Trimin1|351322|estExt_Genemark1.C_Ctg_870032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351322
Unique NameTrimin1|351322|estExt_Genemark1.C_Ctg_870032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length279
Homology
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA)

HSP 1 Score: 503 bits (1296), Expect = 2.470e-179
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
Query:    1 MALKVTAAAVVASLCGVEGFMTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAPATMPVEQKASTMA 278
            MALKVTAAAVVASLCGVEGFMTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAPATMPVEQKASTMA
Sbjct:    1 MALKVTAAAVVASLCGVEGFMTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAPATMPVEQKASTMA 278          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 1.160e-103
Identity = 165/246 (67.07%), Postives = 204/246 (82.93%), Query Frame = 0
Query:   23 MSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAPATM 268
            MSGD +APF+A KALK+ISG+  FD++LV KVA AA AGG TH+DIA DP+LV+ AK  + +V +CVSA++PEL   CV+AGA+MVELGNFD FYDQG+ F+A+DV+ MT+ TRALLP TPLSVT+PH L +D QV LA  L+ LGVDVIQTEGK+SLDPS GG+QG IERAAP LAA +AI++AV IPVM +SG+S+VTA MALAAGA GVGVGSAVNKLN+++ M+AVVRA+A AM LP P+ +
Sbjct:   26 MSGDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVS-NVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVSIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPKPSAV 270          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI)

HSP 1 Score: 254 bits (649), Expect = 1.790e-80
Identity = 138/237 (58.23%), Postives = 178/237 (75.11%), Query Frame = 0
Query:   26 DAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDL 262
            D + PF   KA K+I+G+ NF+ E V ++  AA+ GGATH+DIA DPELVKLA     SV +CVSA+EPEL VP V AGA MVE+GN+D FY +G  F A++V+ +T+ TR LLP  PLSVT+PH L +  QV LA+ L+  G D+IQTEG  S  P+  G+ G+IE+A+P LAA Y+I+RAV IPVM +SGIS+VTASMA+AAGA+GVGVGSA+NKLN+ +AMIA  RA+A A+ L
Sbjct:   67 DVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLT-SVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFYAEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAPTQAGVAGMIEKASPTLAAAYSISRAVSIPVMCASGISDVTASMAIAAGAAGVGVGSAINKLNSGIAMIAATRAIANALGL 302          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: A0A8J7JEE1_9CYAN (DUF561 domain-containing protein n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7JEE1_9CYAN)

HSP 1 Score: 249 bits (636), Expect = 2.080e-79
Identity = 140/240 (58.33%), Postives = 177/240 (73.75%), Query Frame = 0
Query:   21 MTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAM 260
            MT++      F  H ALKIISG+ NFD + V     AA AGGAT +DIAADP+LV+LA+   P + IC SA+EPE LV  VEAGAD++E+GNFD FY QG  F A++V+ +T  TR LLP   LSVT+PH L +DQQV LAQAL E+G D+IQTEG  S  P+  G  G++E+AAP LAA Y+IARAV +PV+ +SG+S+VTA MA+AAGASGVGVGSA+N+LN +VAM+A VR L  A+
Sbjct:    1 MTINLQLQQAFAQHNALKIISGLNNFDRDRVAATVKAATAGGATFVDIAADPDLVRLARHLTP-LPICTSAVEPEKLVRAVEAGADLIEIGNFDSFYAQGRRFEANEVLELTGQTRELLPNIALSVTVPHILELDQQVELAQALVEVGADIIQTEGGTSSAPTHAGTLGLVEKAAPTLAAAYSIARAVSVPVLCASGLSDVTAPMAIAAGASGVGVGSAINQLNDEVAMVAAVRRLVEAL 239          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: K9UJB9_CHAP6 (Pyruvate/oxaloacetate carboxyltransferase n=4 Tax=Chamaesiphon TaxID=217161 RepID=K9UJB9_CHAP6)

HSP 1 Score: 248 bits (633), Expect = 5.720e-79
Identity = 136/240 (56.67%), Postives = 179/240 (74.58%), Query Frame = 0
Query:   21 MTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAM 260
            M M       F +++ LK+ISG+ NFD + V  V  AA  GGAT +DIAADPELV++A++   ++ ICVSA+EPEL V  VEAGAD++E+GNFD FY QG+ F AD+V+ +TKATRALLP   LSVT+PH L +D+QV LAQAL   G D+IQTEG     PS  G  G+IE+AAP LAA Y I+RAV++PV+ +SG+S VTA +A++AGA+G+GVGSA+NKLN ++A IAVVR+L  A+
Sbjct:    1 MNMLNSLQTAFASNRVLKVISGLNNFDRDRVAMVVRAADLGGATFIDIAADPELVRMARQLT-NLPICVSAVEPELFVAAVEAGADLIEIGNFDSFYAQGIRFEADEVLALTKATRALLPHITLSVTVPHILTLDKQVELAQALVAAGADIIQTEGGTGSTPSHAGTLGLIEKAAPTLAAAYEISRAVEVPVLCASGLSNVTAPLAISAGAAGIGVGSAINKLNDEIAAIAVVRSLVEAL 239          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: A0A2G7GCB4_9CHRO (Uncharacterized protein n=3 Tax=Chroococcales TaxID=1118 RepID=A0A2G7GCB4_9CHRO)

