXXXXXXXXXXXAVQSK 348
            MRADASSSMDASSSTQEAAARMIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRERIALLVVDALLKDRAHPTHFSMAQSVELARDLRAACARIFTAASRALPHALRALTCLPAHPAPRQPLRTLMVGTGSDHHDLHAPVYATVACRRAATGSNLPGPVXXXXXXXXXXXXXXSHMEYTATNAELARLRETDGLDVQLARDGLRVEIELEXXXXXXXXXXXXXXXXAVQSK
Sbjct:    1 MRADASSSMDASSSTQEAAARMIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRERIALLVVDALLKDRAHPTHFSMAQSVELARDLRAACARIFTAASRALPHALRALTCLPAHPAPRQPLRTLMVGTGSDHHDLHAPVYATVACRRAATGSNLPGPVXXXXXXXXXXXXXXSHMEYTATNAELARLRETDGLDVQLARDGLRVEIELEXXXXXXXXXXXXXXXXAVQSK 348          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: D7G4W1_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W1_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 2.550e-56
Identity = 108/189 (57.14%), Postives = 133/189 (70.37%), Query Frame = 0
Query:   23 IDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSAD-PPTPVLVDSRTMHSLQRVFPYLCGT---NGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRER-IALLVVDALLKDRAHPTHFSMAQSVELARDLRA 206
            IDTGKT+REG +RW+PRH V  LDGIVL+HDHADA+LGLDDVR +Q+S    PTPV V  RT  S++RVFPYL G    NG AG R VAAL+F  F   +PF V GL + P PV+HGEDY+S+GF+FGP   +  YISD SRVPP++M  L +   + LLV DAL+  + H THF +  SV LA  L+A
Sbjct:  260 IDTGKTWREGAIRWFPRHGVRGLDGIVLTHDHADAMLGLDDVRSIQDSRKRTPTPVHVSERTDRSVRRVFPYLVGREDDNG-AGGRFVAALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESMEFLEKHGPMQLLVCDALMVSKKHRTHFCVEDSVVLAGQLKA 447          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A6H5JEM8_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM8_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 4.730e-55
Identity = 102/175 (58.29%), Postives = 125/175 (71.43%), Query Frame = 0
Query:   23 IDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSAD-PPTPVLVDSRTMHSLQRVFPYLCGT---NGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRER-IALLVVDALLKDRAHPTHF 192
            IDTGKT+REG +RW+PRH V  LDGIVL+HDHADA+LGLDDVR +Q+S    PTPV V  RT  S++RVFPYL G    NG AG R VAAL+F  F   +PF V GL + P PV+HGEDY+S+GF+FGP   +  YISD SRVPP++M  L +   + LLV DAL+  + H THF
Sbjct:  199 IDTGKTWREGAIRWFPRHGVRGLDGIVLTHDHADAMLGLDDVRSIQDSRKRTPTPVHVSERTDRSVRRVFPYLVGREDDNG-AGGRFVAALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESMEFLEKHGPMQLLVCDALMVSKKHRTHF 372          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A5J4ZQL0_9ASTE (Lactamase_B domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZQL0_9ASTE)

HSP 1 Score: 160 bits (404), Expect = 8.360e-43
Identity = 83/191 (43.46%), Postives = 123/191 (64.40%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSADP----PTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTP--HEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRERIALLVVDALLKDRAHPTHFSMAQSVELARDL 204
            +ID GKTFRE VLRW+ +H ++ +D IVL+H+HADA+LGLDD+R +Q  +      PTP+ +    M S+   FPYL     KAG  +R VA LD++      ++PF  +GL ++P+PV+HGEDY+S GF+FG  + R  YISD SR  P T   +  +++ LL++D L K+ +H  HF + Q++E  + L
Sbjct:   82 LIDVGKTFREQVLRWFTQHKISRVDSIVLTHEHADAVLGLDDIRAVQPYSPTNDIEPTPIYLTQYAMDSIAEKFPYLVRKKLKAGQEVRRVAQLDWKIIENDCNKPFIASGLELIPLPVMHGEDYVSLGFLFG-ENCRVAYISDVSRFLPPTEHYISSQQLDLLILDTLYKNGSHNVHFCLPQTLEAVKKL 271          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A0A0LVQ4_CUCSA (Lactamase_B domain-containing protein n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LVQ4_CUCSA)

