Trimin1|351718|estExt_Genemark1.C_Ctg_980039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351718
Unique NameTrimin1|351718|estExt_Genemark1.C_Ctg_980039
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length763
Homology
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BLAST of jgi.p|Trimin1|351718 vs. uniprot
Match: A0A835YG99_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG99_9STRA)

HSP 1 Score: 960 bits (2482), Expect = 0.000e+0
Identity = 762/762 (100.00%), Postives = 762/762 (100.00%), Query Frame = 0 
Query:    1 MTHRDANLYGILGIEPNATAEDIRRAYLAKARACHPNITSALNDARRNHVCRRGSVAXXXXXXXXXXXXXXAPHRAXXXXXXXXXXXXXXXAPHAAEAFKRVAHAHETLSHPLRRARYDEAHAGGGMSSGAHYTYPRGSGYGGYAAGGEDLRGFAGRASAARGSAAECAHDWAHAGGGMSSGAHYPYPRGSYSGYTGRGPAGVRWQGLRCQSGGYGGSYAAGGEDLRSSRAGPPLPEARALRGARASRSSASAFNALDVFVHPRFIASCXXXXXXXXXXXXXXXXXMFGVLPLLLLGGGLVGGLLSTDDGATKRAPQGDKVPAWFNPASQRWETPSPWDPRYRAQLARNPEQMVAPVAAAATATGAXXXXXXXVTGAFAXXXXXXXXXXXXAGSSGTCLPTPPLLPALALPLPQGCRSQLQWHLPXXXXXXXXXXPQGAPAVTSVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSLCRHCDGVFDDDSKMIDSFISRGALGTALVAALRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRASKAAALRVFIGCSALSWVQGSSAQAADGSAAQPAHLRGLCLQWSVAAAKSSVNINSGARNAPARGTPNSSAPRANHTGMQQMAARTAHRRRCVRAAADASRNLKAAARLCKAGARSFRNRIPPVRSVS 762
            MTHRDANLYGILGIEPNATAEDIRRAYLAKARACHPNITSALNDARRNHVCRRGSVAXXXXXXXXXXXXXXAPHRAXXXXXXXXXXXXXXXAPHAAEAFKRVAHAHETLSHPLRRARYDEAHAGGGMSSGAHYTYPRGSGYGGYAAGGEDLRGFAGRASAARGSAAECAHDWAHAGGGMSSGAHYPYPRGSYSGYTGRGPAGVRWQGLRCQSGGYGGSYAAGGEDLRSSRAGPPLPEARALRGARASRSSASAFNALDVFVHPRFIASCXXXXXXXXXXXXXXXXXMFGVLPLLLLGGGLVGGLLSTDDGATKRAPQGDKVPAWFNPASQRWETPSPWDPRYRAQLARNPEQMVAPVAAAATATGAXXXXXXXVTGAFAXXXXXXXXXXXXAGSSGTCLPTPPLLPALALPLPQGCRSQLQWHLPXXXXXXXXXXPQGAPAVTSVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSLCRHCDGVFDDDSKMIDSFISRGALGTALVAALRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRASKAAALRVFIGCSALSWVQGSSAQAADGSAAQPAHLRGLCLQWSVAAAKSSVNINSGARNAPARGTPNSSAPRANHTGMQQMAARTAHRRRCVRAAADASRNLKAAARLCKAGARSFRNRIPPVRSVS
Sbjct:    1 MTHRDANLYGILGIEPNATAEDIRRAYLAKARACHPNITSALNDARRNHVCRRGSVAXXXXXXXXXXXXXXAPHRAXXXXXXXXXXXXXXXAPHAAEAFKRVAHAHETLSHPLRRARYDEAHAGGGMSSGAHYTYPRGSGYGGYAAGGEDLRGFAGRASAARGSAAECAHDWAHAGGGMSSGAHYPYPRGSYSGYTGRGPAGVRWQGLRCQSGGYGGSYAAGGEDLRSSRAGPPLPEARALRGARASRSSASAFNALDVFVHPRFIASCXXXXXXXXXXXXXXXXXMFGVLPLLLLGGGLVGGLLSTDDGATKRAPQGDKVPAWFNPASQRWETPSPWDPRYRAQLARNPEQMVAPVAAAATATGAXXXXXXXVTGAFAXXXXXXXXXXXXAGSSGTCLPTPPLLPALALPLPQGCRSQLQWHLPXXXXXXXXXXPQGAPAVTSVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSLCRHCDGVFDDDSKMIDSFISRGALGTALVAALRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRASKAAALRVFIGCSALSWVQGSSAQAADGSAAQPAHLRGLCLQWSVAAAKSSVNINSGARNAPARGTPNSSAPRANHTGMQQMAARTAHRRRCVRAAADASRNLKAAARLCKAGARSFRNRIPPVRSVS 762
