Trimin1|351554|estExt_Genemark1.C_Ctg_930062 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351554
Unique Name	Trimin1\|351554\|estExt_Genemark1.C_Ctg_930062
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1044

Homology

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BLAST of jgi.p|Trimin1|351554 vs. uniprot
Match: A0A836C7A7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A7_9STRA)

HSP 1 Score: 1225 bits (3170), Expect = 0.000e+0
Identity = 1043/1043 (100.00%), Postives = 1043/1043 (100.00%), Query Frame = 0

Query:    1 MREKLMELRPQLMAHGGVAINDDEFWQWYRKERQAMRECTTAGLDKFDTPVITCPAKAPHVSAVGAAPQDDEGVASSDFAVRVLTLVTSGLLCDTAAVHGNDGVDIVDVSASGDDAEALSSAQVHLSKARLAKAIQPPVMAVTGELNLTGTPLXXXXXXXXXXXXXXXXXXXXXXXXXXEDVYMASMDSMSFAVRVMRPVKRRAADFLMRVVRPITSAQQCDKAASNDGDDIAVSGVTNVVDDTAVLSSAEAELVSVQLEEVDDAEEPLREPEEARVAAMEWEQQPVKRQDILAAYRPRTTDEEWSVVTISFSAQRQPSLCCFRTAHSSRLCAHVDVKLPGARLPHVEDAHHYLDSCNNHQQANFKPGSRTGSESGSVCTKNPSNCAVAIARGYGPSAQQVCTATAPIWRLLAKVVRGVLKLAIGVKLYLTTLFASAHPADIAGAIGMAAALIFACLRXXXXXXXXXRFTLKQFNRHLMLWAVALQQCADAERAAADAKAAEASIRAELEAAQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAXQQSAAAANDDTTNMRAERDAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLFTSQSAMETAREAWRERAEAAEAHWSKLKDGVALQVREKTEAVQAAAATDVQLLQEALRAAATAKSDAQQATARALKAEAAXXXXQQQNRAQEAVRRARATAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAXASQQHQQQRHPQQQQRPXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXHAQQYQQXXXXXXXXXXXXXXXXXAPEARAQQGHTXXXXXEQRWPRPGEGRGQRGNIVPGGQNRAMFGADRRDRTELQGATNARAGERQREPEGAESARQRGSSTTAAAPPEPMV 1043
            MREKLMELRPQLMAHGGVAINDDEFWQWYRKERQAMRECTTAGLDKFDTPVITCPAKAPHVSAVGAAPQDDEGVASSDFAVRVLTLVTSGLLCDTAAVHGNDGVDIVDVSASGDDAEALSSAQVHLSKARLAKAIQPPVMAVTGELNLTGTPLXXXXXXXXXXXXXXXXXXXXXXXXXXEDVYMASMDSMSFAVRVMRPVKRRAADFLMRVVRPITSAQQCDKAASNDGDDIAVSGVTNVVDDTAVLSSAEAELVSVQLEEVDDAEEPLREPEEARVAAMEWEQQPVKRQDILAAYRPRTTDEEWSVVTISFSAQRQPSLCCFRTAHSSRLCAHVDVKLPGARLPHVEDAHHYLDSCNNHQQANFKPGSRTGSESGSVCTKNPSNCAVAIARGYGPSAQQVCTATAPIWRLLAKVVRGVLKLAIGVKLYLTTLFASAHPADIAGAIGMAAALIFACLRXXXXXXXXXRFTLKQFNRHLMLWAVALQQCADAERAAADAKAAEASIRAELEAAQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAXQQSAAAANDDTTNMRAERDAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLFTSQSAMETAREAWRERAEAAEAHWSKLKDGVALQVREKTEAVQAAAATDVQLLQEALRAAATAKSDAQQATARALKAEAAXXXXQQQNRAQEAVRRARATAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAXASQQHQQQRHPQQQQRPXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXHAQQYQQXXXXXXXXXXXXXXXXXAPEARAQQGHTXXXXXEQRWPRPGEGRGQRGNIVPGGQNRAMFGADRRDRTELQGATNARAGERQREPEGAESARQRGSSTTAAAPPEPMV
Sbjct:    1 MREKLMELRPQLMAHGGVAINDDEFWQWYRKERQAMRECTTAGLDKFDTPVITCPAKAPHVSAVGAAPQDDEGVASSDFAVRVLTLVTSGLLCDTAAVHGNDGVDIVDVSASGDDAEALSSAQVHLSKARLAKAIQPPVMAVTGELNLTGTPLXXXXXXXXXXXXXXXXXXXXXXXXXXEDVYMASMDSMSFAVRVMRPVKRRAADFLMRVVRPITSAQQCDKAASNDGDDIAVSGVTNVVDDTAVLSSAEAELVSVQLEEVDDAEEPLREPEEARVAAMEWEQQPVKRQDILAAYRPRTTDEEWSVVTISFSAQRQPSLCCFRTAHSSRLCAHVDVKLPGARLPHVEDAHHYLDSCNNHQQANFKPGSRTGSESGSVCTKNPSNCAVAIARGYGPSAQQVCTATAPIWRLLAKVVRGVLKLAIGVKLYLTTLFASAHPADIAGAIGMAAALIFACLRXXXXXXXXXRFTLKQFNRHLMLWAVALQQCADAERAAADAKAAEASIRAELEAAQAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAXQQSAAAANDDTTNMRAERDAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLFTSQSAMETAREAWRERAEAAEAHWSKLKDGVALQVREKTEAVQAAAATDVQLLQEALRAAATAKSDAQQATARALKAEAAXXXXQQQNRAQEAVRRARATAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAXASQQHQQQRHPQQQQRPXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXHAQQYQQXXXXXXXXXXXXXXXXXAPEARAQQGHTXXXXXEQRWPRPGEGRGQRGNIVPGGQNRAMFGADRRDRTELQGATNARAGERQREPEGAESARQRGSSTTAAAPPEPMV 1043

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351554 vs. uniprot

BLAST of jgi.p|Trimin1|351554 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C7A7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 544..614
None	No IPR available	COILS	Coil	Coil	coord: 661..695
None	No IPR available	COILS	Coil	Coil	coord: 764..811
None	No IPR available	COILS	Coil	Coil	coord: 495..522
None	No IPR available	COILS	Coil	Coil	coord: 626..646
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 883..924
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 925..947
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 848..1043
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 852..882

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_93	contig	Contig_93:448251..461154 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351554	mRNA_12061	Tribonema minus UTEX_B_3156	mRNA	Contig_93 448251..461261 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351554|estExt_Genemark1.C_Ctg_930062 ID=Trimin1|351554|estExt_Genemark1.C_Ctg_930062|Name=jgi.p|Trimin1|351554|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1044bp
MREKLMELRPQLMAHGGVAINDDEFWQWYRKERQAMRECTTAGLDKFDTP
VITCPAKAPHVSAVGAAPQDDEGVASSDFAVRVLTLVTSGLLCDTAAVHG
NDGVDIVDVSASGDDAEALSSAQVHLSKARLAKAIQPPVMAVTGELNLTG
TPLCDLVAPGDNDDSVGGLAVNLSDARLAEDVYMASMDSMSFAVRVMRPV
KRRAADFLMRVVRPITSAQQCDKAASNDGDDIAVSGVTNVVDDTAVLSSA
EAELVSVQLEEVDDAEEPLREPEEARVAAMEWEQQPVKRQDILAAYRPRT
TDEEWSVVTISFSAQRQPSLCCFRTAHSSRLCAHVDVKLPGARLPHVEDA
HHYLDSCNNHQQANFKPGSRTGSESGSVCTKNPSNCAVAIARGYGPSAQQ
VCTATAPIWRLLAKVVRGVLKLAIGVKLYLTTLFASAHPADIAGAIGMAA
ALIFACLRRRRSRRRRRRFTLKQFNRHLMLWAVALQQCADAERAAADAKA
AEASIRAELEAAQAAAARAEHDAAAAHTAMEQLHAERDAAVTAADQANAV
AKAAEEQLRLEREAAAVAAEKAAAAVKSAQEQLRAERKAAAAAAEKAAAA
AKSTQEQLRTARKAALRHAATAAATEEELRAQLAAAQQSAAAANDDTTNM
RAERDAVAAAAATAEQRAAAANAMEEQLRARVALAEEDLAATRGRAAQRA
GAAEALCTKLFTSQSAMETAREAWRERAEAAEAHWSKLKDGVALQVREKT
EAVQAAAATDVQLLQEALRAAATAKSDAQQATARALKAEAAAAKQQQQNR
AQEAVRRARATAAAAPAAAVAVAAAPAATAPAAAAPAAAAPAAAAPAVAH
AAASQQHQQQRHPQQQQRPLQQQQRPPQQQQRPPQQQQRPPPPQQQQRPP
PPPQQQQRPPQQQQRPPPPQQQQQQPAPHAQQYQQQQQQQQQQEERQMAA
AAAPEARAQQGHTPPQRQEQRWPRPGEGRGQRGNIVPGGQNRAMFGADRR
DRTELQGATNARAGERQREPEGAESARQRGSSTTAAAPPEPMV*