Trimin1|351624|estExt_Genemark1.C_Ctg_950001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351624
Unique NameTrimin1|351624|estExt_Genemark1.C_Ctg_950001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length247
Homology
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: A0A836C7Y1_9STRA (Uricase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y1_9STRA)

HSP 1 Score: 492 bits (1267), Expect = 5.530e-176
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query:    1 MVHALFLDTYPQRLTNRTLYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGAPMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            MVHALFLDTYPQRLTNRTLYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGAPMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL
Sbjct:    1 MVHALFLDTYPQRLTNRTLYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGAPMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: D8LM50_ECTSI (Uricase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM50_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 4.060e-74
Identity = 121/230 (52.61%), Postives = 149/230 (64.78%), Query Frame = 0
Query:   21 RHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGA----PMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            +H       LV  CRV+VK+D W+RV+  DS G   +H+HAF K GPHY + R E  R       +R +GG KG TL KTTQSSF +FHKD  TSLP+A DRL+G+  D EW Y        V    +F   R +I+D + + FAGPAD GV S SVQVT +QMG AVL+  P V++ T YMPNVHN+PFDLAK G+ N D TG   I YP+DEPHGIIQAT+ RP +KL
Sbjct:   85 KHFLATYPDLVHRCRVMVKEDTWKRVRTADSTGKTRDHDHAFLKAGPHYLFGRSEGTRQPCGRISIRAFGGVKGLTLFKTTQSSFTNFHKDNNTSLPEAEDRLLGTCMDGEWEYD-------VLRSPDFSGDRAKIIDVLVEQFAGPADKGVYSPSVQVTCFQMGSAVLATVPSVSECTFYMPNVHNLPFDLAKYGLVNADQTGLPHIFYPVDEPHGIIQATMKRPSSKL 307          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: W7TW56_9STRA (Uricase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW56_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.660e-57
Identity = 100/230 (43.48%), Postives = 142/230 (61.74%), Query Frame = 0
Query:   21 RHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPR---GAPMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRP-GAKL 246
            +H       +VT   V + +D+W RV   DS G + +HNHAF KVGP  T+  + A +      + +  G +   LLKTTQS F +FH+D + +L    DRL+G++ D EW+++    AA ++ R ++ A+   +LDT+   FAGPAD GV S SVQ TLY MG  +L+  P V  I LYMPN+HN+P DL+K  + N DH+G  DI  P+D+PHG+I+A I RP GA+L
Sbjct:   85 KHFLAQYPAIVTKVDVQLVKDLWTRVVNKDSHGRIAQHNHAFIKVGPQTTHTHIVAEKVGGSVVVSVRSGIRSLILLKTTQSGFENFHRDEFRALGDTNDRLVGTSVDGEWSFS----AATIASRPDYEALNKTVLDTLIDEFAGPADKGVYSVSVQQTLYDMGTGLLAKVPGVDKIELYMPNIHNIPVDLSKFRIENKDHSGKPDIFLPMDDPHGMIKAIIERPRGARL 310          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: H3GV00_PHYRM (Uricase n=21 Tax=Phytophthora TaxID=4783 RepID=H3GV00_PHYRM)

HSP 1 Score: 189 bits (481), Expect = 9.690e-56
Identity = 104/232 (44.83%), Postives = 143/232 (61.64%), Query Frame = 0
Query:   19 LYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPR---GAP-MRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            L +H       +++  +V + +  WERV VPDS+G    H+HAF   G  ++ A V A +   GAP + + GG  G  +LKTTQS+FVDF +D YT+LP   DRL+ +   S W+YTP     A+ G  +FVA   ++ + + +TF+GPADVGVPS +VQ TLY+MG AVL   P V DI + MPN+HN P DLA+ G  N    G  ++  P DEPHGII AT+VR  ++L
Sbjct:   84 LAKHFVTKHPDIISVAKVKLFETPWERVVVPDSKGQTRPHHHAFVSAGAGFSTAYVVARKSSHGAPEVTVQGGVDGLKVLKTTQSAFVDFFRDEYTTLPDVPDRLVSTCVTSTWSYTP----GAIGG--DFVARAAEVKNVLLETFSGPADVGVPSPAVQFTLYKMGEAVLERCPYVQDIKITMPNIHNNPIDLARFGCKNIHPHG--EVFLPTDEPHGIISATMVRSASRL 307          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: A0A0N7L5S7_PLAHL (Uricase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5S7_PLAHL)

HSP 1 Score: 179 bits (455), Expect = 7.680e-52
Identity = 102/232 (43.97%), Postives = 138/232 (59.48%), Query Frame = 0
Query:   19 LYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPR---GAP-MRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            L  H       +V+  +V + +  WER+ +PDS+GV+  H+HAF    P ++ A V A +   G P + + GG  G   LKTTQS+FV+F +D +T+L  A DRL+ +   S WTY  +T       R +F      I + + +TFAGPADVGVPS +VQ TLY+MG AVL     V +IT+ MPN+HN P DL++ G  N    G  ++  PIDEPHGII ATIVR  AKL
Sbjct:   84 LAEHFVMKHPEIVSLAKVKLFEMPWERLVLPDSKGVMRPHHHAFVSASPGFSTATVTARKSKYGDPEVTVQGGVDGLKALKTTQSAFVNFLRDEFTTLEDAPDRLVSTCISSTWTYISETT------RGDFATKAAVIKNVLLETFAGPADVGVPSPAVQFTLYKMGEAVLEKCSYVKEITISMPNIHNNPIDLSRFGCKNIHPHG--EVFLPIDEPHGIISATIVRSTAKL 307          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: K3W9W7_GLOUD (Uricase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9W7_GLOUD)

HSP 1 Score: 177 bits (448), Expect = 8.580e-51
Identity = 100/233 (42.92%), Postives = 133/233 (57.08%), Query Frame = 0
Query:   19 LYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAF----KKVGPHYTYARVEAPRGAPM-RLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            L +H       ++   +V + +  WERV   DS G V  H HAF      +   Y  AR     G PM  L  G  G+ ++KTTQSSF+DF +D YT+LP   DRL+G+   + W +T +   +       F A R+Q+   +  TFAGPADVGVPS +VQ TLYQMG AVL+  P V DIT+ MPNVHN+P DL + G+ N    G  ++  P  EPHGIIQA +VR  ++L
Sbjct:   83 LAKHFVSKHPQIIDVAKVKLFETHWERVVNADSTGKVRPHAHAFVGVDSGISTTYAVARKAPHGGEPMISLSSGIDGWRVMKTTQSSFMDFFRDEYTTLPDTPDRLVGTVVKATWNFTSEAFRSC------FKAQREQVKRVLLDTFAGPADVGVPSDAVQATLYQMGEAVLNECPFVKDITILMPNVHNLPVDLTRFGLKNIHPHG--EVFLPTSEPHGIIQAKMVRSTSRL 307          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: A0A662WET4_9STRA (Uricase n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662WET4_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.150e-50
Identity = 99/221 (44.80%), Postives = 133/221 (60.18%), Query Frame = 0
Query:   31 VTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPR----GAP-MRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            ++  +V + +  WER+  PDS G +  H+HAF      ++ A V A +    GAP + + GG  G  +LKTTQS+FV F KD YT+LP+  DRL+ +   S W YTP     AV G  +F A   ++   + +TFAGP+DVGVPS +VQ TLY+MG AVL   P V DI + MPN+HN P DL + G  N    G  ++  P DEPHGII AT+VR  +KL
Sbjct:  106 ISVAKVKLFETPWERMVTPDSNGKMRPHHHAFVSASAGFSTAYVVARKSPSGGAPQVTVQGGVDGLRVLKTTQSAFVKFFKDEYTTLPEVPDRLVSTVVASTWNYTP----GAVGG--DFTAKAAEVKRVLLETFAGPSDVGVPSPAVQFTLYKMGEAVLEQCPYVKDIKITMPNIHNNPIDLTRFGCKNIHPHG--EVFLPTDEPHGIISATMVRSASKL 318          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: A0A5D6XUS0_9STRA (Uricase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUS0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.710e-50
Identity = 101/233 (43.35%), Postives = 137/233 (58.80%), Query Frame = 0
Query:   19 LYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKV--GPHYTYARV-EAPRGAP--MRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            L +H       +V   +V + +  WERV   DS G V  H+HAF  V  G   T A   +AP G    + L  G  G+ ++KTTQSSFVDF +D YT+LP   DRL+G+   + WT  P+ + +       F   R Q+  T+   FAGPADVGVPS +VQ TL+QMG AVL+  P VTD+++ MPNVHN+P D+ + G+ N    G  ++  P  EPHGIIQAT+VR  ++L
Sbjct:   83 LAKHFVATHPQIVDVAKVKLFETHWERVVTADSTGKVRPHHHAFVGVDSGIATTSAVARKAPHGGEPVVSLSAGIDGWRVMKTTQSSFVDFFRDEYTTLPDVPDRLVGTVVKASWTVAPEALRSC------FKTQRAQVKKTLLDAFAGPADVGVPSDAVQATLFQMGEAVLNKCPFVTDVSILMPNVHNLPVDVTRFGLKNLHPHG--EVFLPTSEPHGIIQATMVRATSRL 307          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: A0A8K1FI17_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI17_PYTOL)