HSP 1 Score: 160 bits (404), Expect = 9.700e-43
Identity = 86/195 (44.10%), Postives = 122/195 (62.56%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQ-----NSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTPH--EPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRE---RIALLVVDALLKDRAHPTHFSMAQSVELARDL 204
            +ID GKTFRE VLRW+  H +  +D I+L+H+HADAILGLDD+R +Q     N  DP TP+ +   +M S+   FPYL     K G  +R VA LD++    H  +PF  +GL  +P+PV+HGEDY+  GF+FG  + R  YISD SR+PP T  V+      ++ LL++D L K+ +H THF   Q+++  + L
Sbjct:   85 LIDVGKTFREQVLRWFTHHRIPKVDSIILTHEHADAILGLDDIRAVQPFNAVNDIDP-TPIYLSQHSMESISVKFPYLVQKKLKEGQEVRRVAQLDWKIIENHHEKPFVASGLRFIPLPVMHGEDYICLGFLFGENY-RVAYISDVSRIPPSTEHVISINGAGQVDLLILDTLYKNGSHNTHFCFPQTLDAVKKL 277          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A7J7CQF8_TRIWF (Putative hydrolase n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CQF8_TRIWF)

HSP 1 Score: 158 bits (399), Expect = 1.350e-42
Identity = 85/195 (43.59%), Postives = 122/195 (62.56%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQ-----NSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTPH--EPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRE---RIALLVVDALLKDRAHPTHFSMAQSVELARDL 204
            +ID GKTFRE VLRW+  H +  +D I+L+H+HADA+LGLDD+R +Q     N  DP TP+ +    M+S+   FPYL     K G  +R VA LD++    H  +PF  +GL  +P+PV+HG+DY+  GF+FG   +R  YISD SR+P  T  VL +    ++ LL++D L K R+H  HF + Q++E  + L
Sbjct:   32 LIDAGKTFREQVLRWFTFHKIPQVDSILLTHEHADAVLGLDDIRAVQPYSPINDIDP-TPIYLSQHAMNSISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEHCDKPFVASGLHFVPLPVMHGKDYICLGFLFG-EKSRVAYISDVSRIPSTTEYVLSKTGAGQLDLLILDTLYKSRSHNVHFCLPQTLEAVKKL 224          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: V4UDI0_CITCL (Lactamase_B domain-containing protein n=3 Tax=Citrus TaxID=2706 RepID=V4UDI0_CITCL)

HSP 1 Score: 159 bits (402), Expect = 2.010e-42
Identity = 86/195 (44.10%), Postives = 120/195 (61.54%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQ-----NSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTPH--EPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRE---RIALLVVDALLKDRAHPTHFSMAQSVELARDL 204
            +ID GKTFRE +LRW+  H +  +D I+L+H+HADA+LGLDD+R +Q     N  DP TP+ +    M S+   FPYL     K G  +R VA LD++       +PF V+GL  +P+PV+HGEDY+  GF+FG    R  YISD SR+PP T  V+ +    ++ LL++D L KD  H THF   Q++E  + L
Sbjct:   87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDP-TPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVVSGLKFVPLPVMHGEDYVCLGFLFG-EKCRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRL 279          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A835UR71_VANPL (Lactamase_B domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UR71_VANPL)

HSP 1 Score: 159 bits (401), Expect = 3.940e-42
Identity = 83/195 (42.56%), Postives = 122/195 (62.56%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQNSADP----PTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTP--HEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRE---RIALLVVDALLKDRAHPTHFSMAQSVELARDLR 205
            +ID GKTFRE VLRW+  H +  +D I+L+H+HADA+LGLDD+R +Q  +      PTPV +    M S++  FPYL     K G  +R +A LD+R   P   +PF  +G+  +P+PV+HGEDY+  GF+FG   +R  YISD SR+P  T  V+ +    ++ LL++D L K+ +H THF + QS++  +  R
Sbjct:  101 LIDVGKTFREQVLRWFTHHKIPRVDSIILTHEHADAVLGLDDIRAVQPHSPTNDIEPTPVYLTQYAMDSIKEKFPYLVKKKLKEGEEVRRIAQLDWRIIEPDCEKPFISSGIEFIPLPVMHGEDYVCLGFLFG-KKSRIAYISDVSRIPASTEQVISKSEEWQLDLLILDTLYKEGSHNTHFCLTQSLDAVKRTR 294          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: A0A7J7E332_TRIWF (Lactamase_B domain-containing protein n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7E332_TRIWF)

