Trimin1|351466|estExt_Genemark1.C_Ctg_910023 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351466
Unique NameTrimin1|351466|estExt_Genemark1.C_Ctg_910023
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length393
Homology
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA)

HSP 1 Score: 666 bits (1718), Expect = 8.010e-240
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
Query:   50 LLCSQEHAVSMLAQMWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQMALKPPQQ 392
            LLCSQEHAVSMLAQMWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQMALKPPQQ
Sbjct:   50 LLCSQEHAVSMLAQMWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQMALKPPQQ 392          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 7.670e-40
Identity = 112/350 (32.00%), Postives = 163/350 (46.57%), Query Frame = 0
Query:   63 QMWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCLCMVGN--MLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA-GPLSIEGEQGEYMVTGSADKS--------------------VTALTCFKTSP-SGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPG-PNLYFMSGAEDGKMMMWQM 385
            +MW+T DG+ W +   V +T    V  L  V+  +   Y  P+A  A                                           +TV  +R+++L  G   + + V+S    +AH   IN +   K  A   V ++G +EG I AW   + G  F     LEGH R +T L    +  MLWS+S+D T+R+W+T T AC+  I    G GH+G V  +A G  + EG   EY+++GS D +                    V+A+  F  +P +  LLL+G +DG+IA+R+FP F+LAFE+    L VGH  PV ALLP   P   + YF+S  EDG MM W +
Sbjct:  131 KMWSTTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYAHLAD------------------------------------------VTVDALRVMDLTSG---STQEVVSSVTGFAHASRINRIMVAKVGAEPRV-YTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTITKDNG-GHEGPVAALAIGQSAAEGTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDGYFLSAGEDGTMMCWNV 433          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A5D6YFT1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFT1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.750e-19
Identity = 88/275 (32.00%), Postives = 119/275 (43.27%), Query Frame = 0
Query:  141 AGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCL--CMVG--NMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTC------------------------MAGPLSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQM 385
            AG   P    R + VGMIR  +L   +    E  +SD +P+AH+  +  L    DAAG   LFSGG +GLIR W+  A    F+  G LEGHVRGVT L   +VG  ++L SAS D                                                       +A PL       + +   + D  VTAL   + +   P+LL+G+ DG+I +++ P F+    LSAA  NVGH+  VR L      GP   F S   D KM+ WQ+
Sbjct:  188 AGFEGPFPFNRQLPVGMIRGWHLENQQQPPYEFRVSDSLPFAHSQGVLSLTVATDAAGNATLFSGGSDGLIRYWQLDAATNEFKCRGTLEGHVRGVTRLKTFVVGAASILASASMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPPL-------QQLFKETQDNPVTALCGTQDAAQTPVLLVGTSDGAITVKELPSFAYKTTLSAAA-NVGHQDAVRRLAI----GPLNTFFSVGNDRKMLAWQI 450          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A3M6VA38_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA38_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 8.750e-15
Identity = 74/263 (28.14%), Postives = 106/263 (40.30%), Query Frame = 0
Query:  146 PPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGT--GFQLGGVLEGHVRGVTCL--CMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGEQG-------------------EYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQM 385
            PP  +  ++VGM+R  NL   +    E V+S+ +P+AH   +  LA   D  G   LFSG  +G IR W+       F+ GGV+EGHVRGVT L    VG +   A                                                                 + +   + D  VTAL   + +   P+LLIG  DG+I++++ P F+    L A  LN GH+  VR +      GP+  F S   D KM+ WQ+
Sbjct:  173 PPNPK--VSVGMVRGWNLENPQTPPYEFVVSEAMPFAHKMNVQALAVATDRTGNATLFSGSADGCIRYWQMDTAINQFKCGGVMEGHVRGVTRLKTFAVGGVSILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTPPFQQLFKETQDSQVTALCGMQDAVQAPILLIGMADGTISVKELPSFAYKTTLGAD-LNHGHQDAVRRITI----GPSNTFFSTGNDRKMIAWQI 428          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: K3WP21_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP21_GLOUD)

HSP 1 Score: 81.6 bits (200), Expect = 3.120e-13
Identity = 72/256 (28.12%), Postives = 102/256 (39.84%), Query Frame = 0
Query:  153 ITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCL--CMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGEQG-------------------EYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQM 385
            + +GMIR  NL   +    E  +S+ +P+AHT  +  L    D AG   LFSG  +G IR W+  A    F+  G L+GHVRGVT L   +VG +   AS                                                                + M   + D  VTAL   +     P+LL+G+ DG+I +++ P F+    LS A  N+GH+  VR +      GP   F S   D KM+ WQ+
Sbjct:  186 VPIGMIRGWNLESPQQPPYEFRVSESLPFAHTQSVMSLTVATDTAGNATLFSGSADGSIRYWQLDAATNEFKCCGSLDGHVRGVTRLKTFVVGAVPILASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPPFQQMFKETQDNPVTALCGTQDVAQTPILLVGTADGAITVKELPSFAYKTTLSGAA-NIGHQEAVRRISI----GPLNTFFSVGNDRKMLAWQI 436          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A2D4CD19_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD19_PYTIN)

HSP 1 Score: 73.2 bits (178), Expect = 1.190e-10
Identity = 76/264 (28.79%), Postives = 104/264 (39.39%), Query Frame = 0
Query:  153 ITVGMIRMLNLRGGEPAAV-EVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTG--FQLGGVLEGHVRGVTCL--CMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTC--------------------------MAGPLSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQM 385
            ++VGMIR  NL    PA   E   SD +P+AH   +  LA   D  G   LFSG  +G IR W+   T   F+  GVLEGHVRGVT L   ++G     AS                                                           MA P S   ++ +       D  VTAL   + +   P+LL+G+ DG+I +++ P F+          N GH+  VR +    + GP   F S   D KM+ WQ+
Sbjct:   88 VSVGMIRGWNLEN--PAQTFEFRASDAMPFAHPTHVMSLAVATDPRGGATLFSGSFDGSIRYWQLDPTTNEFKCRGVLEGHVRGVTRLKTFVLGTTTVLASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMAPPFSPVFQETQ-------DSQVTALCGTQDAAQTPILLVGTADGAITVKELPTFAYKTTYQQGA-NFGHQDAVRRI----VTGPMNTFXSVGTDRKMIAWQI 337          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A8K1FKC1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKC1_PYTOL)

HSP 1 Score: 73.6 bits (179), Expect = 1.310e-10
Identity = 73/264 (27.65%), Postives = 103/264 (39.02%), Query Frame = 0
Query:  153 ITVGMIRMLNLRGGEPAAV-EVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTG--FQLGGVLEGHVRGVTCL--CMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTC--------------------------MAGPLSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQM 385
            + VGMIR  NL    PA   E  +S+++P+AH  P+  LA   D  G   LFSG  +G IR W+   T   F+  G L+GHVR VT L   ++G     AS                                                           MA P        + +   + D  VTAL   +     P+LLIG+ DG+I +++ P F+      A   N GH+  VR +      GP+  F S   D +M+ WQ+
Sbjct:  164 VPVGMIRGWNL--DNPAQTFEFHVSEQMPFAHGMPVQSLAVATDPTGNATLFSGSTDGTIRYWQLDATTNQFKCRGTLDGHVRSVTRLKTFVMGTAPILASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMAPPF-------QQLFKETQDSPVTALCGTQDVTQAPILLIGTADGAITVKELPSFAYKTTFVARA-NFGHQDTVRRIAT----GPHNTFFSVGNDRRMLAWQV 413          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: F0VYK9_9STRA (Uncharacterized protein AlNc14C1G16 n=3 Tax=Albugo TaxID=65356 RepID=F0VYK9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.720e-10
Identity = 71/258 (27.52%), Postives = 100/258 (38.76%), Query Frame = 0
Query:  153 ITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTG--FQLGGVLEGHVRGVTCL--CMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGE---------------------QGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQM 385
            ++VGMIR  NL   +    E   ++   +AHT  +  LA   D++G   LFSG  +G I+ WK       F+  G LEGH RGVT L   ++  M   A                                                                 Q  +  T S    VTA+   + + S P+LLIGS DGSI +++ P F+    LS +  N GH+  VR +    I GP+    S   D KM+ WQ+
Sbjct:  159 LSVGMIRAWNLEMPQMPPFEFYTNESSKHAHTMNVLSLAVATDSSGGATLFSGSADGSIKYWKLDPVANVFRCSGTLEGHTRGVTRLKTTLISTMPVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPPFQQVFKETQSCQ--VTAICGAQDAISQPILLIGSTDGSITIKELPTFAYKTTLSTSA-NYGHQDAVRRI----ISGPHNTLFSVGNDRKMIAWQI 409          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A5J6N902_CYMEN (Zinc finger CCCH domain-containing protein 17-like isoform X5 n=1 Tax=Cymbidium ensifolium TaxID=78740 RepID=A0A5J6N902_CYMEN)

