Trimin1|351243|estExt_Genemark1.C_Ctg_840033 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351243
Unique NameTrimin1|351243|estExt_Genemark1.C_Ctg_840033
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length950
Homology
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A836C8H5_9STRA (DRBM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA)

HSP 1 Score: 1622 bits (4199), Expect = 0.000e+0
Identity = 949/949 (100.00%), Postives = 949/949 (100.00%), Query Frame = 0
Query:    1 MGCGAATATLACLMALQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMMSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEGRQEVKWTVIQHASQPLPRGCTPLNLPPPIPPLDRFLKVSPDTVKCVTMPATSSPPGRSWAGSNWAGAADPAAGAIPLLSVKFKKPFRMAPPARALKPPLRPR 949
            MGCGAATATLACLMALQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMMSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEGRQEVKWTVIQHASQPLPRGCTPLNLPPPIPPLDRFLKVSPDTVKCVTMPATSSPPGRSWAGSNWAGAADPAAGAIPLLSVKFKKPFRMAPPARALKPPLRPR
Sbjct:    1 MGCGAATATLACLMALQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMMSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEGRQEVKWTVIQHASQPLPRGCTPLNLPPPIPPLDRFLKVSPDTVKCVTMPATSSPPGRSWAGSNWAGAADPAAGAIPLLSVKFKKPFRMAPPARALKPPLRPR 949          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 8.250e-85
Identity = 267/917 (29.12%), Postives = 375/917 (40.89%), Query Frame = 0
Query:   13 LMALQLC------EAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDA-RRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAM--MSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEG-RQEVKWTVIQHASQPLPRGCTPLNLPPP---IPPLDRFLKVSP---DTVKCVTMPATSSPPGRSWAGSN 910
            L+ L LC      EAGI GF KWF   F  +V      + + FDHVC DMNQILHVA+R++ +E+ AI R F +++  LK   PR+SVVFAFDGSAPLAKLL QR+RRE  +R  +Y+MSAL+++PGT FM   A AM YYA+                                                                                                                                  RP Y+G                           V +Y+  A+V GEGELK +DW       P+                                    +ES VIVGGDADL+LQGLALS+VKN F+ +     S R+ S+W+V R LEAMFPG+S  +R DL  L++LNGNDYLPKVRGVSF RCF+ Y A K     + +F+ID +++   W FL   L           +G          +  +    G   K  ++ G+                 +D+  E    +G + ++     V G   T    H  +K      AA  +L+EL P+LY+++L   ++  A++L  AQ                      D    D+D N DE S          R       DV+++L GVLWN+ MY DG+ P+ YWRY  RY+PSC D+  WV  ++A E          L ++A PV   P LP+ +ACL M  M+  G+  +P+RL+ L+   SP+                   ++G+       DI  +L    +  P+ L+ F +G      W V+        R  TP   PPP    PPLD     +      ++  +M ATS+P    W+ ++
Sbjct:    6 LVQLLLCQAIICAEAGINGFHKWFVQEFPTAV--TDASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQE------------------------------------------------------------------------------------------------------------------------------CTRPCYQG---------------------------VKFYISGANVPGEGELKCIDWLK---HMPKP-----------------------------------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKH-RDNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIE--------VHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFL---EQEKARILEQAQ---------------------LDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWV--KLASEDK--------LANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALE----------WRGVSSGL-------DIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSA--RQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSAS 667          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: I2CR78_NANGC (5'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC)

HSP 1 Score: 193 bits (490), Expect = 1.660e-49
Identity = 173/610 (28.36%), Postives = 249/610 (40.82%), Query Frame = 0
Query:   16 LQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGA-----AMALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPELYEDYLVA 620