HSP 1 Score: 158 bits (400), Expect = 4.560e-42
Identity = 86/195 (44.10%), Postives = 122/195 (62.56%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQ-----NSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTPH--EPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRE---RIALLVVDALLKDRAHPTHFSMAQSVELARDL 204
            +ID GKTFRE VLRW+  H +  +D I+L+H+HADA+LGLDD+R +Q     N  DP TP+ +    M+S+   FPYL     K G  +R VA LD++    H  +PF  +GL  +P+PV+HGEDY+  GF+FG   +R  YISD SR+P  T  VL +    ++ LL++D L K+ +H THF   Q++E  + L
Sbjct:   93 LIDVGKTFREQVLRWFTFHKIPQVDSILLTHEHADAVLGLDDIRAVQPFSPINDIDP-TPIYLSQHAMNSISTKFPYLVRKKLKEGQEVRRVAQLDWKIIEEHCDKPFVASGLHFVPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPSTTEYVLSKTGAGQLDLLILDTLYKNGSHNTHFCFPQTLEAVKKL 285          
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Match: UPI001CF9B94E (putative hydrolase C777.06c n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9B94E)

HSP 1 Score: 157 bits (397), Expect = 1.040e-41
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 0
Query:   22 MIDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQ-----NSADPPTPVLVDSRTMHSLQRVFPYLCGTNGKAG--IRHVAALDFRTFTPH--EPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRE---RIALLVVDALLKDRAHPTHFSMAQSVELARDL 204
            +ID GKTFRE VLRW+  H +  +D I+L+H+HADA+LGLDD+RG+Q     N  DP TPV +    M S+   FPYL     K G  IR VA +D++       +PF  +GL ++P+PV+HGEDY+S GF+FG    R  YISD SR+P  T  V+ +    ++ LL++D L K  +H THF + Q++E  + L
Sbjct:   85 LIDVGKTFREQVLRWFTFHKIPRVDSIILTHEHADAVLGLDDIRGVQPYSATNDIDP-TPVYLTQFAMESVSVKFPYLIRKKLKEGQEIRRVAQVDWKIIEEQCDKPFVASGLKLIPLPVMHGEDYVSLGFLFG-EKCRVAYISDVSRIPSSTEYVISKSGAGQLDLLILDTLYKKGSHNTHFCLPQTLEAVKRL 277          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352400 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCK6_9STRA7.020e-221100.00Beta-lactamase-like protein n=1 Tax=Tribonema minu... [more]
D7G4W1_ECTSI2.550e-5657.14Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JEM8_9PHAE4.730e-5558.29Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A5J4ZQL0_9ASTE8.360e-4343.46Lactamase_B domain-containing protein n=1 Tax=Nyss... [more]
A0A0A0LVQ4_CUCSA9.700e-4344.10Lactamase_B domain-containing protein n=5 Tax=Cucu... [more]
A0A7J7CQF8_TRIWF1.350e-4243.59Putative hydrolase n=2 Tax=Tripterygium wilfordii ... [more]
V4UDI0_CITCL2.010e-4244.10Lactamase_B domain-containing protein n=3 Tax=Citr... [more]
A0A835UR71_VANPL3.940e-4242.56Lactamase_B domain-containing protein n=1 Tax=Vani... [more]
A0A7J7E332_TRIWF4.560e-4244.10Lactamase_B domain-containing protein n=2 Tax=Trip... [more]
UPI001CF9B94E1.040e-4144.62putative hydrolase C777.06c n=2 Tax=Anacardiaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001279Metallo-beta-lactamasePFAMPF12706Lactamase_B_2coord: 23..207
e-value: 4.7E-25
score: 88.3
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 2..227
e-value: 1.4E-40
score: 141.6
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 22..212
NoneNo IPR availablePANTHERPTHR42663HYDROLASE C777.06C-RELATED-RELATEDcoord: 4..208
coord: 281..324
NoneNo IPR availableCDDcd16279metallo-hydrolase-like_MBL-foldcoord: 23..181
e-value: 7.6024E-43
score: 145.309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_118contigContig_118:239588..244693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352400mRNA_13249Tribonema minus UTEX_B_3156 mRNAContig_118 239588..244795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352400|estExt_Genemark1.C_Ctg_1180024 ID=Trimin1|352400|estExt_Genemark1.C_Ctg_1180024|Name=jgi.p|Trimin1|352400|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=349bp
MRADASSSMDASSSTQEAAARMIDTGKTFREGVLRWYPRHDVTSLDGIVL
SHDHADAILGLDDVRGLQNSADPPTPVLVDSRTMHSLQRVFPYLCGTNGK
AGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHA
RTVYISDCSRVPPDTMAVLRRERIALLVVDALLKDRAHPTHFSMAQSVEL
ARDLRAACARIFTAASRALPHALRALTCLPAHPAPRQPLRTLMVGTGSDH
HDLHAPVYATVACRRAATGSNLPGPVPPHAPLRTLMVGMGSHMEYTATNA
ELARLRETDGLDVQLARDGLRVEIELEEEDGAAAAAAAAAAAAAVQSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR036866RibonucZ/Hydroxyglut_hydro