HSP 1 Score: 172 bits (435), Expect = 7.360e-49
Identity = 97/232 (41.81%), Postives = 130/232 (56.03%), Query Frame = 0
Query:   19 LYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPH----YTYARVEAPRGAPMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL 246
            L +H        +   +V + +  W R+  PDS+G    H+HAF   G      Y  AR  A     + +  G +G  +LKT++SSFVDF +D YT+LP   DRL+G+   + W YT +        RV F    D+I   +  TFAGP+D GV S +VQ TLY+MG AVL   P V DIT+ MPNVHN+P DL K G+ N    G  ++  P DEPHGII+AT+VR  +KL
Sbjct:   83 LAKHFVNTHPTKIDVAKVKIFETKWVRLVTPDSKGTRKPHHHAFVGDGSGTATTYVIARKTAHGEPQISVQSGIEGLRVLKTSKSSFVDFFRDAYTTLPDVPDRLVGTVVTATWNYTSEAT------RVCFQKQADEIKRVLLDTFAGPSDAGVDSPAVQFTLYKMGEAVLDQCPSVKDITITMPNVHNLPVDLTKFGLKNIHPHG--EVFLPTDEPHGIIRATMVRATSKL 306          
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Match: M4BL02_HYAAE (Uricase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BL02_HYAAE)

HSP 1 Score: 167 bits (423), Expect = 5.210e-47
Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 0
Query:   19 LYRHXXXXXXXLVTFCRVIVKQDIWERVQVPDSRGVVTEHNHAFKKVGPHYTYARVEAPRGA-----PMRLWGGCKGYTLLKTTQSSFVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRDQILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPNVHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGA 244
            L  H       +++  +V + +  WER+ VP+++G +  H+HAF      ++   V A +        + + GG  G  +LKTTQSSFVDF +D YT+LPQ  DRLM +   + WTY  D V        +F +   +I   + +TFAGP+DVGVPS +VQ TL++MG AVL   P V DI + MPN+HN P DL++ G  N    G  ++  P DEPHGII AT++   A
Sbjct:   84 LATHFVTRHSDIISVAKVKLVETPWERLVVPNTKGEMQPHHHAFVSSSLGFSTTHVVARKSMMDSTPELTVQGGVDGLKVLKTTQSSFVDFFRDEYTTLPQVPDRLMCTCVTASWTYMSDAVGG------DFASKGAEIKKVLLETFAGPSDVGVPSPAVQFTLFKMGEAVLEKCPYVKDIKISMPNIHNNPIDLSRFGCKNIHPHG--EVFLPTDEPHGIISATMIGEQA 306          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351624 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7Y1_9STRA5.530e-176100.00Uricase n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
D8LM50_ECTSI4.060e-7452.61Uricase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM50... [more]
W7TW56_9STRA1.660e-5743.48Uricase n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
H3GV00_PHYRM9.690e-5644.83Uricase n=21 Tax=Phytophthora TaxID=4783 RepID=H3G... [more]
A0A0N7L5S7_PLAHL7.680e-5243.97Uricase n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
K3W9W7_GLOUD8.580e-5142.92Uricase n=1 Tax=Globisporangium ultimum (strain AT... [more]
A0A662WET4_9STRA1.150e-5044.80Uricase n=4 Tax=Peronosporaceae TaxID=4777 RepID=A... [more]
A0A5D6XUS0_9STRA1.710e-5043.35Uricase n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
A0A8K1FI17_PYTOL7.360e-4941.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BL02_HYAAE5.210e-4739.83Uricase n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002042UricasePRINTSPR00093URICASEcoord: 91..107
score: 56.58
coord: 107..119
score: 45.05
coord: 22..35
score: 25.17
IPR002042UricasePFAMPF01014Uricasecoord: 87..236
e-value: 2.8E-16
score: 60.0
IPR002042UricasePIRSFPIRSF000241Urate_oxidasecoord: 15..246
e-value: 3.4E-53
score: 178.7
IPR002042UricasePANTHERPTHR42874URICASEcoord: 18..246
NoneNo IPR availableGENE3D3.10.270.10Urate Oxidase;coord: 16..246
e-value: 4.6E-54
score: 185.6
NoneNo IPR availableSUPERFAMILY55620Tetrahydrobiopterin biosynthesis enzymes-likecoord: 82..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_95contigContig_95:70..4614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351624mRNA_14629Tribonema minus UTEX_B_3156 mRNAContig_95 70..4850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351624|estExt_Genemark1.C_Ctg_950001 ID=Trimin1|351624|estExt_Genemark1.C_Ctg_950001|Name=jgi.p|Trimin1|351624|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MVHALFLDTYPQRLTNRTLYRHFLDTYPQLVTFCRVIVKQDIWERVQVPD
SRGVVTEHNHAFKKVGPHYTYARVEAPRGAPMRLWGGCKGYTLLKTTQSS
FVDFHKDPYTSLPQATDRLMGSNFDSEWTYTPDTVAAAVSGRVNFVAIRD
QILDTMTKTFAGPADVGVPSASVQVTLYQMGGAVLSIAPQVTDITLYMPN
VHNMPFDLAKLGMSNTDHTGNIDILYPIDEPHGIIQATIVRPGAKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002042Uricase