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351718 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YG99_9STRA0.000e+0100.00J domain-containing protein n=1 Tax=Tribonema minu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 77..92
score: 39.79
coord: 9..27
score: 43.05
coord: 94..114
score: 35.85
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 64..114
e-value: 7.6E-4
score: 28.8
coord: 6..47
e-value: 0.05
score: 17.1
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 75..119
e-value: 4.9E-10
score: 39.4
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 7..122
score: 14.530306
IPR001623DnaJ domainCDDcd06257DnaJcoord: 7..110
e-value: 4.25843E-10
score: 53.7033
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 1..50
e-value: 2.2E-7
score: 32.7
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 73..132
e-value: 5.1E-12
score: 47.7
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 5..39
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 75..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..712
NoneNo IPR availablePANTHERPTHR44240DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATEDcoord: 76..477
coord: 6..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:345805..355520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351718mRNA_14915Tribonema minus UTEX_B_3156 mRNAContig_98 345805..355588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351718|estExt_Genemark1.C_Ctg_980039 ID=Trimin1|351718|estExt_Genemark1.C_Ctg_980039|Name=jgi.p|Trimin1|351718|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=763bp
MTHRDANLYGILGIEPNATAEDIRRAYLAKARACHPNITSALNDARRNHV
CRRGSVAYLAKARACHPDVSSAPHRAYLAKARACHPDVNGGAPHAAEAFK
RVAHAHETLSHPLRRARYDEAHAGGGMSSGAHYTYPRGSGYGGYAAGGED
LRGFAGRASAARGSAAECAHDWAHAGGGMSSGAHYPYPRGSYSGYTGRGP
AGVRWQGLRCQSGGYGGSYAAGGEDLRSSRAGPPLPEARALRGARASRSS
ASAFNALDVFVHPRFIASCSSASAFNALDVFMHPRFMFGVLPLLLLGGGL
VGGLLSTDDGATKRAPQGDKVPAWFNPASQRWETPSPWDPRYRAQLARNP
EQMVAPVAAAATATGAAAAAATAVTGAFAAVADTAITGAIAAGSSGTCLP
TPPLLPALALPLPQGCRSQLQWHLPMLPLLALPLPPQGAPAVTSVAAAAT
AASASAATATAAAATNGAAAAAPATAVAAAAAAAGASGAVAAAAATSTAL
PAAAGAAAAAPSSLCRHCDGVFDDDSKMIDSFISRGALGTALVAALRAAA
AVAATHAAANAASAADDGSAAAAAAAAAALTMARGQQDSAALTAAARVDT
DAAVAAAAAAAAAAAAALPSAAACPSGECCCSRASKAAALRVFIGCSALS
WVQGSSAQAADGSAAQPAHLRGLCLQWSVAAAKSSVNINSGARNAPARGT
PNSSAPRANHTGMQQMAARTAHRRRCVRAAADASRNLKAAARLCKAGARS
FRNRIPPVRSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf