Trimin1|351688|estExt_Genemark1.C_Ctg_970043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351688
Unique NameTrimin1|351688|estExt_Genemark1.C_Ctg_970043
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length482
Homology
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A835YIB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIB6_9STRA)

HSP 1 Score: 748 bits (1931), Expect = 2.700e-269
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0
Query:    1 MRHEEIPQVRRARPGNPAGRAVKAVPGQARSARAHTEARQSFMASADGGVGASLTEPKLFFTVAGVDVGAMTQSLEQRSRCLASLVRTAETSLYLAAPMMAASHLLTVCRRSLRRVGARPAELEGDADEASADAAAALSTXXXXXXXXXXXXARLSGGGRGGRGPPAARGGAGSGVAVHGRSDARSAVLATVETALEASLLVAFVWAWSAASARVVAAVSPKMDAASADALATGLGLMAWGAVVFGSGFLSVLPGRYREKCSAAASLXXXXXXXXXXXXXXXXVQALSVDYPLQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNKGRP 481
            MRHEEIPQVRRARPGNPAGRAVKAVPGQARSARAHTEARQSFMASADGGVGASLTEPKLFFTVAGVDVGAMTQSLEQRSRCLASLVRTAETSLYLAAPMMAASHLLTVCRRSLRRVGARPAELEGDADEASADAAAALSTXXXXXXXXXXXXARLSGGGRGGRGPPAARGGAGSGVAVHGRSDARSAVLATVETALEASLLVAFVWAWSAASARVVAAVSPKMDAASADALATGLGLMAWGAVVFGSGFLSVLPGRYREKCSAAASLXXXXXXXXXXXXXXXXVQALSVDYPLQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNKGRP
Sbjct:    1 MRHEEIPQVRRARPGNPAGRAVKAVPGQARSARAHTEARQSFMASADGGVGASLTEPKLFFTVAGVDVGAMTQSLEQRSRCLASLVRTAETSLYLAAPMMAASHLLTVCRRSLRRVGARPAELEGDADEASADAAAALSTXXXXXXXXXXXXARLSGGGRGGRGPPAARGGAGSGVAVHGRSDARSAVLATVETALEASLLVAFVWAWSAASARVVAAVSPKMDAASADALATGLGLMAWGAVVFGSGFLSVLPGRYREKCSAAASLXXXXXXXXXXXXXXXXVQALSVDYPLQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNKGRP 481          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: D8LDV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDV9_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 2.050e-25
Identity = 91/290 (31.38%), Postives = 124/290 (42.76%), Query Frame = 0
Query:  182 SDARSAVLATVETALEASLLVAFVWAWSAASARVVAAVSPKMDAASADALATGLGLMAWGAVVFGSGFLSVLPGRYREKCSAAASLXXXXXXXXXXXXXXXXVQALSVDYPLQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTV 471
            SD    V A VETALE+ L+V FV A    +AR ++    K    +  AL        W A VF SG  +  P ++ EK                        Q  ++D P+ K+WY  LRKPRW PP++VFP+ WIPLK +Q+FA   +WDKL         S +  PV ++ V K++GD WNKV+F R +L +G  V+  Y++                                                   L A +  FF     A YL APT  WV++AT L V
Sbjct:   91 SDTVVLVEALVETALESGLIVGFVGAAEYLAARYLS--DTKFSEVARLAL--------WTAAVFVSGAATAGPKKWLEKS-----------------------QLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLET------RSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLT--------------------------------------------------LLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQV 291          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A7S3VHW3_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VHW3_DUNTE)

HSP 1 Score: 98.2 bits (243), Expect = 2.380e-20
Identity = 57/186 (30.65%), Postives = 87/186 (46.77%), Query Frame = 0
Query:  296 NWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNKGRP 481
            NWY+ + +P+WTPP++VFP+ WIPLKT+Q  A +++W +   GK+L+       P+ LF V+  +G+ WN V+F RH++   V  +G +W                                                  A +  T A+F    R A Y++ PTL WVS+A  L V + +LN G P
Sbjct:   35 NWYKTILRPKWTPPNYVFPLMWIPLKTIQSIAAAMVWRQ-GHGKELL------LPLGLFGVHLLLGNWWNVVFFSRHKMNESVKWMGLFW--------------------------------------------------ASIAGTAAAFAPISRPAAYMMLPTLAWVSVAWKLNVDIVRLNMGGP 163          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A8IE17_CHLRE (TspO/MBR-related protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8IE17_CHLRE)