HSP 1 Score: 246 bits (627), Expect = 4.630e-78
Identity = 137/240 (57.08%), Postives = 178/240 (74.17%), Query Frame = 0
Query:   21 MTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAM 260
            MTM  +    F   + LKIISG+ NFDS+ V    +AA  GGAT +DIAAD ELVKLA R+  ++ +C+SA+EPE  V  VEAGAD++E+GNFD FY QG  F A +V+ +T+ATR+LLP+  LSVT+PH L +DQQV LA+ L E G D+IQTEG  S  P+  G  G+IE+AAP LAA Y I+RAV +PV+ +SGIS VTA +A+AAGA+GVGVGSA+N+LN++VAMIA VR+L  A+
Sbjct:    1 MTMHPEMQRAFEQRRVLKIISGLNNFDSQRVAATVIAADRGGATFVDIAADAELVKLA-RSLTNLPVCISAVEPEKFVVAVEAGADLIEIGNFDSFYAQGRRFEAAEVLELTQATRSLLPQITLSVTVPHILELDQQVQLAEELVEAGADIIQTEGGTSTQPAHPGTLGLIEKAAPTLAAAYEISRAVSVPVLCASGISSVTAPLAIAAGAAGVGVGSAINQLNSEVAMIAAVRSLVDAL 239          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: UPI001882BC92 (DUF561 domain-containing protein n=1 Tax=Cyanobacterium stanieri TaxID=102235 RepID=UPI001882BC92)

HSP 1 Score: 245 bits (626), Expect = 6.350e-78
Identity = 139/236 (58.90%), Postives = 181/236 (76.69%), Query Frame = 0
Query:   26 DAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMD 261
            DAIA     KALK+ISG+ NFD   V  V  AAQ GGAT +DIAAD E++K  K +   + +CVSA+EP+L V  VEAGAD++E+GNFD FY QG++F+A+DV+++T+ TRALLP   LSVT+PH L +D+QV LAQ L+  G D+IQTEG  S +P+  G+ G+IE+A+P LAA +AI+RAV IPV+ +SG+S+VT  MA+A GASGVGVGSAVNKLN QVAMIAVVR+L  A++
Sbjct:    8 DAIAH---KKALKVISGLNNFDVANVVAVCRAAQLGGATFVDIAADVEIIKAVKESI-DLPVCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLSLTRQTRALLPHVLLSVTVPHTLPLDEQVELAQKLEAEGADIIQTEGGTSSNPNHSGILGLIEKASPTLAAAHAISRAVQIPVLCASGLSDVTVPMAIATGASGVGVGSAVNKLNDQVAMIAVVRSLVEALN 239          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: A0A1E5QXG4_9CHRO (Uncharacterized protein n=2 Tax=unclassified Cyanobacterium TaxID=2629879 RepID=A0A1E5QXG4_9CHRO)

HSP 1 Score: 244 bits (624), Expect = 1.270e-77
Identity = 132/227 (58.15%), Postives = 177/227 (77.97%), Query Frame = 0
Query:   35 KALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMD 261
            KALK+ISG+ NFD   V+ V  AA+ GGAT +DIAAD E++K  K +  ++ +CVSA+EP+L V  VEAGAD++E+GNFD FY QG++F+A+DV+ +T+ TRALLP   LSVT+PH L + +QV LAQAL+  G D+IQTEG  S  P+  G+ G+IE+A+P LAA +AI++AV IPV+ +SG+S+VT  MA+A GASGVGVGSAVNKLN +VAM+AVVR+L  A+D
Sbjct:   14 KALKVISGLNNFDLANVKAVCKAAELGGATFVDIAADVEIIKAVKESI-NIPVCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLNLTRQTRALLPNILLSVTVPHTLPLHEQVELAQALEAAGADIIQTEGGTSSKPNHSGILGLIEKASPTLAAAHAISKAVQIPVLCASGLSDVTVPMAIATGASGVGVGSAVNKLNDEVAMMAVVRSLVEALD 239          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: K9Z1M6_CYAAP (Uncharacterized protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=K9Z1M6_CYAAP)