            L   E GI GF KWF+G + + V  V   Q  +FDHV  D+NQ+ H+A R++ +E+ AI R   E+ + L+ L  ++SVV AFDG APLAK++TQR RR   + A+   +++L+++PGT FMR AAEA+  + +TRL                                           D+TP                                                                                                                + YY+  ++  GEGE+K++DW             + T         XXXXXXXXXXXXX        ES+V+VGGDADLVLQGLAL  + +  V+  ++KRSG  VSL Q   +LE  FPG+S  +R D++ LLV+ GNDYL KVRG++F      Y   K  P  +  F++ +E + FNWPFL  F       +     ++ L+GPTPA  +N  +QKK +                                   E E  G +  +  ++ +     T+     + K A++A   LVL+E+ PE Y  Y  A
Sbjct:   59 LPFVEGGIYGFWKWFRGHYKEVVSKVSSEQYAEFDHVLIDVNQLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEKDAK-TPLNSLHLSPGTSFMRRAAEAVIDFCHTRL-----------------------------------------ESDLTPRRR-------------------------------------------------------------------------------------------------------------IRYYVSCSESPGEGEVKLMDW-------------INTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYFVSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEFKDQFMLLAENKTFNWPFLQAFYDDLAARSFVDDLSVLLRGPTPAGVLNELMQKKKVP--------------------------------PFEMEFEGQASAWTATLTLEEKRFTLSEPQPTMKAAKQAICELVLKEVVPEAYATYFPA 472          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 166 bits (421), Expect = 2.680e-39
Identity = 131/457 (28.67%), Postives = 179/457 (39.17%), Query Frame = 0
Query:   50 DHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNI-----TPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGG-QGSFIIDSERQRFNWPFLLRFLK 500
            DHVCFD+NQ++H+A+R+S NEE+ + R F  I   LK   P+RSV FAFDG  P+AKLLTQR RR     ++R  ++  +I     TPGT+ M    +A+ Y+A +RL G                                                                        K+   DKV + +  P                                                                              DV GEGE+KI DW +       S  A R A                             ESV+++GGDAD+VLQGLA +  ++LFVYA   +  G ++S+  + + LE  FPGES  +R D I L ++NGNDYLPKVRGV F   +  Y A K      QG +++DS R+ FNWPFL+  L+
Sbjct:   23 DHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFACSRLEGDM----------------------------------------------------------------------KY---DKVDMRISGP------------------------------------------------------------------------------DVPGEGEVKIFDWLN-------SFVARREAGTQVSSIVT--------------------ESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQFQGQYLLDSTRRTFNWPFLVALLE 301          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 156 bits (394), Expect = 3.420e-39
Identity = 126/434 (29.03%), Postives = 165/434 (38.02%), Query Frame = 0
Query:   56 MNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYA--------SELKRSGR-----IVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPG 476
            MN +LH A R++ + E AI R + E+   L+TL P +SVV AFDG  PLAKLLTQR RR    +A +Y++S L+ITPGT FM++  EA  YYA  RL                                                                                                                        V SA                                   V +Y+  ADV GEGE+KI++W H                                      + +  +E ++IVGGDADLVLQGLA+ +VK+LFVYA        S  K  G+     ++S+W+V R LE +FPG+S  +R DLI L+++NGNDYLPKVRG SF   FR Y   KA  G
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRL------------------------------------------------------------------------------------------------------------------------VASAKFKN-------------------------------VAFYISGADVAGEGEIKIIEWIH------------------------------------NLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVKAMIG 247          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 162 bits (410), Expect = 9.860e-38
Identity = 138/504 (27.38%), Postives = 185/504 (36.71%), Query Frame = 0
Query:   22 GIQGFSKWFKGVFHDSVMAVQPGQR--DQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERY-------------------QMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVY-----ASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGG------QGSFIIDSERQRFNWP 493
            GI GF KW  G F D ++ VQ G R  + +DHV FD+NQILH AVR++ N +   A  F E+ Q+LK   PR+SV FAFDG APLAKL TQR RR   R A  Y                    +  L +TPG + +    +++ Y+AY+RL                                                                                                                               R YR                            V   +  ADV GEGELK++D+              RTA                             +SVV+VGGDAD+VLQGLA   V+N FVY      S  +R   ++S+W++TR  E +FP ES  +R D + L +LNGNDY+PKVRG+S  R +  Y   K    G      +G  ++D+E++  NWP
Sbjct:    2 GIIGFQKWLLGNFPD-IVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQND----------------------------------------------------------------------------------------------------------------------------RKYRN---------------------------VEIRISGADVPGEGELKLIDFC-------------RTAQIPST------------------------DSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWP 316          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A7S0E673_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP)

HSP 1 Score: 110 bits (276), Expect = 3.790e-24
Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 0
Query:   47 DQFDHVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRL 152
            ++F+HV FDMN +LH A RR+ + E AI + + E+   L+TL P +SVV AFDG  PLAKLLTQR RR    ++ +Y++S L+ITPGT FM +  +A  YYA  RL
Sbjct:    2 EEFEHVLFDMNGLLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRL 107          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A7S0E9R5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E9R5_9CRYP)

HSP 1 Score: 110 bits (275), Expect = 7.300e-22
Identity = 104/416 (25.00%), Postives = 168/416 (40.38%), Query Frame = 0
Query:  416 IVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSE----------------EPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKD-----ARRAAATLVLQELAPELYEDYLVARQRHDAQLLAA---AQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYE-------------------PEWDRAPGKGGHDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAMMSAEGRDLVPRRLRALL 788
            ++S+W+V R LE +FPG+S  +R DLI L+++NGNDYLPKVRG SF   FR Y   K+    +  F++D  ++ F+W F+  F+          +   TP    +  V   V    R+  +                   VT     +                EPE +  + +   +  V      +  ++A  ++      R A+     Q   P + +   ++ +  +A+L+ +   A                     L DD X       DE+   +EYE                     +D+   K   ++  Y  G+LWNI MY DG+ PD ++ Y  R+AP    +  W+E           E   P  +++ PVS  PAL    ACLAMM +   + VP+  +AL+
Sbjct:   17 VLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVKSMVDFKDRFLLDGAQRMFDWKFVHAFMSLVQKDVP-PIPAFTPIDVSDRMVDTDVNILQRQDYVSELAMYYQRRYRQSSAELNVTSTQLEDMNWQCTILWEGKEYVGEPERSIKAAKQNAAKEVLVAYGIISEDNAQDENIINGNVRNASPAPQQQNEVPPM-DQMAMSEEEGEAELVESYEKALNESESDEGDADEDDNLAGSSLPDDEXXXXXEGWDEN---FEYENVKIDYEDMLHAKEMPMDNSAFDKV-SKLPFNIPDYFEGLLWNIQMYIDGYVPDYFYTYNFRFAPDAKSIVKWIES----------EDFGPFPELSIPVSDCPALQPLHACLAMMPSTSPEHVPKAYQALI 416          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: A0A1D3D544_9EIME (XRN_N domain-containing protein n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A1D3D544_9EIME)

HSP 1 Score: 107 bits (266), Expect = 8.730e-20
Identity = 93/314 (29.62%), Postives = 137/314 (43.63%), Query Frame = 0
Query:  323 GEGELKILDWAHL---AGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGR----IVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFL----KFATMGAA-------MALQGPTPAQWVNAAVQKKVIRG--GRKKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEE---PEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRAAATLVLQELAPEL 613
            GEGELK+ DW +    AGR     A+  +                        +     +S+V++GGDADLV+Q LAL    NLFVY  +   S +    I SL  +  +LE +FPG S   RND   L +LNGNDYLPK+ G SF R    Y A +  P       +D+  + F+W F   FL    K  ++  A       + L G  PA+ V  A   +++     +K+L+ G +                T D+   E   P  +G   +     +   T ++V +    +K A++ AA  +LQ   PEL
Sbjct:  262 GEGELKLADWINFSCDAGRSQTQEASSESQGASERRSGRSAYSRGRPCPGLGLLKVKPTDSIVVIGGDADLVVQSLALPFASNLFVYNPQSIASSKTKRVIYSLRSLLGELERLFPGRSHLARNDFALLCILNGNDYLPKIPGFSFARFAAAYEATRRRPECADGAWVDANSRSFDWGFFKVFLEELNKIHSLETAARQREETLRLNGSKPARGVFKASPLQIVHQLFAQKRLV-GAEAKDKLPWHFQEEANVFTCDLTFPEVFLPSVSGSLQQGAPEASPEKTCVSVASSAGDKKTAQQRAALKLLQLYYPEL 574          
