Trimin1|351329|estExt_Genemark1.C_Ctg_870045 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351329
Unique NameTrimin1|351329|estExt_Genemark1.C_Ctg_870045
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length459
Homology
BLAST of jgi.p|Trimin1|351329 vs. uniprot
Match: A0A836C7V4_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7V4_9STRA)

HSP 1 Score: 517 bits (1331), Expect = 7.810e-179
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0
Query:    1 MLYAQQRRRARTQHGDADTLASALESGDRTWYCVPQRIGNSLLLCGRKQSRWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLGVVLFFLSATACGDPGIVYGTYTQQQARELEEWRLRGGNDAALPPSAQHMAVMAHACGPTAAAPLNTPAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKRAAHPLSPSLGPGGLRPDSEAGDPRDGGQAGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLTVCGQCGVLRGAAAVHXXXXXXCYNDMDHHCPWMSKVSADAAXXXXXXXXXXXXXXXXXVEICVAKKTLWSFYAFLVALATMVPFMAACLLVPPFLAML 458
            MLYAQQRRRARTQHGDADTLASALESGDRTWYCVPQRIGNSLLLCGRKQSRWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLGVVLFFLSATACGDPGIVYGTYTQQQARELEEWRLRGGNDAALPPSAQHMAVMAHACGPTAAAPLNTPAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKRAAHPLSPSLGPGGLRPDSEAGDPRDGGQAGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLTVCGQCGVLRGAAAVHXXXXXXCYNDMDHHCPWMSKVSADAAXXXXXXXXXXXXXXXXXVEICVAKKTLWSFYAFLVALATMVPFMAACLLVPPFLAML
Sbjct:    1 MLYAQQRRRARTQHGDADTLASALESGDRTWYCVPQRIGNSLLLCGRKQSRWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLGVVLFFLSATACGDPGIVYGTYTQQQARELEEWRLRGGNDAALPPSAQHMAVMAHACGPTAAAPLNTPAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKRAAHPLSPSLGPGGLRPDSEAGDPRDGGQAGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLTVCGQCGVLRGAAAVHXXXXXXCYNDMDHHCPWMSKVSADAAXXXXXXXXXXXXXXXXXVEICVAKKTLWSFYAFLVALATMVPFMAACLLVPPFLAML 458          
BLAST of jgi.p|Trimin1|351329 vs. uniprot
Match: A0A6H5KUF9_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF9_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.970e-17
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 0
Query:   26 SGDRTWYCVPQRIGNSLLLCGRKQSRWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLGVVLFFLSATACGDPGIVYGTYTQQ---QARELEEWRLRGGN----DAALPPSA 146
            +GD T+YC P+R+GN++LLCG K+ R+P HC++GP+W C    Y +++      ++ ++   + +A+ +V +    +L   S TAC DPGIVY    ++    A    E   RGG     DA LPP A
Sbjct:   18 AGDPTFYCGPRRVGNTILLCGTKEGRFPQHCLVGPNWMCMLATYGLVLTPTLALLILVTGAKYWVASFIVCITGSALLLAFSMTACSDPGIVYRPAERRIPPPAAVGGESGGRGGETAVADATLPPMA 145          
BLAST of jgi.p|Trimin1|351329 vs. uniprot
Match: A0A7S2V8J0_9STRA (Palmitoyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8J0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.540e-14
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0
Query:   31 WYCVPQRIGNSLLLCGRKQSRWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLGVVLFFLSATACGDPGIVYGTYTQQQARE-------LEEWRLRGGNDA 140
            +Y  P  IG ++L+CG+K+SR+P  C++GPDW C  L Y +I V    FI + +   HP    V ++   ++L   S TAC DPG +Y        R         +E R + GNDA
Sbjct:   23 FYFTPHMIGRTVLICGKKRSRFPFQCLVGPDWHCMLLTYTLIGVPSGLFIHYAAYLLHPAVFIVAILSTMLLLLLFSLTACSDPGTIYQEVGGDSRRSNGEGGVSRDETRRQRGNDA 139          
BLAST of jgi.p|Trimin1|351329 vs. uniprot
Match: A0A6U4K2Y5_9STRA (Palmitoyltransferase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K2Y5_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.770e-7
Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   35 PQRIGNSLLLCGRKQSRWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLGVVLFFLSATACGDPGIVYGTYTQQQA 126
            P R  N +LL G ++S     C++GPDW+C  + YV+I+V    F++ +++  H I   + ++   + ++  + TAC DPGIVY     Q+A
Sbjct:   32 PHRFANMVLLMGSRRSG---ACIVGPDWFCMLVTYVLILVPSSFFLINVASRMHVIVLVIGLLGASLTVWAFTMTACADPGIVYRRRAGQRA 120          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351329 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836C7V4_9STRA7.810e-179100.00Palmitoyltransferase n=1 Tax=Tribonema minus TaxID... [more]
A0A6H5KUF9_9PHAE1.970e-1736.72Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A7S2V8J0_9STRA7.540e-1435.90Palmitoyltransferase n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U4K2Y5_9STRA2.770e-733.70Palmitoyltransferase n=2 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 360..394
e-value: 3.3E-8
score: 33.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..350
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 72..446
NoneNo IPR availablePROSITEPS50216DHHCcoord: 360..394
score: 14.823381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_87contigContig_87:391490..396002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351329mRNA_14771Tribonema minus UTEX_B_3156 mRNAContig_87 391384..396030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351329|estExt_Genemark1.C_Ctg_870045 ID=Trimin1|351329|estExt_Genemark1.C_Ctg_870045|Name=jgi.p|Trimin1|351329|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=459bp
MLYAQQRRRARTQHGDADTLASALESGDRTWYCVPQRIGNSLLLCGRKQS
RWPLHCMIGPDWWCTALLYVMIVVLPCCFIVFLSNTDHPIATTVVMVQLG
VVLFFLSATACGDPGIVYGTYTQQQARELEEWRLRGGNDAALPPSAQHMA
VMAHACGPTAAAPLNTPAGAAPPSAAAANGAPFAVKPQLPYPTHTPVMAQ
APATSTAAGAALAKRAAHPLSPSLGPGGLRPDSEAGDPRDGGQAGGVAAA
ARAATVSNGDAEAGERRRRSAEPLLLLSDVDGEEDGAQQQRSDAPPPPPP
LLPGGAADGGAAAGQRAPGTAAAAPPLPPSPVAQLLGAAPATVPSPPSSE
GGGAVGGGLTVCGQCGVLRGAAAVHCGACGVCYNDMDHHCPWMSKVSADA
AAAPAAATAAAAARARARVEICVAKKTLWSFYAFLVALATMVPFMAACLL
VPPFLAML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC