Trimin1|351497|estExt_Genemark1.C_Ctg_920017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351497
Unique Name	Trimin1\|351497\|estExt_Genemark1.C_Ctg_920017
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	186

Homology

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BLAST of jgi.p|Trimin1|351497 vs. uniprot
Match: A0A836C7X1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X1_9STRA)

HSP 1 Score: 357 bits (915), Expect = 2.490e-124
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0

Query:    1 MSEVWARLTQEEEELTRVRSEIADLKRALDASPFAPLTDQLSSQQAVQERLERLQARLPTLRKLAFKAELLLPVAVVWSELETSSQEEKFLKMKAWGQPLKLVASCPGEDIIFLQGKKGTAVDLTSTCHLLPTMRLKAVAFPLVSHGDRKPVMVDGFVSAITPSRRVALGVYHAATPTLSGGVVLD 186
            MSEVWARLTQEEEELTRVRSEIADLKRALDASPFAPLTDQLSSQQAVQERLERLQARLPTLRKLAFKAELLLPVAVVWSELETSSQEEKFLKMKAWGQPLKLVASCPGEDIIFLQGKKGTAVDLTSTCHLLPTMRLKAVAFPLVSHGDRKPVMVDGFVSAITPSRRVALGVYHAATPTLSGGVVLD
Sbjct:    1 MSEVWARLTQEEEELTRVRSEIADLKRALDASPFAPLTDQLSSQQAVQERLERLQARLPTLRKLAFKAELLLPVAVVWSELETSSQEEKFLKMKAWGQPLKLVASCPGEDIIFLQGKKGTAVDLTSTCHLLPTMRLKAVAFPLVSHGDRKPVMVDGFVSAITPSRRVALGVYHAATPTLSGGVVLD 186

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BLAST of jgi.p|Trimin1|351497 vs. uniprot
Match: A0A836C874_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C874_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.950e-29
Identity = 61/96 (63.54%), Postives = 76/96 (79.17%), Query Frame = 0

Query:   86 QEEKFLKMKAWGQPLKLVASCPGEDIIFLQGKKGTAVDLTSTCHLLPTMRLKAVAFPLVSHGDRK------PVMVDGFVSAITPSRRVALGVYHAA 175
            ++EKFL+MKAWGQPLKLVASCPGED+IFLQG+KGTA+DL S+ H+L  M+LKAV FPL  H + +      P+++DGFVSA+ PS RVALG   AA
Sbjct:  493 KKEKFLQMKAWGQPLKLVASCPGEDVIFLQGRKGTAIDLASSWHVLDRMKLKAVTFPLGPHENYRELARTPPLVMDGFVSAMAPSGRVALGSCSAA 588

[Close]

BLAST of jgi.p|Trimin1|351497 vs. uniprot
Match: A0A835YQ22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ22_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.690e-15
Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 0

Query:   86 QEEKFLKMKAWGQPLKLVASCPGEDIIFLQGKKGTAVDLTSTCHLLPT-MRLKAVAFPLVSHGD-------RKPVMVDGFVSAITPSRRVALGVYHAATPTLSGGVVLD 186
            Q E+FL+M+AWG PLKLVAS P ED+IF+QG+ G  +DL  T   L T M+L  +AFP+    D         P+   G +S IT ++R AL  Y    P   GG V D
Sbjct:  136 QNEEFLEMEAWGTPLKLVASFPAEDLIFVQGEPGPCIDLAHTRGALWTKMKLTVLAFPVPPFIDLNDDVAHEHPLASSGELSGITITQRAALAKYSPELPPSPGGAVFD 244

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351497 vs. uniprot

BLAST of jgi.p|Trimin1|351497 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836C7X1_9STRA	2.490e-124	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C874_9STRA	4.950e-29	63.54	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQ22_9STRA	5.690e-15	44.04	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	COILS	Coil	Coil	coord: 8..28

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_92	contig	Contig_92:196003..200095 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351497	mRNA_14591	Tribonema minus UTEX_B_3156	mRNA	Contig_92 196003..200095 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351497|estExt_Genemark1.C_Ctg_920017 ID=Trimin1|351497|estExt_Genemark1.C_Ctg_920017|Name=jgi.p|Trimin1|351497|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=186bp
MSEVWARLTQEEEELTRVRSEIADLKRALDASPFAPLTDQLSSQQAVQER
LERLQARLPTLRKLAFKAELLLPVAVVWSELETSSQEEKFLKMKAWGQPL
KLVASCPGEDIIFLQGKKGTAVDLTSTCHLLPTMRLKAVAFPLVSHGDRK
PVMVDGFVSAITPSRRVALGVYHAATPTLSGGVVLD