Trimin1|351307|estExt_Genemark1.C_Ctg_860062 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351307
Unique NameTrimin1|351307|estExt_Genemark1.C_Ctg_860062
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1015
Homology
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 1587 bits (4110), Expect = 0.000e+0
Identity = 1014/1014 (100.00%), Postives = 1014/1014 (100.00%), Query Frame = 0
Query:    1 MQKTGRTAAASDSSAKHAPEGSPSPPLARAAGGGSAVGKSGVSGGTGADADGSMTVTQHQQSSVIGPADAVTPPMGAANSAAAPPPIPGVTPLQMEPAHPQFAIYPPYISTGGGGVGEEQPTPTLSMHGGGPATFGDLIDTRFLDSPMPDTAGSGLIGFPVAPHAFSAERHDHHRPPQVFTQHFAPPPQPFPGAYANMWPEGVPLGMSPPPPHNYGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPPGGXXXXXXXXFMDGGLGGHHXXXXXXXXXXXXXXXPAIPTVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAADEQXXXXXXXXXXXXXXXXXXXANQHFPLQGTAQDYMEYGSDVLEYSLAGANGGAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILRPRSASASAALQGTYTRQWMFKXXXXXXXXXXQGACTWQSSRHGPNAMAKRLDGAYALEAAAAVAAAGRSAQHEDEFERARALTSTRGVGGAARMREEGLGSASSXXXXXXXXXGVSDWSVFSAALFCLASETDEHGGGXXXXSASGRTEHTQEGHMLRMAGVGEGGRGSKSAGGSPPNKPPVVGXXXXXVTLEAYLDAIPPGLGGYTEAFKATERPSFAVAALGAAAPVDLRGDENEIDIEAMRLMGATDFVEIGIPKGPAVKIAYTLRENRPPPGGGSPLTARQFLTSLGLVKALGAQGRSAXXXXXXXXXXXXXTSLGLAKYAAAFEDALVDLPALAAMREQDLVDLGVVTVEAISSDXXXXXVVKGPRLKIMAELHRLFSDASARAAPHASWTPGIVPQPPPTRLYVPRPRSSNSDVSYTSVVSSVSSCGNASGGRLARSPGSRPRAVTGAQVSPY 1014
            MQKTGRTAAASDSSAKHAPEGSPSPPLARAAGGGSAVGKSGVSGGTGADADGSMTVTQHQQSSVIGPADAVTPPMGAANSAAAPPPIPGVTPLQMEPAHPQFAIYPPYISTGGGGVGEEQPTPTLSMHGGGPATFGDLIDTRFLDSPMPDTAGSGLIGFPVAPHAFSAERHDHHRPPQVFTQHFAPPPQPFPGAYANMWPEGVPLGMSPPPPHNYGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPPGGXXXXXXXXFMDGGLGGHHXXXXXXXXXXXXXXXPAIPTVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAADEQXXXXXXXXXXXXXXXXXXXANQHFPLQGTAQDYMEYGSDVLEYSLAGANGGAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILRPRSASASAALQGTYTRQWMFKXXXXXXXXXXQGACTWQSSRHGPNAMAKRLDGAYALEAAAAVAAAGRSAQHEDEFERARALTSTRGVGGAARMREEGLGSASSXXXXXXXXXGVSDWSVFSAALFCLASETDEHGGGXXXXSASGRTEHTQEGHMLRMAGVGEGGRGSKSAGGSPPNKPPVVGXXXXXVTLEAYLDAIPPGLGGYTEAFKATERPSFAVAALGAAAPVDLRGDENEIDIEAMRLMGATDFVEIGIPKGPAVKIAYTLRENRPPPGGGSPLTARQFLTSLGLVKALGAQGRSAXXXXXXXXXXXXXTSLGLAKYAAAFEDALVDLPALAAMREQDLVDLGVVTVEAISSDXXXXXVVKGPRLKIMAELHRLFSDASARAAPHASWTPGIVPQPPPTRLYVPRPRSSNSDVSYTSVVSSVSSCGNASGGRLARSPGSRPRAVTGAQVSPY
Sbjct:    1 MQKTGRTAAASDSSAKHAPEGSPSPPLARAAGGGSAVGKSGVSGGTGADADGSMTVTQHQQSSVIGPADAVTPPMGAANSAAAPPPIPGVTPLQMEPAHPQFAIYPPYISTGGGGVGEEQPTPTLSMHGGGPATFGDLIDTRFLDSPMPDTAGSGLIGFPVAPHAFSAERHDHHRPPQVFTQHFAPPPQPFPGAYANMWPEGVPLGMSPPPPHNYGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPPGGXXXXXXXXFMDGGLGGHHXXXXXXXXXXXXXXXPAIPTVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAADEQXXXXXXXXXXXXXXXXXXXANQHFPLQGTAQDYMEYGSDVLEYSLAGANGGAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILRPRSASASAALQGTYTRQWMFKXXXXXXXXXXQGACTWQSSRHGPNAMAKRLDGAYALEAAAAVAAAGRSAQHEDEFERARALTSTRGVGGAARMREEGLGSASSXXXXXXXXXGVSDWSVFSAALFCLASETDEHGGGXXXXSASGRTEHTQEGHMLRMAGVGEGGRGSKSAGGSPPNKPPVVGXXXXXVTLEAYLDAIPPGLGGYTEAFKATERPSFAVAALGAAAPVDLRGDENEIDIEAMRLMGATDFVEIGIPKGPAVKIAYTLRENRPPPGGGSPLTARQFLTSLGLVKALGAQGRSAXXXXXXXXXXXXXTSLGLAKYAAAFEDALVDLPALAAMREQDLVDLGVVTVEAISSDXXXXXVVKGPRLKIMAELHRLFSDASARAAPHASWTPGIVPQPPPTRLYVPRPRSSNSDVSYTSVVSSVSSCGNASGGRLARSPGSRPRAVTGAQVSPY 1014          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.530e-131