HSP 1 Score: 244 bits (624), Expect = 1.320e-77
Identity = 133/231 (57.58%), Postives = 180/231 (77.92%), Query Frame = 0
Query:   31 FRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMD 261
            F + KALK+ISG+ NFD E V  V  +A+ GGAT +DIAAD +L+K  ++   S+ ICVSA+  E+L   V+ GAD+VE+GNFD FY QG+ F+A+DV+ +T+ TR LLP+T LSVT+PH L +D+QV LAQAL   G D+IQTEG  S +P+  G+ G+IE+A+P LAA YA++RAV++PVM +SG+S+VTA MA+A+GASG+GVGSA+NKLN QVAMIAVVR+L  A++
Sbjct:   11 FASKKALKVISGLNNFDVENVTAVCKSAELGGATFVDIAADMDLIKTVRQLI-SLPICVSAVSAEILAQAVDNGADLVEIGNFDSFYAQGITFSAEDVLNLTRETRKLLPETTLSVTVPHILALDEQVELAQALVASGADIIQTEGGTSSNPNHSGILGLIEKASPTLAAAYALSRAVEVPVMCASGLSDVTAPMAIASGASGIGVGSAINKLNDQVAMIAVVRSLVEALN 240          
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Match: A0A0D6ACD4_9CHRO (IMP dehydrogenase/GMP reductase n=1 Tax=Geminocystis sp. NIES-3708 TaxID=1615909 RepID=A0A0D6ACD4_9CHRO)

HSP 1 Score: 244 bits (623), Expect = 1.870e-77
Identity = 134/226 (59.29%), Postives = 175/226 (77.43%), Query Frame = 0
Query:   31 FRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRAL 256
            F   KALK+ISG+ NFD + V  V  AA+ GGAT +DIAAD  L+K  ++   ++ ICVSA++PELL   VEAGAD+VE+GNFD FY QG+ FTA+DV+ +T+ TRALLP   LSVT+PH L +D+QV LAQAL   G D+IQTEG  S +P+  G+ G+IE+A+P LA  +AI+RAV++PVM +SG+S+VTA MA++AGA G+GVGSAVNKLN Q+AMIAVVR+L
Sbjct:   11 FATKKALKVISGLNNFDVDNVVAVCKAAELGGATFVDIAADVNLIKTVRQLI-NLPICVSAVKPELLANAVEAGADLVEIGNFDSFYAQGITFTAEDVLRLTRETRALLPNITLSVTVPHTLPLDEQVELAQALVTQGADIIQTEGGTSSNPNHSGVLGLIEKASPTLATAHAISRAVEVPVMCASGLSDVTAPMAISAGADGIGVGSAVNKLNDQIAMIAVVRSL 235          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351322 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK10_9STRA2.470e-179100.00Uncharacterized protein ycf23 n=1 Tax=Tribonema mi... [more]
D7FIP5_ECTSI1.160e-10367.07Uncharacterized protein ycf23 n=2 Tax=Ectocarpus T... [more]
A0A1Y1HWD8_KLENI1.790e-8058.23Uncharacterized protein ycf23 n=1 Tax=Klebsormidiu... [more]
A0A8J7JEE1_9CYAN2.080e-7958.33DUF561 domain-containing protein n=1 Tax=Lusitanie... [more]
K9UJB9_CHAP65.720e-7956.67Pyruvate/oxaloacetate carboxyltransferase n=4 Tax=... [more]
A0A2G7GCB4_9CHRO4.630e-7857.08Uncharacterized protein n=3 Tax=Chroococcales TaxI... [more]
UPI001882BC926.350e-7858.90DUF561 domain-containing protein n=1 Tax=Cyanobact... [more]
A0A1E5QXG4_9CHRO1.270e-7758.15Uncharacterized protein n=2 Tax=unclassified Cyano... [more]
K9Z1M6_CYAAP1.320e-7757.58Uncharacterized protein n=4 Tax=Cyanobacteria TaxI... [more]
A0A0D6ACD4_9CHRO1.870e-7759.29IMP dehydrogenase/GMP reductase n=1 Tax=Geminocyst... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007570Uncharacterised protein family Ycf23PFAMPF04481DUF561coord: 31..259
e-value: 1.7E-87
score: 292.7
IPR007570Uncharacterised protein family Ycf23PANTHERPTHR36895FAMILY NOT NAMEDcoord: 27..268
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 39..252
e-value: 1.2E-7
score: 33.1
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 46..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_87contigContig_87:245854..251156 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351322mRNA_14760Tribonema minus UTEX_B_3156 mRNAContig_87 245733..251319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351322|estExt_Genemark1.C_Ctg_870032 ID=Trimin1|351322|estExt_Genemark1.C_Ctg_870032|Name=jgi.p|Trimin1|351322|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=279bp
MALKVTAAAVVASLCGVEGFMTMSGDAIAPFRAHKALKIISGITNFDSEL
VRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPC
VEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPH
KLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAA
TYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMI
AVVRALAIAMDLPAPATMPVEQKASTMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007570Uncharacterised_Ycf23
IPR013785Aldolase_TIM