HSP 1 Score: 93.6 bits (231), Expect = 9.750e-19
Identity = 59/188 (31.38%), Postives = 86/188 (45.74%), Query Frame = 0
Query:  293 LQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNKGR 480
            +   WY+ L+KP WTPP++VFP+ WIPLKTMQ  AL L+  K    K +   S L  P+A F ++  +G+ WN V+FGR QL   +  + A+W                                                    + A+ A+F+     A YL+ PT VWV++AT L   + Q+NKG+
Sbjct:   38 MDPTWYKSLKKPSWTPPNYVFPLVWIPLKTMQSVALWLVCSK---AKSV---SSLALPLAAFGIHMFLGNWWNVVFFGRRQLEGSLPWMYAFW--------------------------------------------------GSIAASAAAFYPISPVAAYLMLPTQVWVTIATKLNWDIVQINKGK 169          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A150H3I1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3I1_GONPE)

HSP 1 Score: 91.3 bits (225), Expect = 6.120e-18
Identity = 53/182 (29.12%), Postives = 79/182 (43.41%), Query Frame = 0
Query:  296 NWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLN 477
             WY+ L+KP+WTPP++VFP+ WIPLK MQ  AL L+W K P  + L        P+    V+  +G+ WN V+FG+ +L   +  +  +W                                                  A +  T A+F+     A YL+ PT +WVS+AT L   + +LN
Sbjct:   41 TWYKALKKPKWTPPNYVFPLVWIPLKLMQSVALWLVWTKAPSARALA------FPLTAMAVHMGLGNWWNVVFFGQRKLKESLPWMYTFW--------------------------------------------------ASIAVTAAAFYPVSPAAAYLMVPTQIWVSIATKLNWDIVKLN 166          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A2P6TZX4_CHLSO (Tryptophan-rich sensory n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TZX4_CHLSO)

HSP 1 Score: 90.5 bits (223), Expect = 2.050e-17
Identity = 58/187 (31.02%), Postives = 85/187 (45.45%), Query Frame = 0
Query:  294 QKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNKGR 480
            +K WY+ L KP WTPP++VFP+ WIPLK +Q  +L L+W     GK       L  P++LF ++  +G+ WN V+FG+H+L      +GA+W                                                  A + A++A+F      A  L APT VWV++A  L   + QLNKG+
Sbjct:   51 EKGWYQKLVKPSWTPPNYVFPLVWIPLKILQSVSLWLVWRS---GKDA---GELALPLSLFGLHLFLGNWWNVVFFGQHKLEESTKWMGAFW--------------------------------------------------ASIAASIAAFAQVTPLAALLFAPTQVWVTIAAKLNWDIVQLNKGQ 181          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: E1ZHH7_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHH7_CHLVA)

