Trimin1|351705|estExt_Genemark1.C_Ctg_980022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351705
Unique Name	Trimin1\|351705\|estExt_Genemark1.C_Ctg_980022
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1111

Homology

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BLAST of jgi.p|Trimin1|351705 vs. uniprot
Match: A0A835YGK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGK7_9STRA)

HSP 1 Score: 1619 bits (4192), Expect = 0.000e+0
Identity = 1110/1110 (100.00%), Postives = 1110/1110 (100.00%), Query Frame = 0

Query:    1 MTASLVDPPPVQAVAAAPGSSGAQTPASRVPAELRLLTIAFNAPCTPSDSDKPRHRMRRDFLTPTFASDRPKSAQPRTPAAAPALPDEGNDGLFGQNAMAATAAATAPALQQGDWNNMMQRTLGTLLCTDPRERAVRVLAYNRHADAAGRAMCTVKVPPLRLDVPCSLLHGDDRADDSAHANECEACQEDVAAARARXXXXXXXXXXXXXXXXXXXXXXXXDECPRAYCGACLCARGAAVPREALPLRRDAATGLLRAGAPLMVKERPSARAWTEGAFEXXXXXXXXXXXXXXXXXXXXXXXXXVHSGCYFRDATAQQKAALLRRYRDADFVPEDQIYECYFKTRAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPETAGAQLQLFSVSWAMGDVQESWEAWRCVACAEDADALARAEGAVRDAAIGDRDGLALPKAGAAXXXXXXXXXXASRGPYLSADAMVNGKPLDVTSAERLRATPAAGAGGAPTDLHAKYARARARRVETCCERLHEASCAPPWVVFELCAGSGAGAAAARRAGLNVXXXXXXXXXXRATSFVENDADCYCLLCFPPRCAXXXXXXXXXXXXXLSARYEGTCFDSEGDVCDIEQDFYRTVWAFIARVNADWAARKYGQYHPKTKKFIPFTVDPARVLYVVGPPCNDFDTVNARAGGVASVGYSXXXXXXXXXXXXXRVWSACAHIKTLLESLFEHLVVVFENVSNMREATRVALISQVHLPKYMLNGADWCIAMRSRMFLCNVALRALEPYQWAAFWPKDFVQDCYALMAXXXXXXXXXXQSPGATCRVMKAPTMMATSISGKAASAGYIIDVTDACDRGQHAGAVRRRGSSXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXGEGYVRALSLAEYPADFVKIRRPGATEAAALDGVRELSDAAQCRILGNSFNVSLVAFLLRDVAESEGIVWRDWLSQGAAPGTEWFTTHSVTRETLERRRRAALIDASRALSRNAIRDDPALAAAIAEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPQRPGKRRKKYRGGQGRE 1110
            MTASLVDPPPVQAVAAAPGSSGAQTPASRVPAELRLLTIAFNAPCTPSDSDKPRHRMRRDFLTPTFASDRPKSAQPRTPAAAPALPDEGNDGLFGQNAMAATAAATAPALQQGDWNNMMQRTLGTLLCTDPRERAVRVLAYNRHADAAGRAMCTVKVPPLRLDVPCSLLHGDDRADDSAHANECEACQEDVAAARARXXXXXXXXXXXXXXXXXXXXXXXXDECPRAYCGACLCARGAAVPREALPLRRDAATGLLRAGAPLMVKERPSARAWTEGAFEXXXXXXXXXXXXXXXXXXXXXXXXXVHSGCYFRDATAQQKAALLRRYRDADFVPEDQIYECYFKTRAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPETAGAQLQLFSVSWAMGDVQESWEAWRCVACAEDADALARAEGAVRDAAIGDRDGLALPKAGAAXXXXXXXXXXASRGPYLSADAMVNGKPLDVTSAERLRATPAAGAGGAPTDLHAKYARARARRVETCCERLHEASCAPPWVVFELCAGSGAGAAAARRAGLNVXXXXXXXXXXRATSFVENDADCYCLLCFPPRCAXXXXXXXXXXXXXLSARYEGTCFDSEGDVCDIEQDFYRTVWAFIARVNADWAARKYGQYHPKTKKFIPFTVDPARVLYVVGPPCNDFDTVNARAGGVASVGYSXXXXXXXXXXXXXRVWSACAHIKTLLESLFEHLVVVFENVSNMREATRVALISQVHLPKYMLNGADWCIAMRSRMFLCNVALRALEPYQWAAFWPKDFVQDCYALMAXXXXXXXXXXQSPGATCRVMKAPTMMATSISGKAASAGYIIDVTDACDRGQHAGAVRRRGSSXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXGEGYVRALSLAEYPADFVKIRRPGATEAAALDGVRELSDAAQCRILGNSFNVSLVAFLLRDVAESEGIVWRDWLSQGAAPGTEWFTTHSVTRETLERRRRAALIDASRALSRNAIRDDPALAAAIAEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPQRPGKRRKKYRGGQGRE
Sbjct:    1 MTASLVDPPPVQAVAAAPGSSGAQTPASRVPAELRLLTIAFNAPCTPSDSDKPRHRMRRDFLTPTFASDRPKSAQPRTPAAAPALPDEGNDGLFGQNAMAATAAATAPALQQGDWNNMMQRTLGTLLCTDPRERAVRVLAYNRHADAAGRAMCTVKVPPLRLDVPCSLLHGDDRADDSAHANECEACQEDVAAARARXXXXXXXXXXXXXXXXXXXXXXXXDECPRAYCGACLCARGAAVPREALPLRRDAATGLLRAGAPLMVKERPSARAWTEGAFEXXXXXXXXXXXXXXXXXXXXXXXXXVHSGCYFRDATAQQKAALLRRYRDADFVPEDQIYECYFKTRAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPETAGAQLQLFSVSWAMGDVQESWEAWRCVACAEDADALARAEGAVRDAAIGDRDGLALPKAGAAXXXXXXXXXXASRGPYLSADAMVNGKPLDVTSAERLRATPAAGAGGAPTDLHAKYARARARRVETCCERLHEASCAPPWVVFELCAGSGAGAAAARRAGLNVXXXXXXXXXXRATSFVENDADCYCLLCFPPRCAXXXXXXXXXXXXXLSARYEGTCFDSEGDVCDIEQDFYRTVWAFIARVNADWAARKYGQYHPKTKKFIPFTVDPARVLYVVGPPCNDFDTVNARAGGVASVGYSXXXXXXXXXXXXXRVWSACAHIKTLLESLFEHLVVVFENVSNMREATRVALISQVHLPKYMLNGADWCIAMRSRMFLCNVALRALEPYQWAAFWPKDFVQDCYALMAXXXXXXXXXXQSPGATCRVMKAPTMMATSISGKAASAGYIIDVTDACDRGQHAGAVRRRGSSXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXGEGYVRALSLAEYPADFVKIRRPGATEAAALDGVRELSDAAQCRILGNSFNVSLVAFLLRDVAESEGIVWRDWLSQGAAPGTEWFTTHSVTRETLERRRRAALIDASRALSRNAIRDDPALAAAIAEAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPQRPGKRRKKYRGGQGRE 1110

