Trimin1|351503|estExt_Genemark1.C_Ctg_920023 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351503
Unique NameTrimin1|351503|estExt_Genemark1.C_Ctg_920023
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length138
Homology
BLAST of jgi.p|Trimin1|351503 vs. uniprot
Match: A0A835YRW5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 9.630e-103
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query:    1 MEEDEDAPHPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHRQSESFV 137
            MEEDEDAPHPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHRQSESFV
Sbjct:    1 MEEDEDAPHPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHRQSESFV 137          
BLAST of jgi.p|Trimin1|351503 vs. uniprot
Match: D7FGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX5_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.690e-48
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 0
Query:    9 HPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELK---EPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHRQS 133
            HPLRT +W +  R     +RE E  TFH++GT+ S     G WWFDVGGL+W++      + T  H++AELHWN+FG+QPRMFRGT+TRDR P+S +PPWL RPV+ +F G G+GDDTADT+Y+HRQ+
Sbjct:   65 HPLRTQDWTLQIRSSPWTRREQEV-TFHRNGTMSSNDGNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHRQT 191          
BLAST of jgi.p|Trimin1|351503 vs. uniprot
Match: A0A0G4EMR7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMR7_VITBC)

HSP 1 Score: 115 bits (287), Expect = 9.850e-30
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    3 EDEDAPHPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHR 131
            E +D+PHPLR  EW++  R+ L  +R +    F +DG++++     G W  D  G+ WE    + T   Y AE+HWN+FG+QPRM++G +TRDR         L RPVI TFTG G G DTAD +Y+ R
Sbjct:   55 EADDSPHPLRMEEWKLRVRRGLFRRRSEMRINFRRDGSLQTSDGHKGEWRLDKFGVMWEFLVDNTTH-RYMAEVHWNVFGSQPRMYKGVITRDRRAPIRAD--LFRPVIGTFTGIGCGTDTADVSYRDR 180          
BLAST of jgi.p|Trimin1|351503 vs. uniprot
Match: A0A7S2V1B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B7_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.690e-21
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   10 PLRTAEWRMSTRKLLGFKREDEYFTFHKDGT-----VESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDT 123
            PLR  +W +  R  L  +++     +H  G      + +     G W  +  GL W+++      T+Y A +H N FG  P+MFRG V RDR  SSF+PPWL RPV++TF G+G+G+DT
Sbjct:   78 PLRMEKWEIIFRTGLSERKQSSIQFYHTGGEDDKGDLRTDEGETGDWAMEKLGLQWQIRRNGVAYTYY-ALVHHNTFGAAPKMFRGVVVRDRFASSFLPPWLFRPVVATFHGHGVGEDT 195          
BLAST of jgi.p|Trimin1|351503 vs. uniprot
Match: A0A4D9CXA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXA1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.580e-19
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   37 KDGTVESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDT 123
            K   +  P    G+W +D  GL+WEL+E       Y AEL W+ FG +P+M  G V R+R P S +PPWLLRPV+ TF+G G G DT
Sbjct:   58 KKAKMAEPPTLQGKWKYDKYGLNWELEE-GGLRYFYHAELIWHSFGDRPKMHCGVVVRNRGPGSPLPPWLLRPVVGTFSGLGNGTDT 143          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351503 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YRW5_9STRA9.630e-103100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FGX5_ECTSI2.690e-4855.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4EMR7_VITBC9.850e-3043.41Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2V1B7_9STRA3.690e-2138.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CXA1_9STRA7.580e-1947.13Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_92contigContig_92:224495..225771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351503mRNA_14597Tribonema minus UTEX_B_3156 mRNAContig_92 224495..225905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351503|estExt_Genemark1.C_Ctg_920023 ID=Trimin1|351503|estExt_Genemark1.C_Ctg_920023|Name=jgi.p|Trimin1|351503|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=138bp
MEEDEDAPHPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGR
WWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSS
FMPPWLLRPVISTFTGYGIGDDTADTTYKHRQSESFV*
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