Trimin1|351652|estExt_Genemark1.C_Ctg_960007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351652
Unique NameTrimin1|351652|estExt_Genemark1.C_Ctg_960007
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length380
Homology
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A836C863_9STRA (Surp module-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C863_9STRA)

HSP 1 Score: 617 bits (1592), Expect = 4.580e-221
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
Query:    1 MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDMKE 352
            MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDMKE
Sbjct:    1 MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDMKE 352          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: D7FWN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN9_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 4.050e-103
Identity = 198/316 (62.66%), Postives = 227/316 (71.84%), Query Frame = 0
Query:   26 SNGGAADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGE---------AKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 332
            SNGG   VE   QGKVKGII PPP+IRAI DKTARFVAKNGKSFE+RI  SEEG+SAKFNFMRPHDPYYAYYE+KIR+ EE  D P  APA   XXXXXXXXXX             A +  K  A A+V +KAVMAPIAKA +++ K  +P  F FS GHPTGLTA D+DLIKLTAQ+TA GGR FLA LA++EA+NE FQFLK  HALFSYF                   TSLVDAYTKVLQPT  Q+A  ++G  RQ  LER VHRWE+DR ++ K++A  A  DAD++AFRSIDW DFVVVETI+FP+DEL
Sbjct:   44 SNGG---VEQPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEENGDAPRAAPATAAXXXXXXXXXXXXXXXXXXXXXXXAGKSDKKAAPASVSRKAVMAPIAKAVKSLNKATEPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYF-------------------TSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVETIEFPDDEL 337          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A4D9CLT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 268 bits (685), Expect = 1.330e-79
Identity = 156/305 (51.15%), Postives = 203/305 (66.56%), Query Frame = 0
Query:   39 GKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGR-DTPAGAPAAPXXXXXXXXXXXADGEA-----KEPGKATAA--AAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGV 335
            GKV GII PPP+IRA+ DKTA++VA+NGKSFEQRIL+SEEG+S+KFNFM+P DPY AYYE++IR  EEG+ + PA   A              DG+A     K P   +AA    V K +V+ PIAKAA     +  PPP  F   HP GL   D+++IKLTAQYTAA GRQFLA LA++E +N +F+FLK  H LFSYF                   T+LVDAY KVLQPT+ Q+A  K G   Q +LERAVHRW +++ ++++++ Q+AE +A+++A++S+DW DFVVVETI F EDEL  V
Sbjct:   31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRRFEEGKGEGPAEKKAKIAEASPPAAGETRDGKAVADTGKTPTAVSAAPTTTVSKASVLGPIAKAALH-KPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYF-------------------TTLVDAYIKVLQPTDAQRAMVKQGLETQKVLERAVHRWVHEKDDEQRKKHQQAEQEAERVAYQSVDWHDFVVVETITFAEDELLDV 315          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: W7TP71_9STRA (SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP71_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.040e-68
Identity = 149/305 (48.85%), Postives = 187/305 (61.31%), Query Frame = 0
Query:   39 GKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGR-DTPAGAPAAPXXXXXXXXXXXADGEA-----KEPGKATAA--AAVQKKAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGV 335
            GKV GII PPP+IRA+ DKTA++VA+NGKSFEQRIL+SEEG+S+KFNFM+P DPY AYYE++IR+ EEG+ + PA   A              DG+A     + P   +AA    V K +V+ PIAKAA     +  PPP  F   HP GL   D+++IKLTAQYTAA GRQFLA LA++E +N +F+FLK  H LFSYF                   T+LVDAY KVLQPT+ Q+A  + G   Q +LERAVHR                     ++A++S+DW DFVVVETI F EDEL  V