HSP 1 Score: 88.6 bits (218), Expect = 2.100e-17
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  297 WYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSV 392
            WY  L KP WTPP++VFP  WIPLK +Q  A  L+W   P  ++L        P+ALFV +  +G  WN V+FGRHQ+   V  + A+W   A S+
Sbjct:    1 WYEALAKPAWTPPNWVFPAVWIPLKVLQSVAAWLVWRSAPTTQQLY------LPLALFVAHLFLGSWWNVVFFGRHQMQQSVKWMAAFWCSIAASI 90          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A5J4Y7V0_9CHLO (TspO and MBR related protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y7V0_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 1.880e-16
Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 0
Query:  293 LQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWM 386
            +  NWYR LRKP WTPP++VFP  WIPLK  Q  A+ L+W      K       L  P+ +F  + A+G+ WN V+ GRHQ+   V  +GA+W+
Sbjct:   44 MDPNWYRNLRKPEWTPPNWVFPAMWIPLKIAQSVAVWLVW------KSRADKQELALPLTVFGASLALGNWWNVVFMGRHQMKPSVKWMGAFWL 131          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A8J4G513_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4G513_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 6.700e-16
Identity = 56/182 (30.77%), Postives = 76/182 (41.76%), Query Frame = 0
Query:  296 NWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLN 477
            +WY+ L+KP WTPP++VFPM WIPLK MQ  AL L+  K P          L  P+A F  +  +G+ WN V+FGR QL   +  +  +W                                                  A + AT A+F      A YL+ PT VWV++A  L     +LN
Sbjct:   41 SWYKSLKKPSWTPPNYVFPMVWIPLKIMQSVALWLVCTKAPTA------GALAMPLATFGAHMFLGNWWNVVFFGRRQLKGSLPWMYTFW--------------------------------------------------ASIAATSAAFHPVSHAAAYLMLPTQVWVTIAAKLNYDFVKLN 166          
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Match: A0A2J8AAG3_9CHLO (Protein CrtK n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AAG3_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 6.700e-16
Identity = 55/183 (30.05%), Postives = 79/183 (43.17%), Query Frame = 0
Query:  296 NWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLCATLASFFATDRTAFYLLAPTLVWVSLATALTVRVWQLNK 478
            +WY+ L+KP WTPP++VFP+ WIPLK MQ  AL L+  K P        + L  P+     + A+G+ WN V+FG+ +L   +  +  +W                                                  A + AT A+F+     A YLL PT VWV++A  L V +  LNK
Sbjct:   41 SWYKSLKKPSWTPPNYVFPLVWIPLKLMQTVALWLVATKAPSA------AALGVPLFAMGAHMALGNWWNVVFFGQRKLNESLPWMYTFW--------------------------------------------------ASVAATAAAFYPISPLAAYLLLPTQVWVTIAAKLNVDIVALNK 167          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351688 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIB6_9STRA2.700e-269100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LDV9_ECTSI2.050e-2531.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3VHW3_DUNTE2.380e-2030.65Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A8IE17_CHLRE9.750e-1931.38TspO/MBR-related protein n=3 Tax=Chlamydomonas Tax... [more]
A0A150H3I1_GONPE6.120e-1829.12Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A2P6TZX4_CHLSO2.050e-1731.02Tryptophan-rich sensory n=1 Tax=Chlorella sorokini... [more]
E1ZHH7_CHLVA2.100e-1743.75Uncharacterized protein (Fragment) n=1 Tax=Chlorel... [more]
A0A5J4Y7V0_9CHLO1.880e-1643.62TspO and MBR related protein n=1 Tax=Trebouxia sp.... [more]
A0A8J4G513_9CHLO6.700e-1630.77Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A2J8AAG3_9CHLO6.700e-1630.05Protein CrtK n=1 Tax=Tetrabaena socialis TaxID=477... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038330TspO/MBR-related superfamilyGENE3D1.20.1260.100TspO/MBR proteincoord: 284..396
e-value: 3.1E-14
score: 54.8
coord: 397..479
e-value: 1.1E-12
score: 49.8
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 295..395
e-value: 1.2E-15
score: 57.6
coord: 403..474
e-value: 4.7E-10
score: 39.5
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 416..478
coord: 294..392
IPR004307TspO/MBR-related proteinCDDcd15904TSPO_MBRcoord: 295..474
e-value: 1.4083E-19
score: 82.93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR10057:SF0TRANSLOCATOR PROTEINcoord: 416..478
coord: 294..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_97contigContig_97:416734..426920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351688mRNA_14231Tribonema minus UTEX_B_3156 mRNAContig_97 416385..426920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351688|estExt_Genemark1.C_Ctg_970043 ID=Trimin1|351688|estExt_Genemark1.C_Ctg_970043|Name=jgi.p|Trimin1|351688|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=482bp
MRHEEIPQVRRARPGNPAGRAVKAVPGQARSARAHTEARQSFMASADGGV
GASLTEPKLFFTVAGVDVGAMTQSLEQRSRCLASLVRTAETSLYLAAPMM
AASHLLTVCRRSLRRVGARPAELEGDADEASADAAAALSTDADELSAASA
AAARLSGGGRGGRGPPAARGGAGSGVAVHGRSDARSAVLATVETALEASL
LVAFVWAWSAASARVVAAVSPKMDAASADALATGLGLMAWGAVVFGSGFL
SVLPGRYREKCSAAASLFGSGFLSVLPGRYREKVQALSVDYPLQKNWYRM
LRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSP
VALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAYWMLNALSVWFGRHQLG
LGVTVVGAYWMLNALSVWFGRHQLGLGVAVMGAYWAMLCATLASFFATDR
TAFYLLAPTLVWVSLATALTVRVWQLNKGRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038330TspO/MBR-related_sf
IPR004307TspO_MBR