Trimin1|351583|estExt_Genemark1.C_Ctg_940032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351583
Unique NameTrimin1|351583|estExt_Genemark1.C_Ctg_940032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length235
Homology
BLAST of jgi.p|Trimin1|351583 vs. uniprot
Match: A0A835YKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC7_9STRA)

HSP 1 Score: 499 bits (1285), Expect = 3.930e-179
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query:    1 MEYGGSWRHWQSLQPAKFWHAIGARGDISIAEWSMENLCLSAEQPTDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLRAAGVGCLDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLKDAGTWRG 234
            MEYGGSWRHWQSLQPAKFWHAIGARGDISIAEWSMENLCLSAEQPTDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLRAAGVGCLDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLKDAGTWRG
Sbjct:    1 MEYGGSWRHWQSLQPAKFWHAIGARGDISIAEWSMENLCLSAEQPTDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLRAAGVGCLDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLKDAGTWRG 234          
BLAST of jgi.p|Trimin1|351583 vs. uniprot
Match: A0A835YIL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIL7_9STRA)

HSP 1 Score: 281 bits (719), Expect = 6.560e-86
Identity = 137/209 (65.55%), Postives = 157/209 (75.12%), Query Frame = 0
Query:   19 WHAIGARGDISIAEWSMENLCLSAEQPTDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLRAAGVGCLDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLK 227
            W AIGA+GDISIAEW+  NL     QP++S+S    T+       D  + LD  P E  P F+KGAA AGKLA+LDWACT G+L   P C RAVA+GA +GGSLDA+KWLH QLGSSD A RQ T+NR G+CELDLRAA  G LD+L WLKEHGLLM+ Q RE S+ACS AAAGC+DPNVIAWLRAEGYGWGSDICY AA  GH+EVLK
Sbjct:  573 WRAIGAQGDISIAEWAFSNLSRPTSQPSESDSESSITD-------DYGDHLDMRPREAMPHFLKGAAGAGKLAVLDWACTHGVLHLIPRCVRAVAEGATTGGSLDAIKWLHAQLGSSDAALRQVTVNRRGLCELDLRAAQAGRLDVLMWLKEHGLLMEAQRREASKACSKAAAGCDDPNVIAWLRAEGYGWGSDICYAAAKPGHVEVLK 774          
BLAST of jgi.p|Trimin1|351583 vs. uniprot
Match: A0A835YRI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI5_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.310e-18
Identity = 71/250 (28.40%), Postives = 99/250 (39.60%), Query Frame = 0
Query:   10 WQSLQPAKF----WHAIGARGDISIAEWSMENLCLSAEQPTDSESAGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQGILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRS-----------------GVCELDLRAAGVGC-----------LDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIAWLRAEGYGWGSDICYNAAMQGHLEVLK 227
            W  L+ +K+    W AIG  G + + EW+++  C              P    P +  D+                 GAAR  +L +L WA  +G L    H    +   A S   L    W  +    + DA   A + +S                 G  E   +    GC           L +L+WL EH  L     R   +AC  AA   ++P+VIAWLR  G+GWGSD+C  AA +GHL VLK
Sbjct:   91 WPPLEVSKWGYVLWPAIGEEGHVPVVEWAIQTYC--------------PNGVAPSHVLDN--------------ITDGAARGRRLPLLQWAFDRGALSQY-HMTNIMLAHATSVRGLPVFLWAWEHKFCNGDARLLARLAQSAARNGCVGVLAHMYARLGGDEFRRKLCHPGCWLHEPAVEGCQLQVLEWLVEHDALPPRNARPRIDACEEAALAADNPDVIAWLREAGFGWGSDVCTRAAERGHLNVLK 311          
BLAST of jgi.p|Trimin1|351583 vs. uniprot
Match: A0A836CMQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ8_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 9.910e-5
Identity = 48/153 (31.37%), Postives = 67/153 (43.79%), Query Frame = 0
Query:   84 AARAGKLAMLDWACTQGILRWTPHCARA------VADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVCELDLR-----AAGVGCLDILKWLKEHGLLMDPQHREESEACSNAAAGCNDP-NVIAWLRAEGY-GWGSDICYNAAMQGHL 223
            A   G++A+L WA T+GILRW P           V + AV+ G L+ + W+         A  +A + R+   +L +      AA  G L +L+WL+ HG L           C  AAA CN    V+ W  A G       IC  AA   H+
Sbjct:    6 AGAGGRVALLKWAHTRGILRWAPTRDGGNEGIDWVVEEAVASGRLEVLAWMLAAGILQRPAELEAALMRTRGTQLTVFNPACVAAAHGRLRLLQWLRAHGFLWT------RGIC--AAAACNKRIGVLEWALANGCEDQEKSICRVAAEGAHM 150          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351583 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YKC7_9STRA3.930e-179100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIL7_9STRA6.560e-8665.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRI5_9STRA1.310e-1828.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMQ8_9STRA9.910e-531.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 18..229
e-value: 2.2E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..77
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 24..227
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 24..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:159060..160611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351583mRNA_7945Tribonema minus UTEX_B_3156 mRNAContig_94 159060..160611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351583|estExt_Genemark1.C_Ctg_940032 ID=Trimin1|351583|estExt_Genemark1.C_Ctg_940032|Name=jgi.p|Trimin1|351583|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=235bp
MEYGGSWRHWQSLQPAKFWHAIGARGDISIAEWSMENLCLSAEQPTDSES
AGQPTEFEPEYSYDSDEELDWTPHETTPPFMKGAARAGKLAMLDWACTQG
ILRWTPHCARAVADGAVSGGSLDAVKWLHKQLGSSDDAFRQATINRSGVC
ELDLRAAGVGCLDILKWLKEHGLLMDPQHREESEACSNAAAGCNDPNVIA
WLRAEGYGWGSDICYNAAMQGHLEVLKDAGTWRG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf