Trimin1|351528|estExt_Genemark1.C_Ctg_930010 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351528
Unique NameTrimin1|351528|estExt_Genemark1.C_Ctg_930010
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length451
Homology
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BLAST of jgi.p|Trimin1|351528 vs. uniprot
Match: A0A836C6W7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W7_9STRA)

HSP 1 Score: 704 bits (1816), Expect = 8.120e-253
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0 
Query:    1 MQLTCTLPLRLLPLLPIQVDFWLLDARYRVAXXXXXXXXXXXXXVRQQRSAWAAAEGIMAGLFGRLRDLELARRACTKKAIDELLLKQTELTGKPRLXXXXXXXXXXLTAQPFVAACLARVALTPEALDKHIKEEAARKATSSIAPVAPAVAAEEGAPVPPXXXXXPAAPTDMGFMDHLVASLDSPLVLASEVLERKAKXXXXXXXXXXXXXXXXXXXXXSMTSRSFVTTLVVLTADHHLHMFDVKGKAPGSSAKATFDSLLLLAASNPLGNTHNTAAFDSLIPLIDAGARPNKTPKKYTIAPSATLDVSAFTAGKRGKQTKLVHASQFHVVEXXXXEVKANSGVKHFFKNESLSKESPLHWVXXXXXXXXXXXXXXXXXASLRARSEANCEEWLQRLYALCEPAAAEAAAEGRACACAQCAQLRGRLIARAGDHAAAPPPSPPHDALPL 450
            MQLTCTLPLRLLPLLPIQVDFWLLDARYRVAXXXXXXXXXXXXXVRQQRSAWAAAEGIMAGLFGRLRDLELARRACTKKAIDELLLKQTELTGKPRLXXXXXXXXXXLTAQPFVAACLARVALTPEALDKHIKEEAARKATSSIAPVAPAVAAEEGAPVPPXXXXXPAAPTDMGFMDHLVASLDSPLVLASEVLERKAKXXXXXXXXXXXXXXXXXXXXXSMTSRSFVTTLVVLTADHHLHMFDVKGKAPGSSAKATFDSLLLLAASNPLGNTHNTAAFDSLIPLIDAGARPNKTPKKYTIAPSATLDVSAFTAGKRGKQTKLVHASQFHVVEXXXXEVKANSGVKHFFKNESLSKESPLHWVXXXXXXXXXXXXXXXXXASLRARSEANCEEWLQRLYALCEPAAAEAAAEGRACACAQCAQLRGRLIARAGDHAAAPPPSPPHDALPL
Sbjct:    1 MQLTCTLPLRLLPLLPIQVDFWLLDARYRVAXXXXXXXXXXXXXVRQQRSAWAAAEGIMAGLFGRLRDLELARRACTKKAIDELLLKQTELTGKPRLXXXXXXXXXXLTAQPFVAACLARVALTPEALDKHIKEEAARKATSSIAPVAPAVAAEEGAPVPPXXXXXPAAPTDMGFMDHLVASLDSPLVLASEVLERKAKXXXXXXXXXXXXXXXXXXXXXSMTSRSFVTTLVVLTADHHLHMFDVKGKAPGSSAKATFDSLLLLAASNPLGNTHNTAAFDSLIPLIDAGARPNKTPKKYTIAPSATLDVSAFTAGKRGKQTKLVHASQFHVVEXXXXEVKANSGVKHFFKNESLSKESPLHWVXXXXXXXXXXXXXXXXXASLRARSEANCEEWLQRLYALCEPAAAEAAAEGRACACAQCAQLRGRLIARAGDHAAAPPPSPPHDALPL 450
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351528 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C6W7_9STRA8.120e-253100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:52141..60699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351528mRNA_12016Tribonema minus UTEX_B_3156 mRNAContig_93 52141..60699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351528|estExt_Genemark1.C_Ctg_930010 ID=Trimin1|351528|estExt_Genemark1.C_Ctg_930010|Name=jgi.p|Trimin1|351528|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=451bp
MQLTCTLPLRLLPLLPIQVDFWLLDARYRVAVDFWLLDARYRVAVRQQRS
AWAAAEGIMAGLFGRLRDLELARRACTKKAIDELLLKQTELTGKPRLLKQ
TELTGKPLTAQPFVAACLARVALTPEALDKHIKEEAARKATSSIAPVAPA
VAAEEGAPVPPPPAPEPAAPTDMGFMDHLVASLDSPLVLASEVLERKAKV
LERKAKVLERKAKVLERKAKSMTSRSFVTTLVVLTADHHLHMFDVKGKAP
GSSAKATFDSLLLLAASNPLGNTHNTAAFDSLIPLIDAGARPNKTPKKYT
IAPSATLDVSAFTAGKRGKQTKLVHASQFHVVEFHVVEVKANSGVKHFFK
NESLSKESPLHWVKANSGVKHFFKKESLSKASLRARSEANCEEWLQRLYA
LCEPAAAEAAAEGRACACAQCAQLRGRLIARAGDHAAAPPPSPPHDALPL
*
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