Trimin1|352096|estExt_Genemark1.C_Ctg_1080035 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352096
Unique NameTrimin1|352096|estExt_Genemark1.C_Ctg_1080035
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length449
Homology
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A835ZH25_9STRA (SGTA_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH25_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 2.410e-218
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query:    1 MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNNPAIMKMAQDXXXXXXXQGMMSNPAMMAQMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGSRGAGIQDDPEMMELQELMQREGPMAAMQKVGNNPRLQAKIMEMMQKGGMGGMS 448
            MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNNPAIMKMAQDXXXXXXXQGMMSNPAMMAQMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGSRGAGIQDDPEMMELQELMQREGPMAAMQKVGNNPRLQAKIMEMMQKGGMGGMS
Sbjct:    1 MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNNPAIMKMAQDXXXXXXXQGMMSNPAMMAQMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGSRGAGIQDDPEMMELQELMQREGPMAAMQKVGNNPRLQAKIMEMMQKGGMGGMS 448          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A6H5J668_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J668_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 3.670e-45
Identity = 139/307 (45.28%), Postives = 185/307 (60.26%), Query Frame = 0
Query:   12 VVQYLEGLAGSSDGAVDDVSQ--LTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAA--EGTPEYDVQMNKIIATFKTKF-------------GNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA--------KAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGA 293
            ++  LE LA S++G +   S+  + +A ++L +AFG+   D  Q +ELS +P TL+SIF AG  A GA +A Q+   +  +  F +FV V+SAK       EG+  YD +M K++A FK +              G    XXXXXXXXXXXXXXXXXXXXXX      AA        K EGN+ +  + +  AEA Y+ AL+LSP+GPNSH+Y CNRAAA C+L   D AV DC  +IDL+P+Y KAY RLGYAY+ +ED      AY K++E+EP N AN +SL++A AKL A   A     RGA
Sbjct:    2 MLSVLEHLA-SAEGDLPSESRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAGGASFRXXXXXXXXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGARGDADEIATRGA 307          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: I2CPK1_NANGC (Conserved tpr domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPK1_NANGC)

HSP 1 Score: 152 bits (385), Expect = 3.080e-39
Identity = 99/276 (35.87%), Postives = 147/276 (53.26%), Query Frame = 0
Query:    6 KAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKL 279
            KA++ A+++ L+G A           ++ +A   L++  GVD A  +     SY+PATL  IF AGV+A    T   E  A+  +PLF++++G I+ K       EG+  Y  +  K  A FK K   +E+                            A K EGN  I  + + KA+  Y++A+ L P G +SH+Y+ NRAAAR  L +   AVED   +I+L+P+Y KAY+RLGYA++ ++       AYTKA++L+P N ANKE L KAEAK+
Sbjct:   11 KALSLAILEDLQGSA--------QTPEMESALATLRSTLGVDPAQGSDIAAYSYKPATLSQIFTAGVQALKLQTVGVEMAALKADPLFQQYLGKITEKGFFKDVEEGSKAYIDRFMKAAAKFKEK---QEQVSSATPSPADQARAD-------------ALKGEGNAAISAKDYEKADICYTKAITLVPAGASSHLYYSNRAAARSHLGNHSGAVEDAQKAIELNPSYSKAYSRLGYAHFYLQQYSKAKDAYTKALDLDPANAANKEYLAKAEAKI 262          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A7S2FWT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWT3_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.080e-33
Identity = 91/275 (33.09%), Postives = 135/275 (49.09%), Query Frame = 0
Query:   10 FAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAV 282
            F ++QYL  L    +  V  V  L AA   L   F ++T D  Q +E + E  TL  + AAG    GA +  +E E + +N +F++F+G + +K        G PEY  +  +++  FK +  + +                               K EGNE +K + +  A   YS+A+D+ P GP SHIY  NRA AR +L     AV+DC A+I+ +PAY KAY RLG A   + D       + KA+ELEP+N ++ + LK A+ K  AV
Sbjct:   13 FLIIQYLNDL--KLEPEVGSVDNLEAATQCLAENFSINTDDINQKEEYALESQTLLELLAAGKTQLGAKSYNEELEELQENKMFQQFLGSVKSKGFFNDTKPGEPEYKARYRRMVTKFKQRMNDSKANSKAAVAAGPTNEEKAEKF-----------KVEGNETLKAKNYDAAVELYSKAIDVCPDGPKSHIYFANRAMARHYLKQHLGAVDDCNAAIERNPAYAKAYTRLGLAQQALNDWSSAVENHKKAVELEPSNKSSAQYLKTAQQKYAAV 274          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A482RZ77_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ77_9ARCH)

HSP 1 Score: 132 bits (332), Expect = 3.770e-32
Identity = 89/267 (33.33%), Postives = 132/267 (49.44%), Query Frame = 0
Query:   10 FAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPLAA--EGTPEYDVQMNKIIATFKTKFGN----KEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKE 270
            F +++YL  L G+   A D++  +T   + L++ F V  +     K+ S  PA L+ I  AG  +    +     E    NP F  F+  +  K       EGT EY  +  K++  F+ K  +    KE+                              K +GN  I  + ++ A   YS A+ LS  GPNSH+Y+CNRAAA C+LN ++ AV DCL+S+ LSP Y+KA++RLG AYY++E       AY +A ELEP+N A K+
Sbjct:   10 FHIIEYLNALKGAGANA-DNIDTIT---SLLESEFNVSFSPD-NFKQYSTYPAGLEEIVEAGKASLNLKSFADAEEEAKANPKFSAFLETVVNKGYFQGTEEGTLEYLRRYAKLVKKFQEKAASAGPSKEDLEKQAEEM----------------------KLKGNSAIAQKDYKTAVEHYSEAIKLSSEGPNSHVYYCNRAAASCYLNQYEDAVNDCLSSVALSPDYVKAFSRLGLAYYHLEKFQEALDAYERAAELEPDNAATKD 249          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: H3GML2_PHYRM (STI1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GML2_PHYRM)

HSP 1 Score: 129 bits (324), Expect = 1.730e-29
Identity = 89/263 (33.84%), Postives = 134/263 (50.95%), Query Frame = 0
Query:   29 DVSQLTAAATALKAAFGVDTADAAQAKELSYEP-ATLDSIFAAGVKA----TGAVTALQEREAMMQNP-LFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVR 283
            D  ++  A + L  AFGVD  DA Q ++L+ +   + + IFAAG+KA    TGA  A+ E   + ++P L+KK+V  + AK     AA GT E+  +  K +  FK KFG+ +                               KA+GN  +  Q +  A   Y  AL LSP GP+SHIYH N AAA  +L  +   ++ C  SI L PAY+KAY+RLG A   ++D      ++ + +E++ +N A ++ L  AE K + V+
Sbjct:   26 DAQEIDTALSRLTEAFGVDVHDAEQRRQLAVDSDISFNEIFAAGLKALNLETGAKEAVDEDPVVKKHPELWKKWVAKLEAKGFFKDAAPGTSEHATRTAKALGKFKEKFGDVKPELSQEEKEAKAEE----------------VKAQGNAALSRQDYEGAAKLYREALQLSPEGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIVLKPAYVKAYSRLGSAQLQLQDFDGAIDSFRRGLEVDSSNAACRDGLADAERKRRQVQ 272          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A0P1AE70_PLAHL (TPR repeat-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AE70_PLAHL)

HSP 1 Score: 119 bits (298), Expect = 6.280e-26
Identity = 88/289 (30.45%), Postives = 139/289 (48.10%), Query Frame = 0
Query:   10 FAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEP-ATLDSIFAAGVKATGAVTALQEREAMM--QNP-------LFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSAS 286
            F  + Y++ L   + G V    Q+  A   L  AFGV+  DA Q ++L+       D +FAAG+KA    T + +    M  ++P       L+KK+V  + +K     A  G+ +Y +++NK +  FK KFG+ +                              AK +GN  +  Q +  A   Y  AL LSP GP+SHIYH N AAA  ++  +   ++ C  SI L P+Y+KAY+RLG A   + D      AY + +E++  N A ++ L +AE + + V++ S
Sbjct:   13 FNALAYIDAL--KTHGGVG-TEQVDEALIRLTEAFGVNIHDAEQKRQLAINSDIPFDEVFAAGLKALSLETGMPDEAKSMADEDPVVKMHPELWKKWVAKLDSKGFFKDATPGSTDYVMRLNKALLKFKEKFGDVKPVLTIEEKELKAEE----------------AKTQGNAALSRQDYEGAAKLYREALQLSPHGPSSHIYHSNLAAALMYMGKYSEVIDHCEQSIALKPSYVKAYSRLGSAQVQLRDYDGAIDAYRRGLEVDSTNAACRDGLAEAERQRQQVQTTS 282          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A2R5GN66_9STRA (Tetratricopeptide repeat protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GN66_9STRA)

HSP 1 Score: 118 bits (295), Expect = 8.810e-26
Identity = 83/273 (30.40%), Postives = 136/273 (49.82%), Query Frame = 0
Query:   11 AVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQERE-------AMMQNPLFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--AKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESL 272
            AV++YLE  AGS +GA   V+++ +         GV+T+ A Q      E   L   F AG +  G VT  + +E       A+  +P F+ ++  +  K     AAE +PEY  +  +++A +  KFG  E                             A   K EGN+++K++ + +A  +YS+A+DLSP G N+HIY+ NRAAA  +L +++  +EDC  ++ L+P+Y +A+AR   A   +        +  +A+ELEP N A + +L
Sbjct:   11 AVLKYLEQTAGSDEGAKSAVAEVASKV------LGVETSSAQQG---GSEEVDLLKTFKAGCEKLG-VTLQKVQESTSAVDPAIEASPKFQNYLTRVKEKGYFGDAAEDSPEYKKKYERLVAKYMEKFGGAESASKASGAQETPASAVGDASAAGTNAEQEADKLKEEGNQFLKSKEYDRAVVSYSKAIDLSPAGSNTHIYYGNRAAAYLYLENFEGCLEDCTLAVTLNPSYARAHARASTAALRLGRTEEARKSAKRALELEPGNAAAQRTL 273          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A024UVB2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVB2_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.790e-25
Identity = 90/267 (33.71%), Postives = 135/267 (50.56%), Query Frame = 0
Query:    6 KAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVT----ALQEREAMMQNP-LFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNN 265
            K + F+V+++L  LA + DG   D  ++ AA  +L+ AF V+ +DAA  + L  +  +L  +F AG K+   VT    A  E   +  NP L++K++  + AK        GTPEYD    K ++ FK KFG+++                               KA GN  +  + + KAE  Y  A++LSP GPNSHIY  N AAA+ +L  +D  ++ C  SI L+P Y+KAY+R          XXXXXX   + +E +P+N
Sbjct:    9 KVLLFSVLEFLAPLA-TKDGV--DAIKVRAAVQSLQEAFHVNPSDAALKQRLGLKNYSLSDVFLAGAKSLQLVTSTTPAAAEDPVITANPGLWQKWLAKLDAKGFFNGVTSGTPEYDELYKKALSKFKEKFGSEKAAPPSLSKEEKEAKAE-------------TLKASGNAALSAKDYVKAEQLYLEAIELSPAGPNSHIYLSNLAAAQMYLEKYDDVIDICEKSIALNPKYVKAYSRXXXXXXXXXXXXXXXXXXNRGLEADPSN 259          
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Match: A0A662X6P5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6P5_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.410e-25
Identity = 95/308 (30.84%), Postives = 154/308 (50.00%), Query Frame = 0
Query:   39 ALKAAFGVDTADAAQAKELSYE-PATLDSIFAAGVKATGAVT--------ALQEREAMMQNP-LFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNNPAIMKMA 334
            ALK   GVD  +    ++++    A+ + +FAAG++A G  T        ++ E   ++++P L+KK+V  + +K     AA G+ E+  +  K +A FK KFG+ +                               KA GN  + ++ +  A A Y  AL LSP GP+SHIYH N AAA  +L  +   ++ C  SI L P+Y+KAY+R+G A   ++D      ++ + +E++  N A ++ L  AE KL+ +++  S+ + G P+ X   XX             XXXXX   L+NNPA+ +MA
Sbjct:   18 ALKTREGVDAENVDVGRQMAVNGSASFEEVFAAGLQALGLETGTAAVAEASVDEDPVVLKHPELWKKWVAKLESKGFFKGAAPGSSEHAARTTKALAKFKEKFGDVKPTAPVLSKAEKEAKAEE-------------VKARGNAALTSRDYAGAAALYREALQLSPDGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIALQPSYVKAYSRMGGAQVQLKDYDGAVDSFRRGLEVDSANAACRDGLADAERKLRQMQTTPSAASSG-PSQXAGGXXGMPDLSNLASMLGXXXXXLADLMNNPAMQQMA 311          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352096 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZH25_9STRA2.410e-218100.00SGTA_dimer domain-containing protein n=1 Tax=Tribo... [more]
A0A6H5J668_9PHAE3.670e-4545.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
I2CPK1_NANGC3.080e-3935.87Conserved tpr domain protein (Fragment) n=1 Tax=Na... [more]
A0A7S2FWT3_9STRA1.080e-3333.09Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A482RZ77_9ARCH3.770e-3233.33Tetratricopeptide repeat protein n=1 Tax=archaeon ... [more]
H3GML2_PHYRM1.730e-2933.84STI1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A0P1AE70_PLAHL6.280e-2630.45TPR repeat-containing protein n=1 Tax=Plasmopara h... [more]
A0A2R5GN66_9STRA8.810e-2630.40Tetratricopeptide repeat protein 1 n=1 Tax=Hondaea... [more]
A0A024UVB2_9STRA5.790e-2533.71Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A662X6P5_9STRA9.410e-2530.84Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..154
NoneNo IPR availableGENE3D1.10.260.100coord: 316..361
e-value: 1.9E-5
score: 26.5
NoneNo IPR availableGENE3D1.20.5.420Immunoglobulin FC, subunit Ccoord: 1..74
e-value: 6.5E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..165
NoneNo IPR availablePANTHERPTHR45831LD24721Pcoord: 4..439
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 232..265
score: 11.65223
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 161..194
e-value: 2.1
score: 17.3
coord: 198..231
e-value: 0.24
score: 20.5
coord: 232..265
e-value: 4.4E-9
score: 46.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 232..265
score: 14.720901
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 161..194
score: 9.4994
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 233..265
e-value: 6.1E-10
score: 38.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 153..310
e-value: 2.6E-33
score: 117.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 160..276
IPR032374SGTA, homodimerisation domainPFAMPF16546SGTA_dimercoord: 6..69
e-value: 8.6E-8
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_108contigContig_108:412078..420338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352096mRNA_15571Tribonema minus UTEX_B_3156 mRNAContig_108 412059..420572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352096|estExt_Genemark1.C_Ctg_1080035 ID=Trimin1|352096|estExt_Genemark1.C_Ctg_1080035|Name=jgi.p|Trimin1|352096|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=449bp
MAADPKAIAFAVVQYLEGLAGSSDGAVDDVSQLTAAATALKAAFGVDTAD
AAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVI
SAKAPLAAEGTPEYDVQMNKIIATFKTKFGNKEEEEEEEEADEEEEEEAE
DEVDPEAEAKAEAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIY
HCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDWEA
AVKAYTKAIELEPNNTANKESLKKAEAKLKAVRSASSSVARGAPAAGGAG
GMDMSALAGMLGGAGGGEGGLAGLLNNPAIMKMAQDPAVMKMAQGMMSNP
AMMAQMQQMMGGGGGGMPDMSALAGMMGGAGGAPGGMPPPPASGSRGAGI
QDDPEMMELQELMQREGPMAAMQKVGNNPRLQAKIMEMMQKGGMGGMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf
IPR032374SGTA_dimer