Trimin1|35206|CE35205_222 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|35206
Unique NameTrimin1|35206|CE35205_222
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length217
Homology
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A835Z4W5_9STRA (Putative RNA binding protein Tma22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W5_9STRA)

HSP 1 Score: 377 bits (968), Expect = 2.110e-131
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query:    1 ADVDAGSRPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFGIPAERISIVGE 216
            ADVDAGSRPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFGIPAERISIVGE
Sbjct:    1 ADVDAGSRPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFGIPAERISIVGE 216          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A6H5K9G4_9PHAE (SUI1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9G4_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.280e-39
Identity = 100/204 (49.02%), Postives = 123/204 (60.29%), Query Frame = 0
Query:   11 PQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFGIPAERISIV 214
            P TV+YCGVC LP EYC YG   +   C+AWAE NCP+      + + GL+V  +     EG E      XXXXXXXXXXXX                       R A+         E  V IGR+SRN+RKF+T+VGGL  FP VK+KDAAK++G+QFACG SV+K  SGAEE+ IQGDVL DLPGFLE+   IPA +IS++
Sbjct:   33 PLTVIYCGVCGLPPEYCEYGSTGE--ACRAWAEANCPEVL-AIEEGIAGLEVQGD-----EGGEAXXXXXXXXXXXXXXXXXGKKV-------------------RIAKPGXXXXXXXEQRVVIGRLSRNRRKFVTVVGGLDTFPDVKIKDAAKKIGKQFACGSSVSKAPSGAEEVVIQGDVLMDLPGFLETTLNIPAAKISVL 209          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A7S1G6N5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6N5_9STRA)

HSP 1 Score: 100 bits (250), Expect = 6.350e-24
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0
Query:  129 EPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFGIPAERI 211
            EP V I R  RNKRK++TIV GL AFP +KLK AAK MG++F+CGCSV   A+G ++I IQGDV  D+P  L   FG+P ERI
Sbjct:   16 EPKVVISRKERNKRKYVTIVTGLDAFPSIKLKAAAKTMGKKFSCGCSVQNMATGGKQIDIQGDVQGDVPRILVEQFGVPLERI 98          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A0D6R9F6_ARACU (Translation machinery-associated protein 22 n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R9F6_ARACU)

HSP 1 Score: 100 bits (250), Expect = 5.290e-23
Identity = 76/217 (35.02%), Postives = 112/217 (51.61%), Query Frame = 0
Query:    8 RPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPD-------QTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAF-GIPAERISIVGE 216
            +P P  VLYC VC+LP EYC +GP  ++  CK W  +N P        + E  A++LEGLK+S        G + +++A                         T + ++ +E KR      KKK  PE  V I +V RNKRK +TIV GL  F  +KL DA+K++G++FA G SV K  +  E+I +QGD+LY++  F+   +  +P   I  + E
Sbjct:    4 KPQPVKVLYCPVCSLPAEYCEFGPDFEK--CKPWLIQNAPHLYPDLLKEAEKTAEQLEGLKIS--------GDQNDSSAP------------------------TGSASKQEEVKRLPGGKIKKKEKPE--VVIEKVVRNKRKSVTIVKGLDMFG-IKLSDASKKLGKKFASGASVVKGPTEKEQIDVQGDILYEIVDFITETWPSVPQNAIYFIEE 183          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: N1QGE6_SPHMS (Translation machinery-associated protein 22 n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QGE6_SPHMS)

HSP 1 Score: 98.6 bits (244), Expect = 4.390e-22
Identity = 74/204 (36.27%), Postives = 102/204 (50.00%), Query Frame = 0
Query:   11 PQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFGIPAERISIV 214
            P+ +LYCGVCTLP EYC +G   ++  C+ W   N P      +Q      +SAN    +  A+  A                     E      AA AE  E + A ++A  K       + I RV RNKRK++T + GL AF  ++LK  AK+ G++FA G SV KTASG EEIT+QGDV  D+  +L     +P + + IV
Sbjct:   13 PRNILYCGVCTLPPEYCEFGGTTKK--CEEWLSTNAPTLH---SQLYSEAALSANLSTLSVDAQKRA---------------------EKDAQKKAAKAEAAEARDAEKRATSK-------IIIKRVERNKRKYVTEIQGLEAFG-LELKKVAKEFGKKFATGSSVTKTASGGEEITVQGDVAEDVAEWLADTGKVPEDNVEIV 182          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A2I2G6R7_9EURO (Translation machinery-associated protein 22 (Fragment) n=2 Tax=Aspergillus TaxID=5052 RepID=A0A2I2G6R7_9EURO)

HSP 1 Score: 97.4 bits (241), Expect = 1.160e-21
Identity = 76/220 (34.55%), Postives = 107/220 (48.64%), Query Frame = 0
Query:    8 RPTP-----QTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPD------QTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFG--IPAERISIV 214
            +PTP     + V+YCGVCTLP EYC +G  A++  C+ W ++N PD        E  +  L  L VS     A + A+ EA A                                 E + A RKA  K       V I RV RNKRK ++++ GL  +  ++ K  AK++G++FA G SV K+A+G EEIT+QGDV  D+  +L   +G  IP   I I+
Sbjct:    6 QPTPAEFQAKHVVYCGVCTLPAEYCEFGGTAKK--CEEWVKDNHPDVYQQLYSEEALSSNLSNLSVSVRERAAKDAAKKEAKAALA------------------------------EARDAERKAASK-------VHIKRVERNKRKHVSVITGLEVYG-LENKKVAKELGKKFATGSSVTKSAAGTEEITVQGDVSDDVKDWLLEVYGKEIPEANIEII 185          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A9NME9_PICSI (Translation machinery-associated protein 22 n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NME9_PICSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.710e-21
Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 0
Query:    8 RPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPD----------QTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAF-GIPAERISIV 214
            +P P  VLYC VCTLP EYC +GP  ++  CK W  +N P           + E   +KL+G+++S +    A+   P  + +                               +E KR      KKK  PE  V + +V RNKRK +TIV GL  F  +KL DA+K++G++FA G SV K  +  E+I +QGD+LYD+  F+   +  +P   I  +
Sbjct:    4 KPRPVQVLYCAVCTLPAEYCEFGPDFEK--CKPWVIQNAPHLYPDLVKADKEAEKTGEKLQGMQISGDQ---ADSTAPAGSVSKQ-----------------------------EEVKRLPGGKIKKKEKPE--VVVEKVVRNKRKCVTIVKGLDMFG-IKLSDASKKLGKKFASGASVVKGPTEKEQIDVQGDILYDIVEFITETWPNVPENAIYFI 184          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A1B8G7S0_9PEZI (Translation machinery-associated protein 22 n=13 Tax=Pseudogymnoascus TaxID=78156 RepID=A0A1B8G7S0_9PEZI)

HSP 1 Score: 96.7 bits (239), Expect = 2.700e-21
Identity = 75/211 (35.55%), Postives = 105/211 (49.76%), Query Frame = 0
Query:    8 RPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEG--AAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFG--IPAERISIV 214
             P  + ++YCGVCTLP EYC +G   ++  CK W EEN PD +E   +A  LE    + + +      +  A                     +AA  A A      E K A+  A  +       + I RV RNKRK++T V GL AF  ++LK  +K  G++FA G SV KTASG EEI +QGDV  ++  FL   +G  +P + I +V
Sbjct:   10 EPQARHIVYCGVCTLPPEYCEFGGTTKK--CKEWLEENHPDMSEKIYSADALEAATSTLSIDALKRATKDSA--------------------KKAAXAAQA------EQKHASALAASR-------IIIKRVERNKRKYVTAVSGLEAFG-LELKKVSKDFGKKFATGSSVTKTASGGEEIVVQGDVSTEIEDFLLEKYGDLVPGDNIELV 184          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A0D2E023_9EURO (Translation machinery-associated protein 22 n=10 Tax=Herpotrichiellaceae TaxID=43219 RepID=A0A0D2E023_9EURO)

HSP 1 Score: 96.7 bits (239), Expect = 2.700e-21
Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 0
Query:    5 AGSRPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQTEGA-AQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAFG-IPAERISI 213
            A + P  + V+YCGVCTLP EYC +G   ++  C  W E+N PD  +   +++     +SA +  A + AE +AA                         A AA AE  E +R A          E +V I RV RNKRK++T+V GL     + LK  AK++G++FA G SV KTA+G EEIT+QGDV  DL  +L   +  IP + + +
Sbjct:   15 AAAGPAARKVVYCGVCTLPPEYCEFGGTVKK--CAEWLEKNHPDMHQKLYSEEALNANLSALSVDAQKRAEKDAAKKT----------------------AKAAAAEQREAERKA----------EAIVLIKRVERNKRKYVTVVSGLEEHG-LDLKKVAKELGKKFATGSSVTKTAAGGEEITVQGDVSDDLYDWLLEKYPEIPEDNLDM 190          
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Match: A0A200QD80_9MAGN (Translation machinery-associated protein 22 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QD80_9MAGN)

HSP 1 Score: 96.3 bits (238), Expect = 3.880e-21
Identity = 77/220 (35.00%), Postives = 112/220 (50.91%), Query Frame = 0
Query:    8 RPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPD------------QTEGAAQKLEGLKVSANAEGAAEGAEPEAAATXXXXXXXXXXXXXXXXXXEAAGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGGLGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFLESAF-GIPAERISIV 214
            +P P  VLYCGVC+LP EYC +GP  ++  CK W  EN PD            + +  +++L+ + +S+++   A+GA P  +                        DAT+   E  E KR      KKK   E  V I +V RNKRK +TIV GL  F  VKL DA+K++G++FA G SV K  +  E+I +QGD+ YD+  F+   +  +P   I  +
Sbjct:    4 KPQPVKVLYCGVCSLPAEYCEFGPDFEK--CKPWLLENAPDLYPDLLKEANGKEADKVSEQLQSVGISSSS---ADGAVPATST-----------------------DATSTSKE--EVKRLPGGKMKKKDKKE--VVIEKVVRNKRKCVTIVKGLDLFG-VKLSDASKKLGKKFASGASVVKGPTEKEQIDVQGDISYDIVEFITETWPDVPESAIYFI 190          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|35206 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4W5_9STRA2.110e-131100.00Putative RNA binding protein Tma22 n=1 Tax=Tribone... [more]
A0A6H5K9G4_9PHAE1.280e-3949.02SUI1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S1G6N5_9STRA6.350e-2459.04Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0D6R9F6_ARACU5.290e-2335.02Translation machinery-associated protein 22 n=2 Ta... [more]
N1QGE6_SPHMS4.390e-2236.27Translation machinery-associated protein 22 n=1 Ta... [more]
A0A2I2G6R7_9EURO1.160e-2134.55Translation machinery-associated protein 22 (Fragm... [more]
A9NME9_PICSI1.710e-2133.03Translation machinery-associated protein 22 n=1 Ta... [more]
A0A1B8G7S0_9PEZI2.700e-2135.55Translation machinery-associated protein 22 n=13 T... [more]
A0A0D2E023_9EURO2.700e-2136.49Translation machinery-associated protein 22 n=10 T... [more]
A0A200QD80_9MAGN3.880e-2135.00Translation machinery-associated protein 22 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.780.10coord: 99..215
e-value: 2.1E-17
score: 65.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..131
NoneNo IPR availablePANTHERPTHR12789:SF0DENSITY-REGULATED PROTEINcoord: 10..214
NoneNo IPR availablePANTHERPTHR12789DENSITY-REGULATED PROTEIN HOMOLOGcoord: 10..214
NoneNo IPR availableCDDcd11607DENR_Ccoord: 130..215
e-value: 1.36711E-34
score: 116.503
IPR001950SUI1 domainPFAMPF01253SUI1coord: 129..207
e-value: 1.0E-17
score: 64.4
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 132..204
score: 17.058491
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 119..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:404557..406795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|35206mRNA_5491Tribonema minus UTEX_B_3156 mRNAContig_19 404557..406844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|35206|CE35205_222 ID=Trimin1|35206|CE35205_222|Name=jgi.p|Trimin1|35206|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
ADVDAGSRPTPQTVLYCGVCTLPLEYCSYGPPAQQPLCKAWAEENCPDQT
EGAAQKLEGLKVSANAEGAAEGAEPEAAATSGGRGDDGGGGDQTSAAGEA
AGDATAAGAEGDEPKRAARKAPKKKAAPEPMVKIGRVSRNKRKFITIVGG
LGAFPHVKLKDAAKQMGRQFACGCSVNKTASGAEEITIQGDVLYDLPGFL
ESAFGIPAERISIVGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001950SUI1
IPR036877SUI1_dom_sf