Sbjct:   31 GKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVSAAPTTTVSKASVLGPIAKAALH-KPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYF-------------------TTLVDAYIKVLQPTDSQRAMVRQGLETQKVLERAVHRXXXXXXXXXXXXXXXXXXXXXRVAYQSVDWHDFVVVETITFAEDELLDV 315          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A7S3LZB0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZB0_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.360e-67
Identity = 149/302 (49.34%), Postives = 183/302 (60.60%), Query Frame = 0
Query:   36 ASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAA----AVQKKAVMAPIAKAARTIAKDVKPP-PFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 332
            A+QGK+ G+I+PPPEIRA+ DKTA FVAK GKSFEQR+L SEEG++AKFNFMRP DPY+AYYE KIRE E             XXXXXXXXXXX                      K +++ PIA+ A+T   +  P   F  ++ HP GLT  D+D IKL AQYTA  GR+FLA LA +E +N  F FLK  H LFSYF                   T LVD Y K+L P+   K    A  + Q  +E AV RW++ RAE E+RR + +E  A++LAF++IDW DF VVETIDFPE EL
Sbjct:    6 ATQGKITGVIIPPPEIRAVVDKTAAFVAKIGKSFEQRVLASEEGKTAKFNFMRPFDPYHAYYEMKIREGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVKASILNPIAQLAQTKPTEASPELEFSVANSHPAGLTPFDVDAIKLAAQYTAVNGREFLANLALREQRNPQFDFLKPTHMLFSYF-------------------TYLVDCYAKILHPSAALKDTIDAKGNYQTAMESAVRRWQWTRAEAERRRMENSEDSAERLAFQAIDWFDFTVVETIDFPEGEL 288          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A8J2SH94_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH94_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.020e-61
Identity = 140/311 (45.02%), Postives = 177/311 (56.91%), Query Frame = 0
Query:   35 AASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKA-----------TAAAAVQKKA-VMAPIAKAARTIAKDVKPP-PFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL 332
            A S G+V G+I PPP+IRAI DKTA FVA+NGK FE RI  S EG+S KF FMRP+DPY AYYE+KIREVEE                        DGE K   K             AA+ V K+A V AP+ +A + + ++  PP P       P+ +T  D ++IKLTAQYTAA GRQFLA LA++E +N  F FLK  H LFSYF                   T LVDAYT+ L P  + +A  K     +  L+R   RW++ R   EK R ++A  DAD+ +F+++DW DFVVVE IDFP+DEL
Sbjct:   21 APSSGEVTGVIRPPPDIRAIVDKTALFVARNGKQFEARIQASAEGQSQKFAFMRPNDPYNAYYEFKIREVEEN-----------------------DGELKVVEKPKVEAPVTTEVKAAASTVSKRATVAAPVQRALQGLGEETTPPVPLTAQLTTPSSVTPLDAEIIKLTAQYTAASGRQFLAGLAQREQRNPQFDFLKPTHVLFSYF-------------------TQLVDAYTRALAPPPELRAEVKRVEDPEHALKRCARRWDWSRRVDEKERREKALRDADRASFQAVDWHDFVVVEVIDFPKDEL 289          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A7R9U8G3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8G3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 4.030e-57
Identity = 141/317 (44.48%), Postives = 190/317 (59.94%), Query Frame = 0
Query:   31 ADVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQK-KAVMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGV-TYGTMDEEQD 345
            A+ E A+QGKV GII+PPP+IRA+ADKTA+FVAKNGK+FE+RIL S +G   KF+FMR +D YYAYYE+KIRE EEG             XXXXXXXXX                +++ K +++PI  A + + +D  PPP  F       L+  DLD+IKL AQ+TA GGRQFLA L  +E +N  F FL+    LF++F++                   LVDAY+K++   +  K   +       ++ERAV RW+++RA +  R+A+E    A+++AF SIDW DF +VETIDF +DEL      GT  EEQD