HSP 1 Score: 72.8 bits (177), Expect = 2.400e-10
Identity = 56/208 (26.92%), Postives = 90/208 (43.27%), Query Frame = 0
Query:  196 AAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGP-----------LSIEGEQGEYMVTGSADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQMALKPP 390
            A G  +LF+G  +G I AWK  A G  F+    L GH+  V  L +    L+SAS DHT+RVWD  T+ C+ I+     +                       ++ +    E   T + +K V AL     + + P+L    +D ++ L D P FS    + +       +  +RA+      GP   F +G E G++ +W+   + P
Sbjct:  229 AVGNEMLFAGIQDGRILAWKFIAVGNRFEPAASLSGHLLAVVSLVVGAMRLYSASMDHTIRVWDICTLQCIQILTDHTSVXXXXXXXXXXXXXXXXXXXXXXXVATDSGNLEVTYTHNEEKGVVALCGMHDAQNKPVLFSSCNDNTVRLYDLPSFSERGRIYS-------KQDIRAIQA----GPGGLFFTGDETGEIKVWKWLNEVP 425          
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Match: A0A8B8JTB6_ABRPR (zinc finger CCCH domain-containing protein 17-like n=4 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JTB6_ABRPR)

HSP 1 Score: 68.2 bits (165), Expect = 7.800e-9
Identity = 53/205 (25.85%), Postives = 91/205 (44.39%), Query Frame = 0
Query:  202 LFSGGDEGLIRAWKAQG-----TGFQLGGVLEGHVRGVTCLCMVGNMLWSASKDHTVRVWDTATMAC-------LGIIGSTGGLGH---KGAVTCMAGPLSIEGEQGEYMVTGS--ADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQMALKP 389
            LF+  + G+I AW+        T F+L   L GH + V CL + G ML+S SKD +++VWD  T+ C       + ++ S     H     +  C    + +  E+G   VT +   +  V +L     +   P+L +   D S+ + + P FS    + A       +  VR++    + GP   F +G   G + +W+   +P
Sbjct:  239 LFAAAENGIISAWRGSSSSEATTPFELVASLTGHTKAVVCLAVGGKMLFSGSKDQSMKVWDLDTLQCKMTLNEHIDVVTSLICWDHYLLSSSSDCTI-KIWVATEEGTLKVTYTHREENDVVSLFGMTNAEEKPILFVSCIDNSVRMYELPSFSERGRIFA-------KREVRSM----VLGPGGLFFTGDGTGLLKVWKWLEEP 431          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351466 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A835YKE1_9STRA8.010e-240100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D8LJM7_ECTSI7.670e-4032.00C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A5D6YFT1_9STRA3.750e-1932.00Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6VA38_9STRA8.750e-1528.14Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
K3WP21_GLOUD3.120e-1328.13Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4CD19_PYTIN1.190e-1028.79Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1FKC1_PYTOL1.310e-1027.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0VYK9_9STRA1.720e-1027.52Uncharacterized protein AlNc14C1G16 n=3 Tax=Albugo... [more]
A0A5J6N902_CYMEN2.400e-1026.92Zinc finger CCCH domain-containing protein 17-like... [more]
A0A8B8JTB6_ABRPR7.800e-925.85zinc finger CCCH domain-containing protein 17-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 168..215
e-value: 9.4
score: 10.8
coord: 298..333
e-value: 1.6
score: 15.8
coord: 220..257
e-value: 4.4E-5
score: 32.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 222..257
e-value: 8.9E-5
score: 23.2
coord: 308..329
e-value: 0.031
score: 15.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 227..266
score: 10.34136
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 310..391
e-value: 1.8E-5
score: 26.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 151..309
e-value: 4.4E-22
score: 80.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..132
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 182..385
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 227..257
score: 8.676514
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 181..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:361926..369691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351466mRNA_13505Tribonema minus UTEX_B_3156 mRNAContig_91 361473..369691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351466|estExt_Genemark1.C_Ctg_910023 ID=Trimin1|351466|estExt_Genemark1.C_Ctg_910023|Name=jgi.p|Trimin1|351466|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=393bp
MLITAGAALLLLLLLLLLPLLLLPSPLLLLLAVLLLLLLLLLLLLLLAVL
LCSQEHAVSMLAQMWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACA
YEAPFALAAQPPPAARAPSPPPQQQRGYGGAPGALRGDDAAGALQPPRAE
RMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGAL
VLFSGGDEGLIRAWKAQGTGFQLGGVLEGHVRGVTCLCMVGNMLWSASKD
HTVRVWDTATMACLGIIGSTGGLGHKGAVTCMAGPLSIEGEQGEYMVTGS
ADKSVTALTCFKTSPSGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNV
GHRTPVRALLPLEIPGPNLYFMSGAEDGKMMMWQMALKPPQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf