Trimin1|351658|estExt_Genemark1.C_Ctg_960020 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A836C7W8_9STRA (tRNA pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W8_9STRA) HSP 1 Score: 566 bits (1460), Expect = 2.950e-203 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MREARRRGGSGGAFDATGLGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHYPPMEDILAAAALYAENRAAALQDGQLQGEAADTDDEEGCLSDRETAIRL 310
MREARRRGGSGGAFDATGLGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHYPPMEDILAAAALYAENRAAALQDGQLQGEAADTDDEEGCLSDRETAIRL
Sbjct: 1 MREARRRGGSGGAFDATGLGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHYPPMEDILAAAALYAENRAAALQDGQLQGEAADTDDEEGCLSDRETAIRL 310
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A4R2KKI8_9RHOB (tRNA pseudouridine synthase A n=1 Tax=Rhodovulum euryhalinum TaxID=35805 RepID=A0A4R2KKI8_9RHOB) HSP 1 Score: 112 bits (281), Expect = 7.340e-26 Identity = 82/243 (33.74%), Postives = 111/243 (45.68%), Query Frame = 0
Query: 19 LGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHY 261
L +A+N+ L+ V ++D V D FHAR A R Y++R+V P + E GR WQVP PLDL +RAAAA L G HDFT+FR + C KSP++ I+ ++E +G P Q +R RSFL+ QVR++VG +++VGAG S ++ A L ARDR+ P PPHGLYL V Y
Sbjct: 75 LTQALNYHLKPA--PVAVIDCARVEDDFHARFSAIERRYLFRLVARRAP------------------------------------MTLELGRVWQVPHPLDLAPMRAAAAHLVGRHDFTTFRASICQAKSPVKTIDALEIEE----------------TGFPGGQEFRFRLRARSFLHNQVRSIVGT--------------LERVGAGAWSPGQVRAALDARDRAACGPVCPPHGLYLAAVGY 249
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: R6J3M6_9PROT (tRNA pseudouridine synthase A n=1 Tax=Azospirillum sp. CAG:239 TaxID=1262705 RepID=R6J3M6_9PROT) HSP 1 Score: 112 bits (281), Expect = 3.560e-25 Identity = 80/243 (32.92%), Postives = 110/243 (45.27%), Query Frame = 0
Query: 19 LGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHY 261
L A+N LR V ++ +E V FHAR A GR Y+YRI++ PA + E+ R W VPVPLD+E++R A L G HDF+SFR AAC KSP++ +++ D+E G + + V RSFL+ QVRNMVG ++ VG G + D++ +L A+DR A P AP GLYL +V Y
Sbjct: 166 LREAMNARLRDMEAPVCVISVEKVGQDFHARFSAKGRGYLYRILNRRAPA------------------------------------VLEKNRVWWVPVPLDVEKMREGAKYLLGHHDFSSFRAAACQAKSPIKTLDKLDIEVFG--------------------EEIRFIVEARSFLHHQVRNMVGT--------------LKMVGDGHLQPDDVKRILEAKDRKAAGPTAPACGLYLSKVVY 338
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: R6HT74_9PROT (tRNA pseudouridine synthase A n=3 Tax=Azospirillum TaxID=191 RepID=R6HT74_9PROT) HSP 1 Score: 110 bits (276), Expect = 5.350e-25 Identity = 79/243 (32.51%), Postives = 113/243 (46.50%), Query Frame = 0
Query: 19 LGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHY 261
L A+N LR+ V ++ +E V + FHAR A GR Y+YRI++ PA + E+ R W VPVPLD+E++R A L G HDF+SFR AAC KSP++ ++R D+E RG + + V RSFL+ QVRNMVG ++ VG G + +++ +L A++R+ A AP GLYL +V Y