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Match: U6KU91_EIMTE (Uncharacterized protein n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KU91_EIMTE)

HSP 1 Score: 106 bits (265), Expect = 1.010e-19
Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 0
Query:  379 ESVVIVGGDADLVLQGLALSKVKNLFVY----ASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLK 500
            +S+VI+GGDADLV+Q LAL    NLFVY     +  K    I SL  +  +LE +FPG S  +RND   + +LNGNDYLPK+ G SF R    Y A +  P  + S  +D+E++ FNWPF   F++
Sbjct:   28 DSIVIIGGDADLVVQCLALPYTSNLFVYNPQNITHSKNIRVIYSLRALLGELERLFPGNSHLVRNDFALMCILNGNDYLPKLPGFSFARFSAAYEATRRRPEYRDSSWVDAEQRSFNWPFFSAFIE 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351243 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8H5_9STRA0.000e+0100.00DRBM domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5KZW9_9PHAE8.250e-8529.12XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
I2CR78_NANGC1.660e-4928.365'-3' exoribonuclease 1 (Fragment) n=1 Tax=Nannoch... [more]
A0A7S1TFG2_9RHOD2.680e-3928.67Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
L1JQ07_GUITC3.420e-3929.03Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A2V3J5K0_9FLOR9.860e-3827.385'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A7S0E673_9CRYP3.790e-2450.94Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S0E9R5_9CRYP7.300e-2225.00Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A1D3D544_9EIME8.730e-2029.62XRN_N domain-containing protein n=1 Tax=Cyclospora... [more]
U6KU91_EIMTE1.010e-1945.24Uncharacterized protein n=1 Tax=Eimeria tenella Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.20coord: 540..616
e-value: 9.9E-6
score: 27.5
NoneNo IPR availableGENE3D3.40.50.12390coord: 21..126
e-value: 5.9E-16
score: 60.7
coord: 340..433
e-value: 7.3E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 644..682
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 797..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 798..816
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..675
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 551..611
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 351..399
e-value: 1.5E-6
score: 27.8
coord: 22..150
e-value: 3.6E-16
score: 59.3
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 22..151
coord: 351..795
coord: 195..333
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 557..611
score: 10.363144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:241385..257684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351243mRNA_12112Tribonema minus UTEX_B_3156 mRNAContig_84 241385..258174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351243|estExt_Genemark1.C_Ctg_840033 ID=Trimin1|351243|estExt_Genemark1.C_Ctg_840033|Name=jgi.p|Trimin1|351243|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=950bp
MGCGAATATLACLMALQLCEAGIQGFSKWFKGVFHDSVMAVQPGQRDQFD
HVCFDMNQILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDG
SAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYT
RLPGGTARLPGGTYNHTLGTDFMRSAAEAMRYHGYMRLAGVCVHDDITPG
TDFMRRAAEAMRYYAYTRLPDGTQASKFGPGDKVWLDLGEPGAPQWTGPW
AIQGRKGADDLVLTHHKGGARKVVSAALVRPYRGDPPPGPRGTREGVRGD
PPPGHRGTRKGVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAY
YVSGADVPGEGELKILDWAHLAVAHGGEESVVIVGGDADLVLQGLALSKV
KNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGN
DYLPKVRGVSFGRCFRHYCAAKAAPGGQGSFIIDSERQRFNWPFLLRFLK
FATMGAAMALQGPTPAQWVNAAVQKKVIRGGRKKLIRGGQWVNAAVQKKR
IRGGRVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDARRA
AATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRAAQERRAAANQLSD
ATDLADDDDLDLDLNGDESSDEYEYEPEWDRAPGKGGHDVKAYLTGVLWN
IHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLT
DVASPVSRKPALPSDVACLAMMSAEGRDLVPRRLRALLDADSPVGNMFAP
PASSSSAQSSSQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAEGRQE
VKWTVIQHASQPLPRGCTPLNLPPPIPPLDRFLKVSPDTVKCVTMPATSS
PPGRSWAGSNWAGAADPAAGAIPLLSVKFKKPFRMAPPARALKPPLRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0270735_3_exoribonuclease
IPR014720dsRBD_dom