[Close]

BLAST of jgi.p|Trimin1|351705 vs. uniprot
Match: A0A835Z8P9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8P9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.280e-12
Identity = 44/81 (54.32%), Postives = 47/81 (58.02%), Query Frame = 0

Query:  981 VAFLLRDVAESEGIVWRDWLSQGAAPGTE--------------------------------WFTTHSVTRETLERRRRAAL 1029
            +AFLLRDVAESEGIVWR WL+QGAAPGTE                                WFTTH+VTRETLE RRRAAL
Sbjct:    1 MAFLLRDVAESEGIVWRPWLAQGAAPGTECXXXXXXXXXXXXXXXXXXXDWLSQGAAFVTEWFTTHNVTRETLEHRRRAAL 81

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351705 vs. uniprot

BLAST of jgi.p|Trimin1|351705 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YGK7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z8P9_9STRA	8.280e-12	54.32	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1047..1074
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1084..1110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 898..923
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 872..923
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..393
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 553..823 e-value: 7.8E-10 score: 40.8
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 554..986

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_98	contig	Contig_98:214026..228827 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351705	mRNA_14901	Tribonema minus UTEX_B_3156	mRNA	Contig_98 214026..229193 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351705|estExt_Genemark1.C_Ctg_980022 ID=Trimin1|351705|estExt_Genemark1.C_Ctg_980022|Name=jgi.p|Trimin1|351705|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1111bp
MTASLVDPPPVQAVAAAPGSSGAQTPASRVPAELRLLTIAFNAPCTPSDS
DKPRHRMRRDFLTPTFASDRPKSAQPRTPAAAPALPDEGNDGLFGQNAMA
ATAAATAPALQQGDWNNMMQRTLGTLLCTDPRERAVRVLAYNRHADAAGR
AMCTVKVPPLRLDVPCSLLHGDDRADDSAHANECEACQEDVAAARARRDD
CEACQEDVAAARARRDDVYMCDECPRAYCGACLCARGAAVPREALPLRRD
AATGLLRAGAPLMVKERPSARAWTEGAFERPSARAWTEGAFERPSARAWT
EGAFVHSGCYFRDATAQQKAALLRRYRDADFVPEDQIYECYFKTRAPPTA
AAAAAAAASNHPPLSAPLPMLTAPPPAAEHAAPAAGAKRKQRAATRGSTA
AAAAVAAAAAPETAGAQLQLFSVSWAMGDVQESWEAWRCVACAEDADALA
RAEGAVRDAAIGDRDGLALPKAGAADGLALPKAGVASRGPYLSADAMVNG
KPLDVTSAERLRATPAAGAGGAPTDLHAKYARARARRVETCCERLHEASC
APPWVVFELCAGSGAGAAAARRAGLNVGAVRRAGLNVRATSFVENDADCY
CLLCFPPRCATFFVENDADCYRLLSARYEGTCFDSEGDVCDIEQDFYRTV
WAFIARVNADWAARKYGQYHPKTKKFIPFTVDPARVLYVVGPPCNDFDTV
NARAGGVASVGYSVNARAGGVAPVGYRVWSACAHIKTLLESLFEHLVVVF
ENVSNMREATRVALISQVHLPKYMLNGADWCIAMRSRMFLCNVALRALEP
YQWAAFWPKDFVQDCYALMAAFWPEDFVQDQSPGATCRVMKAPTMMATSI
SGKAASAGYIIDVTDACDRGQHAGAVRRRGSSSGGGGSGGGNSGGGGGGG
SGSGSANSGGGGGGGGSGSSGGNGSGGEGYVRALSLAEYPADFVKIRRPG
ATEAAALDGVRELSDAAQCRILGNSFNVSLVAFLLRDVAESEGIVWRDWL
SQGAAPGTEWFTTHSVTRETLERRRRAALIDASRALSRNAIRDDPALAAA
IAEAREQQAAAAAAKAKAAKLEAATAAAAAAAAAAAAAASAEPQRPGKRR
KKYRGGQGRE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases_sf