Trimin1|351481|estExt_Genemark1.C_Ctg_910042 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351481
Unique Name	Trimin1\|351481\|estExt_Genemark1.C_Ctg_910042
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	714

Homology

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BLAST of jgi.p|Trimin1|351481 vs. uniprot
Match: A0A835YJ98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ98_9STRA)

HSP 1 Score: 940 bits (2430), Expect = 0.000e+0
Identity = 713/713 (100.00%), Postives = 713/713 (100.00%), Query Frame = 0

Query:    1 MSEVSDEAVEIGETSIASYSQEYDEDSGFESEAASPLQRRPAQQQPQAHAAAHDAAAISAAAGQRLSAALDKRRRAEARRVQYISELATTKAALAAATKAHLALQGVVTDLQAEIGSYTSMVATKEEALAVVRALAQQQEQQIGDLKLRFERAQAQTEDERAAADLERALDVARAQHAAEMAAARAEMERVQQAAVAERGVLPEHHRALLXXXXXXXXTEIDRVKRWEEQAQAEAAKARRDAQLEAMHAQTLAKEGLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHLQQLAREQAELQSSRKKCSALMAQLKLREDDIGEREAQLAAREQGVCTRDRGRSRSYSPPAGAPCVMAGNGASPSALNFNRDLSADAAGSMYARQGSLSPSYGGAATRVDLESTSEADAQSPQPEEVGALAAAKAVLNYGALTLSRETSIKIARLKKQMQADKEKAVADAEXXXXXXXXSEKNSVQERVDRETSAAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEARGEERMAVLRDQLKAEFTSERQQLQQALEHAAETERENRQKLMNTYRAREKRLKEQMESTIHTLQSNLTLTTQRLEELEREKAGGVSAEGDTEGDTEEYKSXXXXXXXXXXXXXXXXXXXXXXXXRVVYEPVRGVAGSTTSGSSPGS 713
            MSEVSDEAVEIGETSIASYSQEYDEDSGFESEAASPLQRRPAQQQPQAHAAAHDAAAISAAAGQRLSAALDKRRRAEARRVQYISELATTKAALAAATKAHLALQGVVTDLQAEIGSYTSMVATKEEALAVVRALAQQQEQQIGDLKLRFERAQAQTEDERAAADLERALDVARAQHAAEMAAARAEMERVQQAAVAERGVLPEHHRALLXXXXXXXXTEIDRVKRWEEQAQAEAAKARRDAQLEAMHAQTLAKEGLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHLQQLAREQAELQSSRKKCSALMAQLKLREDDIGEREAQLAAREQGVCTRDRGRSRSYSPPAGAPCVMAGNGASPSALNFNRDLSADAAGSMYARQGSLSPSYGGAATRVDLESTSEADAQSPQPEEVGALAAAKAVLNYGALTLSRETSIKIARLKKQMQADKEKAVADAEXXXXXXXXSEKNSVQERVDRETSAAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEARGEERMAVLRDQLKAEFTSERQQLQQALEHAAETERENRQKLMNTYRAREKRLKEQMESTIHTLQSNLTLTTQRLEELEREKAGGVSAEGDTEGDTEEYKSXXXXXXXXXXXXXXXXXXXXXXXXRVVYEPVRGVAGSTTSGSSPGS
Sbjct:    1 MSEVSDEAVEIGETSIASYSQEYDEDSGFESEAASPLQRRPAQQQPQAHAAAHDAAAISAAAGQRLSAALDKRRRAEARRVQYISELATTKAALAAATKAHLALQGVVTDLQAEIGSYTSMVATKEEALAVVRALAQQQEQQIGDLKLRFERAQAQTEDERAAADLERALDVARAQHAAEMAAARAEMERVQQAAVAERGVLPEHHRALLXXXXXXXXTEIDRVKRWEEQAQAEAAKARRDAQLEAMHAQTLAKEGLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHLQQLAREQAELQSSRKKCSALMAQLKLREDDIGEREAQLAAREQGVCTRDRGRSRSYSPPAGAPCVMAGNGASPSALNFNRDLSADAAGSMYARQGSLSPSYGGAATRVDLESTSEADAQSPQPEEVGALAAAKAVLNYGALTLSRETSIKIARLKKQMQADKEKAVADAEXXXXXXXXSEKNSVQERVDRETSAAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEARGEERMAVLRDQLKAEFTSERQQLQQALEHAAETERENRQKLMNTYRAREKRLKEQMESTIHTLQSNLTLTTQRLEELEREKAGGVSAEGDTEGDTEEYKSXXXXXXXXXXXXXXXXXXXXXXXXRVVYEPVRGVAGSTTSGSSPGS 713

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351481 vs. uniprot

BLAST of jgi.p|Trimin1|351481 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YJ98_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..194
None	No IPR available	COILS	Coil	Coil	coord: 293..327
None	No IPR available	COILS	Coil	Coil	coord: 338..358
None	No IPR available	COILS	Coil	Coil	coord: 576..611
None	No IPR available	COILS	Coil	Coil	coord: 210..230
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	COILS	Coil	Coil	coord: 613..647
None	No IPR available	COILS	Coil	Coil	coord: 531..551
None	No IPR available	COILS	Coil	Coil	coord: 254..283
None	No IPR available	COILS	Coil	Coil	coord: 502..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..542
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 657..691
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 634..713
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 640..654

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_91	contig	Contig_91:507788..522738 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351481	mRNA_13526	Tribonema minus UTEX_B_3156	mRNA	Contig_91 507788..522796 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351481|estExt_Genemark1.C_Ctg_910042 ID=Trimin1|351481|estExt_Genemark1.C_Ctg_910042|Name=jgi.p|Trimin1|351481|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=714bp
MSEVSDEAVEIGETSIASYSQEYDEDSGFESEAASPLQRRPAQQQPQAHA
AAHDAAAISAAAGQRLSAALDKRRRAEARRVQYISELATTKAALAAATKA
HLALQGVVTDLQAEIGSYTSMVATKEEALAVVRALAQQQEQQIGDLKLRF
ERAQAQTEDERAAADLERALDVARAQHAAEMAAARAEMERVQQAAVAERG
VLPEHHRALLEHHKALLDTEIDRVKRWEEQAQAEAAKARRDAQLEAMHAQ
TLAKEGLEGDKKALQAEKQALVLEKQALVLEREEWRASVSAAEARMDAKA
AATEAAAARLEEERRQLTNQKAAFTTRAALLAPHLQQLAREQAELQSSRK
KCSALMAQLKLREDDIGEREAQLAAREQGVCTRDRGRSRSYSPPAGAPCV
MAGNGASPSALNFNRDLSADAAGSMYARQGSLSPSYGGAATRVDLESTSE
ADAQSPQPEEVGALAAAKAVLNYGALTLSRETSIKIARLKKQMQADKEKA
VADAEAKAAAELESEKNSVQERVDRETSAAREEARREAAEEEATVRRTIA
ESMRSELEKHVAAAEARGEERMAVLRDQLKAEFTSERQQLQQALEHAAET
ERENRQKLMNTYRAREKRLKEQMESTIHTLQSNLTLTTQRLEELEREKAG
GVSAEGDTEGDTEEYKSDEYDDDVYDSTEDESVEDESLEDERVVYEPVRG
VAGSTTSGSSPGS*