Sbjct:   33 AESEKATQGKVVGIIIPPPDIRAVADKTAQFVAKNGKTFEERILRSAQGH--KFDFMRKNDVYYAYYEHKIREFEEGTAEENERKRREAEXXXXXXXXXXXXXXXXXXXXXXXQTLERSKVIVSPIVTALKKVPEDEAPPPLDFILPEMAALSVADLDVIKLCAQFTALGGRQFLAELQSREERNAQFDFLRPTSMLFAFFSA-------------------LVDAYSKLVNQPDGVKKDLRRSLDSTRVIERAVWRWKHERASEAARQAKEEAEVAERMAFTSIDWHDFTIVETIDFGKDELLETPAEGTAQEEQD 328          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: D0N1H1_PHYIT (Splicing factor 3 subunit, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1H1_PHYIT)

HSP 1 Score: 194 bits (494), Expect = 7.910e-53
Identity = 123/296 (41.55%), Postives = 171/296 (57.77%), Query Frame = 0
Query:   34 EAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTI-AKDVKPPPF-VFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDF 327
            +AA QG+V GII PPP+IRA+ DKTA+FVA NG++FE RI+   E  SAKF+F+R  DPY+AYYE+K+ E    ++ P  AP                 E  +  +      V+KKAV    A+ A+ I  ++++PPP  +F   HPT L+A D +++ LTAQYTA  G  FL+ LA +E +N  F FLK  H LF+YF                   T+LV++YT VL   + Q    + G  R  +L+R VHR E+ R EQE+   + AE DA++ A   +DW DFV+VETI+F
Sbjct:    9 DAAVQGRVTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVG--ERVSAKFSFLRESDPYHAYYEHKVSEFTVKKEDPLPAPEPQQPEHTAEGQQETTQEIAKAVETVGDVVVEKKAVQDVTAQVAKNIRGRELEPPPEEIFIIKHPT-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYF-------------------TALVESYTLVLAKQDAQMKRIEDGMERMKVLDRCVHRMEWQRTEQEREDKEAAEGDAERRALAQVDWHDFVIVETINF 282          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A6A4YYN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YYN6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.700e-52
Identity = 140/310 (45.16%), Postives = 188/310 (60.65%), Query Frame = 0
Query:   36 ASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEE--GRDTPAGAPAAPXXXXXXXXXXXADGEA-KEPGKATAAAAVQKKAVMAPIAKAARTIAKDVKPPPFV--FSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKA---------AAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDE 331
            A  G+V GII PPPEIRA+ DKTA+FVA+NG+SFE++I    E  SAKF+F++P+DPY+AYYE+K+ E E       PA +PAA XXXXXXXXXXXA      EP K      V+KK + A ++K+ + I KD   PP    F   HPT LT  D +++ LTAQYTA  G+ FL+ LA +E +N  F FLK  H LF+YF                   T LV++Y K+L    Q+           A +AG  R  +L+R VH+ E+ R E+E ++ +  E DA+KLA++ IDW DFVVVETI F +++
Sbjct:   10 AVHGRVTGIIYPPPEIRAVVDKTAQFVARNGRSFERKIAG--EVISAKFSFLKPNDPYHAYYEHKVEEFETQLNEPEPAKSPAAXXXXXXXXXXXXAPAALPSEPAKIEVGV-VEKKPIEAVVSKSLQKI-KDKNQPPAEEQFKQKHPT-LTPLDQEIMYLTAQYTAVSGKPFLSGLATREQRNPQFDFLKPTHPLFAYF-------------------TFLVESYAKILTAKAQENKKMSGNVLIEALEAGMDRMQVLDRCVHKHEWMRREEEDKQKEAMETDAEKLAYQQIDWHDFVVVETITFDDND 295          
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Match: A0A1V9Z6W9_9STRA (Splicing factor 3 subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6W9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.150e-51
Identity = 140/324 (43.21%), Postives = 195/324 (60.19%), Query Frame = 0
Query:   32 DVEAASQGKVKGIIVPPPEIRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYKIREVEEGRDTPAGAPAAPXXXXXXXXXXXADGEAKEPGKATAAAAVQKKAVMAPIAKAARTIAKDVK---PPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGGRQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCXXXXXXXXXXXXTSLVDAYTKVLQPTEQQKAAAKA-------GCSRQVMLERAVHRWEYDRAEQEKRRAQEAEMDADKLAFRSIDWQDFVVVETIDFPEDEL-TGVTYGTMDEEQ 344
            +V  A  G+V GII PPP+IRA+ DKTA+FVAKNG++FE++I    E  SAKF+F++  DPY+AYYE+K+ E E+G + P   PA  XXXXXXXXXXX + + +        A V+KKA+ A + K+ R +++  K   PP   F   HPT LTA D +++ LTAQYTA GG+ FL+ LA +E +N  F F+  +H LF+YF                   T LV++Y K+L    Q    +         G  R  +L+R VH+ EY R E E ++ +EAE DA++LA+  IDW DFVVVETI F + +L T +    ++EEQ
Sbjct:    7 NVPIAGHGRVTGIIYPPPDIRAVVDKTAQFVAKNGRAFERKIAG--EVISAKFSFLKDSDPYHAYYEHKVDEFEKGLNEPE-KPAEXXXXXXXXXXXXXNVQVE--------AVVEKKAIEAAVGKSFRNLSESDKKKPPPEEQFKQKHPT-LTAQDQEIMYLTAQYTAVGGKAFLSGLATREQRNPQFDFINPVHPLFAYF-------------------TFLVESYAKILTAKAQYGKKSNPLIERLEDGFERMRVLDRCVHKLEYMRLEAEAKQKEEAENDAERLAYMQIDWHDFVVVETITFDDSDLATDIAPYYIEEEQ 299          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351652 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C863_9STRA4.580e-221100.00Surp module-domain-containing protein n=1 Tax=Trib... [more]
D7FWN9_ECTSI4.050e-10362.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CLT9_9STRA1.330e-7951.15Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TP71_9STRA1.040e-6848.85SWAP/Surp n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A7S3LZB0_9STRA3.360e-6749.34Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A8J2SH94_9STRA1.020e-6145.02Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7R9U8G3_9STRA4.030e-5744.48Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D0N1H1_PHYIT7.910e-5341.55Splicing factor 3 subunit, putative n=2 Tax=Phytop... [more]
A0A6A4YYN6_9STRA2.700e-5245.16Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A1V9Z6W9_9STRA1.150e-5143.21Splicing factor 3 subunit n=1 Tax=Thraustotheca cl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availablePANTHERPTHR15316:SF1SPLICING FACTOR 3A SUBUNIT 1coord: 238..333
NoneNo IPR availablePANTHERPTHR15316:SF1SPLICING FACTOR 3A SUBUNIT 1coord: 36..231
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 186..235
e-value: 5.1E-8
score: 42.6
coord: 52..106
e-value: 7.0E-18
score: 75.4
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 186..230
e-value: 8.4E-11
score: 41.7
coord: 52..103
e-value: 6.7E-16
score: 58.0
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 54..97
score: 16.650284
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 188..230
score: 13.327327
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 38..110
e-value: 2.4E-20
score: 73.9
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790Surp modulecoord: 181..233
e-value: 5.7E-13
score: 50.6
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 41..106
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 167..231
IPR022030Splicing factor 3A subunit 1, conserved domainPFAMPF12230PRP21_like_Pcoord: 276..333
e-value: 5.5E-14
score: 52.6
IPR045146Splicing factor 3A subunit 1PANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 238..333
IPR045146Splicing factor 3A subunit 1PANTHERPTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDcoord: 36..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_96contigContig_96:58157..63031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351652mRNA_13037Tribonema minus UTEX_B_3156 mRNAContig_96 58157..63031 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351652|estExt_Genemark1.C_Ctg_960007 ID=Trimin1|351652|estExt_Genemark1.C_Ctg_960007|Name=jgi.p|Trimin1|351652|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=380bp
MSAAVASSLPVPGPGAAAPEQDGSSSNGGAADVEAASQGKVKGIIVPPPE
IRAIADKTARFVAKNGKSFEQRILNSEEGRSAKFNFMRPHDPYYAYYEYK
IREVEEGRDTPAGAPAAPAPAAAAPAAAAADGEAKEPGKATAAAAVQKKA
VMAPIAKAARTIAKDVKPPPFVFSHGHPTGLTAHDLDLIKLTAQYTAAGG
RQFLATLARKEAQNEMFQFLKGMHALFSYFASPEACCFLKGTHALFSYFT
SLVDAYTKVLQPTEQQKAAAKAGCSRQVMLERAVHRWEYDRAEQEKRRAQ
EAEMDADKLAFRSIDWQDFVVVETIDFPEDELTGVTYGTMDEEQDVEMDM
KEQDFVVVETIDFPEDELTGVTYGTMDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000061Surp
IPR035967SWAP/Surp_sf
IPR022030SF3A1_dom
IPR045146SF3A1