Identity = 325/790 (41.14%), Postives = 376/790 (47.59%), Query Frame = 0
Query:  286 PAIPTVLEKFPGFVRCVIDIAPE----------------------------------------VVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAP------------------------------VNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAADEQXXXXXXXXXXXXXXXXXXXANQH-FPLQGTAQDYMEYGSDVLEYSLAGANGGAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILRPRSASASAALQGTYTRQWMFKXXXXXXXXXXQGACTWQSSRHGPNAMAKRLD-------------GAYALEAAAAVAAAGRSAQHEDEFERARALTSTRGVGGAARMREEGLGSASSXXXXXXXXXGVSDWSVFSAALFCLASETDEHGGGXXXXSASGRTEHTQEGHMLRMAGVGEGGRGSKSAGGSPP------NKPPVVGXXXXXVTLEAYLDAIPPGLGGYTEAFKATERPSFAVAALGAAAPVDLRGDENEIDIEAMRLMGATDFVEIGIPKGPAVKIAYTLRENRPPPGGGSPLTARQFLTSLGLVKALGAQGRSAXXXXXXXXXXXXXTSLGLAKYAAAFEDALVDLPALAAMREQDLVDLGVVTVEAISSDXXXXXVVKGPRLKIMAELHRLFSDASARAAPHASWTPGIVPQPPPTRLYVPRPRSSNSDVSYTSVVSSVS 985
            PA+PTVLEKFPGFVRCV+DIAPE                                        VVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISK P                              VN++AAGV+DEVVSQM+DCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMM                   VIVSGI QSVRLAVAMIEDVF+FGKAADEQ                   A  H FPLQGTAQDYMEYGSD+L+Y L G  G A G                            +++ RPRS SASA    TY      +           GA   +    GP    +R +             GA+  +A+          Q      R +A   T G       R      A+           +      SA    +A+ T E                T EGHMLRMAGVG    G++  GG+ P       KP +       V +E YL+A+  GLG Y   FK                       ENEID+EAMRLMGA DFVEIGIPKGPA KIAY LRE R PPG   PL+ RQFL+++                             G++KY ++FE+A VD+ A+AAMREQD  +LGVV               KGPRLKIMAEL R+F +    +   AS    +   PP   L  P  R +N   + T   S+ S
Sbjct:  256 PAVPTVLEKFPGFVRCVVDIAPEGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMK------------------VIVSGIPQSVRLAVAMIEDVFTFGKAADEQHHHATTMA-----------AGHHTFPLQGTAQDYMEYGSDILDYGLVGGPGNAGG---------------------------GDDVFRPRSVSASAVSPFTYQS---VQHGAGRMGGSPYGASYERDVPLGPRE-GRRFEPGHAQGHDVRPAPGAFEPQASPQSMQPPAPQQPSSLQHRVQAGRPTSGXXXXXXARHPNP-LAAPWVPQVCTHRELLQMYECSATANAVANATGER---------------TIEGHMLRMAGVGT---GTRRGGGASPLALSDAAKPLLTAPPS--VCMEDYLEAVGSGLGHYASVFK-----------------------ENEIDLEAMRLMGARDFVEIGIPKGPAAKIAYALREGRAPPGATLPLSTRQFLSAM-----------------------------GMSKYQSSFEEAKVDIAAMAAMREQDFAELGVV---------------KGPRLKIMAELQRMFPEHRMGSVESASAAGSVQASPPHMGLAEPCSRGANGSDASTDSASAAS 897          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.970e-80
Identity = 249/656 (37.96%), Postives = 298/656 (45.43%), Query Frame = 0
Query:  287 AIPTVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAADEQXXXXXXXXXXXXXXXXXXXANQHFP--LQGTAQDYMEYGSDVLEYSLAGANGGAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILRPRSASASAALQGTYTRQWMFKXXXXXXXXXXQGACTWQSSRHGPNAMAKRLDGAYALEAAAAVAAAGRSAQHEDEFERARALTSTRGVGGAARMREEGLGSASSXXXXXXXXXGVSDWSVFSAA-LFC---LASETDEHGGGXXXXSASGRTEHTQEGHMLRMAGVGEGG----RGSKSAGGSPPNKPP------------VVGXXXXXVTLEAYLDAIPPGLGGYTEAFKATERPSFAVAALGAAAPVDLR---GD-----------ENEIDIEAMRLMGATDFVEIGIPKGPAVKIAYTLRENRPPPGGGSPLTARQFLTSLGLVKALGAQGRSAXXXXXXXXXXXXXTSLGLAKYAAAFEDALVDLPALAAMREQDLVDLGV 906