Sbjct: 100 LREAINARLREMEAPVSVIAVEKVGNDFHARFSARGRGYLYRILNRRAPA------------------------------------VLEKNRVWWVPVPLDVEKMREGAGYLIGHHDFSSFRAAACQAKSPVKTLDRLDIEVRG--------------------EEIHFIVEARSFLHHQVRNMVGT--------------LKMVGDGHLHPEDVKRILEAKNRAAAGVNAPACGLYLTKVVY 272
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: G7Z9Q7_AZOL4 (tRNA pseudouridine synthase A n=23 Tax=Azospirillum TaxID=191 RepID=G7Z9Q7_AZOL4) HSP 1 Score: 109 bits (273), Expect = 8.070e-25 Identity = 82/248 (33.06%), Postives = 108/248 (43.55%), Query Frame = 0
Query: 14 FDATGLGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHY 261
F L A+N L+ + ++++E V FHAR + GR YVYRIV+ P L + GRAW V PLD E + AAA L G HDFTSFR A C KSP++ ++R DVE +G + + RSFL+ QVRNMVG ++ VGAG S+D++ L ARDR+ A P PP GLY + Y
Sbjct: 70 FTGLKLRDALNFHLKPA--PIAVLEVEAVTGDFHARLTSTGRAYVYRIVNRRAP------------------------------------LALDAGRAWHVTRPLDAEAMHAAAQVLVGQHDFTSFRAALCQAKSPVKTLDRLDVERQGDEIR--------------------VHAAARSFLHHQVRNMVGT--------------LELVGAGKWSVDDVRRALEARDRAKAGPTCPPDGLYFKLARY 245
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A2S2CPS6_9PROT (tRNA pseudouridine synthase A n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CPS6_9PROT) HSP 1 Score: 108 bits (271), Expect = 1.570e-24 Identity = 82/240 (34.17%), Postives = 104/240 (43.33%), Query Frame = 0
Query: 22 AVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHY 261
A+NH L+ V ++ E VPD FHAR GR+YV+RIV+ P L + GRAW V PLD E + AA L G HDFTSFR A C KSP++ ++R +VE +G L + RSFL+ QVRNMVG ++ VGAG D++ L ARDR+ A P APP GLY Y
Sbjct: 78 ALNHHLKPA--PVAVLLAEEVPDDFHARLSCLGRSYVFRIVNRRAP------------------------------------LALDAGRAWHVQRPLDAEAMNLAARHLIGQHDFTSFRAALCQAKSPVKTLDRLEVERQG--------------------DELRIHAAARSFLHHQVRNMVGT--------------LELVGAGKWQPDDVRRALEARDRAKAGPTAPPDGLYFVSARY 245
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A366FWA2_9HYPH (tRNA pseudouridine synthase A n=1 Tax=Roseiarcus fermentans TaxID=1473586 RepID=A0A366FWA2_9HYPH) HSP 1 Score: 108 bits (269), Expect = 3.050e-24 Identity = 81/230 (35.22%), Postives = 104/230 (45.22%), Query Frame = 0
Query: 32 HDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHY 261
H V ++ +E V D F ARH A R YVYR+V+ P L +RGRAW+V LD+E +RAAA AL G HDFT+FR A C KSP+R ++R DV G ++T +V SFL+RQVR+MVG+ + VGAG + +L A L A +RS AP HGLYL V Y
Sbjct: 86 HPVAVLAVEPVADDFDARHSARARHYVYRVVNRRAP------------------------------------LALDRGRAWRVKASLDVEAMRAAARALIGRHDFTTFRDAQCQAKSPIRTLDRLDVARDG--------------------DAITFAVSALSFLHRQVRSMVGS--------------LIDVGAGRWTAADLAAALAAAERSRCGQVAPAHGLYLARVDY 245
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A1I6UGC8_9RHOB (tRNA pseudouridine synthase A n=3 Tax=Sulfitobacter TaxID=60136 RepID=A0A1I6UGC8_9RHOB) HSP 1 Score: 107 bits (266), Expect = 1.050e-23 Identity = 76/244 (31.15%), Postives = 106/244 (43.44%), Query Frame = 0
Query: 19 LGRAVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHYP 262
L A+N+ ++ H V +VD V D FHAR A R Y++RI+ PA F+ G W V PLDL+ +R A+ L G HDFT+FR C +P++ ++R D+ PA + VR RSFL+ QVR+ VG +++VGAG + D++ +L ARDR P +PPHGLYL V YP
Sbjct: 75 LSEALNYHMKP--HPVAIVDCVQVDDTFHARFSAQERRYLFRILMRRAPAT------------------------------------FQAGLVWNVKKPLDLDAMREGASHLLGQHDFTTFRSTICQSMTPVKTVDRLDMNL----------------VDTPAGPEVHFDVRARSFLHNQVRSFVGT--------------LERVGAGSLRPDDVKTMLEARDRQACGPVSPPHGLYLSHVGYP 250
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A7W6GFF0_9HYPH (tRNA pseudouridine synthase A n=1 Tax=Hansschlegelia beijingensis TaxID=1133344 RepID=A0A7W6GFF0_9HYPH) HSP 1 Score: 106 bits (265), Expect = 1.400e-23 Identity = 85/241 (35.27%), Postives = 103/241 (42.74%), Query Frame = 0
Query: 22 AVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHYP 262
A N LR H V +++ VP+AF AR A R YVYRIV P L + GRAW+VP LD+ + AAA L G HDFT+FR AAC SPLR ++R DVE G V +S RSFL+ QVR+M G+ + QVG G S D+L L DRS P APP GL L +V YP
Sbjct: 78 AANAHLRP--HPVAVLEASAVPEAFDARFSAIRRHYVYRIVDRRPP------------------------------------LALDLGRAWRVPKRLDVAAMDAAAKRLLGRHDFTTFRSAACQASSPLRTLDRLDVERSGDAVL--------------------ISTNARSFLHNQVRSMAGS--------------LVQVGLGRWSADDLATALARADRSACGPVAPPDGLTLVQVDYP 246
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Match: A0A2S6Q608_9PROT (tRNA pseudouridine synthase A n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q608_9PROT) HSP 1 Score: 106 bits (264), Expect = 1.990e-23 Identity = 82/244 (33.61%), Postives = 109/244 (44.67%), Query Frame = 0
Query: 22 AVNHALRQERHDVHLVDLELVPDAFHARHHAAGRTYVYRIVHPLWPAAAEGAGGPRNGGRSALSQXXXXXXXXXXXXXXXQNLLFERGRAWQVPVPLDLERVRAAAAALSGVHDFTSFRGAACVMKSPLRRIERFDVEARGPPVACGSSGGGXXGSGAPAWQSLTLSVRCRSFLNRQVRNMVGAFSAGAIRVRNMVGAIQQVGAGVMSLDELIALLHARDRSLAPPPAPPHGLYLQEVHYPPME 265
A+N +R E+ + + D V FHAR A RTY+YRI++ PR E GR W VP+PLD + + AAA AL G H+FTSFR A C KSP+R IE V +G + + VR +SFL+ Q+RN G+ ++ VG+ + +L+A L A DRS A P APP GLYL EV YP M+
Sbjct: 78 ALNAHMRNEQ--IVVTDAVQVMPNFHARISAVRRTYLYRILNRR----------PRP--------------------------TLEAGRVWHVPLPLDTKAMHAAAQALVGRHNFTSFRAAMCQAKSPVRTIEELSVIRKGDEIQ--------------------IHVRAQSFLHHQIRNFAGS--------------LELVGSRKWTAADLLAALAAEDRSAAGPTAPPDGLYLVEVEYPNMD 249 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351658 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|351658|estExt_Genemark1.C_Ctg_960020 ID=Trimin1|351658|estExt_Genemark1.C_Ctg_960020|Name=jgi.p|Trimin1|351658|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=311bpback to top |