Trimin1|351597|estExt_Genemark1.C_Ctg_940056 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351597
Unique NameTrimin1|351597|estExt_Genemark1.C_Ctg_940056
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length367
Homology
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BLAST of jgi.p|Trimin1|351597 vs. uniprot
Match: A0A836C7S5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S5_9STRA)

HSP 1 Score: 697 bits (1799), Expect = 4.890e-253
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0 
Query:    1 MRPQLHQLQACFARVQVPRQLYHGGAVRMRSAGRATVPRNGLCTSDTAAAEAATTWASSELGVRLTVLSDDRGLFILQPVTGEPPLPRDVAIALHARFAPLKWLAQVRSAELADCTVSLAAARVLHAEHGRGCRGTVSSKAALAFNARAGSVCSEGASCPAAAQLADCTVSLAAAQALHAEHGRGCSGTVTSKAMAAVPRPRGLKNTKRSSAAARERSRIMGLARRGVARTESPAAHTAAPWAALLNSALRCTSCGKPPWECGSRKSDRPVPLRLIETPSGLKVRLTRCRDQGVESKRCTGHYDIVMEHVTEESLRELPQNVRELLMSGDACCETPSAESARRLRLKKARSRAGHGADGYGSGGGG 366
            MRPQLHQLQACFARVQVPRQLYHGGAVRMRSAGRATVPRNGLCTSDTAAAEAATTWASSELGVRLTVLSDDRGLFILQPVTGEPPLPRDVAIALHARFAPLKWLAQVRSAELADCTVSLAAARVLHAEHGRGCRGTVSSKAALAFNARAGSVCSEGASCPAAAQLADCTVSLAAAQALHAEHGRGCSGTVTSKAMAAVPRPRGLKNTKRSSAAARERSRIMGLARRGVARTESPAAHTAAPWAALLNSALRCTSCGKPPWECGSRKSDRPVPLRLIETPSGLKVRLTRCRDQGVESKRCTGHYDIVMEHVTEESLRELPQNVRELLMSGDACCETPSAESARRLRLKKARSRAGHGADGYGSGGGG
Sbjct:    1 MRPQLHQLQACFARVQVPRQLYHGGAVRMRSAGRATVPRNGLCTSDTAAAEAATTWASSELGVRLTVLSDDRGLFILQPVTGEPPLPRDVAIALHARFAPLKWLAQVRSAELADCTVSLAAARVLHAEHGRGCRGTVSSKAALAFNARAGSVCSEGASCPAAAQLADCTVSLAAAQALHAEHGRGCSGTVTSKAMAAVPRPRGLKNTKRSSAAARERSRIMGLARRGVARTESPAAHTAAPWAALLNSALRCTSCGKPPWECGSRKSDRPVPLRLIETPSGLKVRLTRCRDQGVESKRCTGHYDIVMEHVTEESLRELPQNVRELLMSGDACCETPSAESARRLRLKKARSRAGHGADGYGSGGGG 366
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BLAST of jgi.p|Trimin1|351597 vs. uniprot
Match: A0A835YIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU2_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.780e-103
Identity = 172/222 (77.48%), Postives = 185/222 (83.33%), Query Frame = 0 
Query:  147 ARAGSVCSEGASCPAAAQLADCTVSLAAAQALHAEHGRGCSGTVTSKAMAAVPRPRGLKNTKRSSAAARERSRI--MGLARRGVARTESPAAHTAAPWAALLNSALRCTSCGKPPWECGSRKSDRPVPLRLIETPSGLKVRLTRCRDQGVESKRCTGHYDIVMEHVTEESLRELPQNVRELLMSGDACCETPSAESARRLRLKKARSRAGHGADGYGSGGGG 366
            AR G VCSEGASCP AA+LADC VSLAAA+ALH  HGRGC G VTSKA+AAVPRPRGLKNTKRSSAAARER+RI  +GL RRG    ESPAA TAAPWA LL+SALRCTSCGKPP ECG+RKS +PVP+RLIETP+GLKVRL  CRD  VESKRC GHYDI MEHVTEESLR+LPQNVRE+LM GDAC ETP+A S R  RLKKA SRAG  A  YGS GGG
Sbjct:    2 ARDGCVCSEGASCPVAAELADCRVSLAAARALHTAHGRGCRGAVTSKALAAVPRPRGLKNTKRSSAAARERTRIRFVGLGRRGA--IESPAAGTAAPWAGLLSSALRCTSCGKPPQECGNRKSHKPVPVRLIETPTGLKVRLPCCRDHNVESKRCNGHYDIAMEHVTEESLRQLPQNVREILMGGDACRETPAAGSVRCNRLKKAGSRAGQDAGSYGSSGGG 221
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351597 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C7S5_9STRA4.890e-253100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIU2_9STRA1.780e-10377.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:301908..305184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351597mRNA_7969Tribonema minus UTEX_B_3156 mRNAContig_94 301908..305369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351597|estExt_Genemark1.C_Ctg_940056 ID=Trimin1|351597|estExt_Genemark1.C_Ctg_940056|Name=jgi.p|Trimin1|351597|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=367bp
MRPQLHQLQACFARVQVPRQLYHGGAVRMRSAGRATVPRNGLCTSDTAAA
EAATTWASSELGVRLTVLSDDRGLFILQPVTGEPPLPRDVAIALHARFAP
LKWLAQVRSAELADCTVSLAAARVLHAEHGRGCRGTVSSKAALAFNARAG
SVCSEGASCPAAAQLADCTVSLAAAQALHAEHGRGCSGTVTSKAMAAVPR
PRGLKNTKRSSAAARERSRIMGLARRGVARTESPAAHTAAPWAALLNSAL
RCTSCGKPPWECGSRKSDRPVPLRLIETPSGLKVRLTRCRDQGVESKRCT
GHYDIVMEHVTEESLRELPQNVRELLMSGDACCETPSAESARRLRLKKAR
SRAGHGADGYGSGGGG*
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