            A+PTVLE+FPGFVRCV+DIAPEVVGWVIGRSG+HIKEMKHRSGCGMWVDQKDLKLYITG DMPRIH AA +V DLISKAPVN+N+AGV+DEV S MI+CPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMM                   VIVSGI QSVRL VAMIEDV +FG++A+                         FP  + G A+ +M+ G   L+     + G                                +  + P  A                            G     SS   P ++    D    L A  A       A +++E  + +     RG   +             XXXXX      +D + F+   + C   L   +   GG      +SG T     G  L M      G    R   +AGG     PP            V G       L    D    G     +A +  ERP   V       P DL    GD           ENEID+EA++LM  +DF +IGIPKGP VK+ Y LR NR PP  G   T + FL SL                             GL +Y  AFE+A VD+ A+  M E D   LGV
Sbjct:   20 AVPTVLERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMK------------------VIVSGIPQSVRLGVAMIEDVITFGRSAEHGAGLGGAVPPNFLD----------FPAGVAGMAE-FMDDGGGGLDSFTVRSTG----------------------------PPGQQPFMNPGEA----------------------------GGVRMGSS---PLSIPGSGDPGSNLSAGGAGFPVVGGAPYDEELRKQQ----LRGSPASXXXXXXXXXXXXXXXXXXRPAKMEADVAGFNGKEMDCGGMLGHNSAASGGSRTGSISSGGTPPLV-GRSLSMGSWNVMGAPPIRVVDTAGGXXXXAPPLRLGNSPATGLSVAGALMNMNRLSINSDDSNGGGRSIGQASRQRERPGTPVGN-----PADLAEFLGDMGLGQYAQALTENEIDLEAVQLMADSDFQDIGIPKGPRVKLLYALRTNRYPPKSGDLSTMKTFLASL-----------------------------GLDRYCKAFEEAEVDMGAVDVMEESDYAQLGV 548          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 5.810e-50
Identity = 104/143 (72.73%), Postives = 115/143 (80.42%), Query Frame = 0
Query:  324 MKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAAD 466
            ++HRSGCGMWVDQKDLKLYITG DMPRIH AA +V DLISKAPVN+N+AGV+DEV S MI+CPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMM                   VIVSGI QSVRL VAMIEDV +FG++A+
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMK------------------VIVSGIPQSVRLGVAMIEDVITFGRSAE 183          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.810e-28
Identity = 63/127 (49.61%), Postives = 90/127 (70.87%), Query Frame = 0
Query:  292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418
            +++  GFVRC +DI  EVVGWVIG+SGS IK++K+++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +  V++ +DCPPHL+ +L  R  +TI RI +E+RA VV+N+KM
Sbjct:   44 IKRCQGFVRCDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIK---AGAVEAAVTRSLDCPPHLLDVLGDR--ATIARIVKETRAQVVVNKKM 165          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.100e-26
Identity = 71/179 (39.66%), Postives = 106/179 (59.22%), Query Frame = 0
Query:  286 PAIPTVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKA 464
            P  P  +++  GF+RC +DI  EVVGWVIGR+GS IK++K+++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +  V++ ++CPPHL+ +L  R  +TI RI +E+RA VV+N+KM                    VI+ G A +V +A   I+ + +   A
Sbjct:   53 PFSPYSIKRCQGFIRCDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIK---AGAVEAAVTRSLECPPHLLDMLGDR--ATIARIVKETRAQVVVNKKMAR------------------VIIRGNAHAVHMACGRIQTIIAAAAA 208          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.370e-24
