Trimin1|351469|estExt_Genemark1.C_Ctg_910027 (polypeptide) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|351469 vs. uniprot
Match: A0A836C8K9_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K9_9STRA) HSP 1 Score: 551 bits (1420), Expect = 3.670e-197 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MRQSRMLRNGERVPIDPAVLKVGDYVTLRGVVGADEALTSPGQAVQCVRYIRRKVRVIDQRMGRTTNTQSVHGYGAHTVSSLFGAIVSSMGGLLGGGLSVSRKTERDEWGMETQELSRQEGTARRMTLSGARGSIVLDLSGAEYLELETVQDDFENSQDVGSDGRRTLGYRTTEEXXXXXXXXXXXXXXXXXVLRVGASMIVIGEIGLTDHDGQETLVIRSSMPKNMLDIKTQSVARPFVASPLSESDLLNRIERAGRIYFWCAVPALVTGVALLAVTNRNYESLRYDQIAAASAARAAPSAPARAQRRR 310
MRQSRMLRNGERVPIDPAVLKVGDYVTLRGVVGADEALTSPGQAVQCVRYIRRKVRVIDQRMGRTTNTQSVHGYGAHTVSSLFGAIVSSMGGLLGGGLSVSRKTERDEWGMETQELSRQEGTARRMTLSGARGSIVLDLSGAEYLELETVQDDFENSQDVGSDGRRTLGYRTTEEXXXXXXXXXXXXXXXXXVLRVGASMIVIGEIGLTDHDGQETLVIRSSMPKNMLDIKTQSVARPFVASPLSESDLLNRIERAGRIYFWCAVPALVTGVALLAVTNRNYESLRYDQIAAASAARAAPSAPARAQRRR
Sbjct: 1 MRQSRMLRNGERVPIDPAVLKVGDYVTLRGVVGADEALTSPGQAVQCVRYIRRKVRVIDQRMGRTTNTQSVHGYGAHTVSSLFGAIVSSMGGLLGGGLSVSRKTERDEWGMETQELSRQEGTARRMTLSGARGSIVLDLSGAEYLELETVQDDFENSQDVGSDGRRTLGYRTTEEXXXXXXXXXXXXXXXXXVLRVGASMIVIGEIGLTDHDGQETLVIRSSMPKNMLDIKTQSVARPFVASPLSESDLLNRIERAGRIYFWCAVPALVTGVALLAVTNRNYESLRYDQIAAASAARAAPSAPARAQRRR 310
BLAST of jgi.p|Trimin1|351469 vs. uniprot
Match: D7FLV1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV1_ECTSI) HSP 1 Score: 139 bits (350), Expect = 4.370e-35 Identity = 104/297 (35.02%), Postives = 146/297 (49.16%), Query Frame = 0
Query: 1 MRQSRMLRNGERVPIDPAVLKVGDYVTLRGVVGAD-EALTSPGQAVQCVRYIRRKVRVIDQRMGRTTNTQSVHGYGAHTVSSLFGAIVSSMGGLLGGGLSVSRKTERDEWGMETQELSR----------------------QEGTARRMTLSGARGSIVLDLSGAEYLELETVQDDFENSQDVGSDGRRT-LGYRTTEEXXXXXXXXXXXXXXXXXVLRVGASMIVIGEIGLTDHDGQETLVIRSSMPKNMLDIKTQSVARPFVASPLSESDLLNRIERAGRIYFWCAVPALVTGVA 273
+ QS+ LR G D A L VGDYV +RG V A L SP + V CV Y VRV+D R + SV G + + G I S + L + + + + ++W Q +S Q GT +R R + +DL+GAE+ +E V +FE + G RT LGYRTTEE VL VG+ +IV+GE+G + +V+R + P ++LD+KT S++RPFVAS SE LL IER+GRIYFW A+P++ G+A
Sbjct: 35 LNQSKALRAGRVSRPDAASLAVGDYVRVRGTVSAGARTLQSPMKRVACVSYRVNVVRVVDSRTAK--KKASVGG-----IWGVLGGIASVVPWLCS--FAATAQVDTEKWDTVYQAISSRGETVQIFLDDHDSIADLEAVAQAGTGKR------RPRVRVDLAGAEFFSMEQVASEFEAEKATGKVSSRTQLGYRTTEE-----------------VLAVGSRLIVLGEVGEDPEGAEGDVVLRKAAPSSILDLKTTSISRPFVASIKSEQGLLQEIERSGRIYFWLALPSVAVGLA 299
BLAST of jgi.p|Trimin1|351469 vs. uniprot
Match: A0A6H5LN52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN52_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.980e-17 Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 0
Query: 193 VLRVGASMIVIGEIGLTDHDGQETLVIRSSMPKNMLDIKTQSVARPFVASPLSESDLLNRIERAGRIYFWCAVPALVTGVA 273
VL VG+ +IV+GE+G + +V+R + P ++LD+KT S++RPFVAS SE LL IER+GRIYFW A+P++ G+A
Sbjct: 3 VLAVGSRLIVLGEVGEDPEGAEGDVVLRKAAPSSILDLKTTSISRPFVASIKSEQGLLQEIERSGRIYFWLALPSVAVGLA 83 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351469 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|351469|estExt_Genemark1.C_Ctg_910027 ID=Trimin1|351469|estExt_Genemark1.C_Ctg_910027|Name=jgi.p|Trimin1|351469|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=311bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|