Trimin1|351617|estExt_Genemark1.C_Ctg_940097 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351617
Unique NameTrimin1|351617|estExt_Genemark1.C_Ctg_940097
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length202
Homology
BLAST of jgi.p|Trimin1|351617 vs. uniprot
Match: A0A835YIQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIQ1_9STRA)

HSP 1 Score: 384 bits (985), Expect = 1.730e-134
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
Query:    1 MRGWLDVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPMKWFFRGLDNVAGTNTLTRLQQMMYAVAADEGAAAGAIDAXXXXXXXXVAAPHLGAQP 201
            MRGWLDVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPMKWFFRGLDNVAGTNTLTRLQQMMYAVAADEGAAAGAIDAXXXXXXXXVAAPHLGAQP
Sbjct:    1 MRGWLDVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPMKWFFRGLDNVAGTNTLTRLQQMMYAVAADEGAAAGAIDAXXXXXXXXVAAPHLGAQP 201          
BLAST of jgi.p|Trimin1|351617 vs. uniprot
Match: A0A7S2UZM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM4_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.160e-27
Identity = 58/149 (38.93%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    6 DVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIA-HNEMELPMKWFFRGLDN 153
            +V+R + VG LTM IDG+ TP +Y  LE  S  + +PVV+ KT   + I+GP ANGVFLAGVP+L++G  ++ + F++ +W+ QLL+ATIRDLQ+    +  N  L+P  ++PL    + +G    L      ++   P +WF    ++
Sbjct:  184 NVKRTMHVGFLTMLIDGLATPHYYNALELISEKRTMPVVLLKTFIGTAIFGPVANGVFLAGVPLLQHGLDIV-KMFNFASWKHQLLVATIRDLQIWPLLDMLNFKLLPKHWRPLASSLAALGVITFLGFATGFSQTTTPFQWFMELFES 331          
BLAST of jgi.p|Trimin1|351617 vs. uniprot
Match: A0A6H5JL38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.380e-24
Identity = 56/136 (41.18%), Postives = 75/136 (55.15%), Query Frame = 0
Query:    9 RMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPM 144
            R V  G+L M IDG+ TP WY +++  +    L +  AK VASS+ Y PFANG+FLAG  VLRYG       F W  WRRQL + TIRD ++  P    N  LVP  ++PL    + +    V+S     +  LP+
Sbjct:  266 RTVHAGILNMIIDGIFTPHWYNLVDYVNDEMTLGLAFAKAVASSVFYSPFANGLFLAGARVLRYG---FKTRFGWAVWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPL 398          
BLAST of jgi.p|Trimin1|351617 vs. uniprot
Match: D8LNF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF3_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.300e-15
Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 0
Query:   41 LPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPM 144
            L +   K VASS+ Y PFANG+FLAG  VLRYG       F W  WRRQL + TIRD ++  P    N  LVP  ++PL    + +    V+S     +  LP+
Sbjct:    3 LGLAFVKAVASSVFYSPFANGLFLAGARVLRYG---FKTRFGWAEWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPL 103          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351617 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YIQ1_9STRA1.730e-134100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UZM4_9STRA7.160e-2738.93Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5JL38_9PHAE1.380e-2441.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF3_ECTSI1.300e-1541.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:555770..559692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351617mRNA_8009Tribonema minus UTEX_B_3156 mRNAContig_94 555765..559859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351617|estExt_Genemark1.C_Ctg_940097 ID=Trimin1|351617|estExt_Genemark1.C_Ctg_940097|Name=jgi.p|Trimin1|351617|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=202bp
MRGWLDVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVA
SSLIYGPFANGVFLAGVPVLRYGRAVLGRGFDWVAWRRQLLIATIRDLQL
VTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELPMKWFFRG
LDNVAGTNTLTRLQQMMYAVAADEGAAAGAIDAVAAAAAAAVAAPHLGAQ
P*
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