Identity = 62/127 (48.82%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418
            +++  GFVRC +DI  EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+P +  AA  V   ++ AP+    AG  +  V++ I+CPP L+  L  R  +TI RI +E+ A VV+N+K+
Sbjct:   55 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTIECPPQLLDDLGDR--TTIARIVKETHAQVVVNKKI 176          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A6H5JEQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ9_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 5.200e-12
Identity = 34/39 (87.18%), Postives = 39/39 (100.00%), Query Frame = 0
Query:  287 AIPTVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMK 325
            A+PTVLE+FPGFVRCV+DIAPEVVGWVIGR+G+HIKEMK
Sbjct:  277 AVPTVLERFPGFVRCVMDIAPEVVGWVIGRNGAHIKEMK 315          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 7.610e-12
Identity = 60/199 (30.15%), Postives = 90/199 (45.23%), Query Frame = 0
Query:  290 TVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKD-----LKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGV-----------------DDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAAD 466
            T+ +K P     ++DI P VVGWVIG++G+ I +++ ++   MW+DQ        KL+I G    ++  A   V  L+  APVN    G                  D     + I CP  L+G LIG+ G+ IK IK  S ANV + Q                      V ++G A  V LA  ++++V + G A+D
Sbjct:  191 TIPDKVPD---AMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQ-QVEAAIDEVEFLMKSAPVNTPRPGKMGPKQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQ-------------GYPDGHPRDVFITGTADEVDLAATLVDEVIASGTASD 372          
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.190e-11
Identity = 60/199 (30.15%), Postives = 93/199 (46.73%), Query Frame = 0
Query:  290 TVLEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKD-----LKLYITGTDMPRIHIAAGMVADLISKAPVNM------------NAAGV-----DDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMXXXXXXXXXXXXXXXXXXXVIVSGIAQSVRLAVAMIEDVFSFGKAAD 466
            T+ +K P     ++DI P VVGWVIG++G+ I +++ ++   MW+DQ        KL+I G    ++  A   V  L+  APVN             +  G+     D     + I CP  L+G LIG+ G+ IK IK  S ANV + Q                      V ++G A+ V LA  ++++V + G A+D
Sbjct:  625 TIPDKVPD---AMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQ-QVEAAIAEVEFLMKSAPVNTPRPARMGPKQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQ-------------GYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASD 806          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351307 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRS0_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJQ9_9STRA1.530e-13141.14SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
D7FHT5_ECTSI1.970e-8037.96SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JET1_9PHAE5.810e-5072.73SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZGS8_9STRA3.810e-2849.61Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA1.100e-2639.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FQB1_ECTSI1.370e-2448.82SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JEQ9_9PHAE5.200e-1287.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI19_ECTSI7.610e-1230.15Circadian RNA-binding protein CHLAMY 1 subunit C1 ... [more]
A0A6H5KMM6_9PHAE1.190e-1130.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 297..363
e-value: 1.2E-4
score: 31.4
coord: 377..460
e-value: 1.3E-10
score: 51.2
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 383..457
e-value: 2.4E-9
score: 36.9
coord: 302..359
e-value: 2.1E-6
score: 27.5
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 866..944
e-value: 1.5E-8
score: 36.3
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 862..909
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 371..461
e-value: 3.5E-12
score: 47.8
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 299..365
e-value: 8.7E-7
score: 30.6
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 302..370
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 375..459
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 867..907
e-value: 4.4E-6
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 991..1014
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..737
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 299..414
coord: 352..519
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 378..455
score: 12.348994
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 298..358
score: 10.713865
NoneNo IPR availableCDDcd00105KH-Icoord: 383..456
e-value: 1.20551E-11
score: 58.7255
NoneNo IPR availableCDDcd00105KH-Icoord: 303..346
e-value: 2.73825E-5
score: 41.0063
NoneNo IPR availableCDDcd09487SAM_superfamilycoord: 867..935
e-value: 5.56394E-9
score: 51.0861

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_86contigContig_86:606729..620297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351307mRNA_13715Tribonema minus UTEX_B_3156 mRNAContig_86 606729..620297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351307|estExt_Genemark1.C_Ctg_860062 ID=Trimin1|351307|estExt_Genemark1.C_Ctg_860062|Name=jgi.p|Trimin1|351307|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1015bp
MQKTGRTAAASDSSAKHAPEGSPSPPLARAAGGGSAVGKSGVSGGTGADA
DGSMTVTQHQQSSVIGPADAVTPPMGAANSAAAPPPIPGVTPLQMEPAHP
QFAIYPPYISTGGGGVGEEQPTPTLSMHGGGPATFGDLIDTRFLDSPMPD
TAGSGLIGFPVAPHAFSAERHDHHRPPQVFTQHFAPPPQPFPGAYANMWP
EGVPLGMSPPPPHNYGPPPPPGYAWPMPPPAHHPPHMPPPRMGGPHLGPP
GGPLLGPPGGFMDGGLGGHHHHHLHHPHHPPPHHPPAIPTVLEKFPGFVR
CVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPR
IHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGST
IKRIKEESRANVVINQKMMKRIREESRANVVINQKMMKVIVSGIAQSVRL
AVAMIEDVFSFGKAADEQHHHAATAAAAAAATSTAAAANQHFPLQGTAQD
YMEYGSDVLEYSLAGANGGAAGPASGGSGASSTVTGGSNAAAVAAAAAAA
EEILRPRSASASAALQGTYTRQWMFKSAALQGAYTRQGACTWQSSRHGPN
AMAKRLDGAYALEAAAAVAAAGRSAQHEDEFERARALTSTRGVGGAARMR
EEGLGSASSAGSGGAGSGGVSDWSVFSAALFCLASETDEHGGGGSGGSAS
GRTEHTQEGHMLRMAGVGEGGRGSKSAGGSPPNKPPVVGPIVKPVTLEAY
LDAIPPGLGGYTEAFKATERPSFAVAALGAAAPVDLRGDENEIDIEAMRL
MGATDFVEIGIPKGPAVKIAYTLRENRPPPGGGSPLTARQFLTSLGLVKA
LGAQGRSAHQFLTPLGLVKFLTSLGLAKYAAAFEDALVDLPALAAMREQD
LVDLGVVTVEAISSDLVDLGVVKGPRLKIMAELHRLFSDASARAAPHASW
TPGIVPQPPPTRLYVPRPRSSNSDVSYTSVVSSVSSCGNASGGRLARSPG
SRPRAVTGAQVSPY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR013761SAM/pointed_sf
IPR036612KH_dom_type_1_sf
IPR001660SAM