Trimin1|351238|estExt_Genemark1.C_Ctg_840022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351238
Unique NameTrimin1|351238|estExt_Genemark1.C_Ctg_840022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1029
Homology
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A835YIM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM8_9STRA)

HSP 1 Score: 1548 bits (4009), Expect = 0.000e+0
Identity = 1028/1028 (100.00%), Postives = 1028/1028 (100.00%), Query Frame = 0
Query:    1 MVTVQLADLVAAPVTAPGTCVLTAMGPGVLVKYREADDMHCVRLWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYRRSPPVPNFAVDVGFGTAFVTPADVSCPVAAVMPLIELVADGSAALMRARTRAARRSGAARSLLDGLAALEPLAGRARAALSSXXXXXXXXXXXXXXXXQEASLVDALVSAASGDGGAVAGLQALLRARRAEFDALLAAARAEVAGERARARVDALLAATSAPEFGGAVTTALSSLGEGLMELRRLATDASGXXXXXXXXAAMVAEAKXXXARAAQVQAELEGTRAAAVLKEGGAALGAELEATLFLDAADPDXXXXXXXXXXXXXVVKARANSARLVQSLTAEDSPALRKAKELAEKARARLERPAGWKDAVIGKAREAEVEGRGRVGDVIRAAAREGERARQAIMMLRGEATAATASDNVLRFMEKLVLGWIDTAAADAAALADATAVTQTETALTQNGALRAPPLPPLCAADLVERYEAGVLPAELGAWGGGTGDGMVGRVRRVLEGYGSGAMGLDDAVSQAVEYLNSAEGEAAAASLVNSGGRHLAGLRSTGHSAAVRGLLTRLGDPALEGRIKASVEGIDADRWLDMGERALTDEAARAALLTRIKXXXXXXXXXXXXXXXXXDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDVELALPTKDVLDALSAAAEPHPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGPQPSTFTTSDPATARTAGDPTVPMSAERKTTAGSAGGVXXXXXXXXXXXXXXXAAAPQQVLAAAXXXXXXXXXXXXARXXSIAGAAQAEQPAEAAGRRDSLGRRRLRRKSADTPPAPEVFAVVARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLGGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRTGTGFTSAYTIAS 1028
            MVTVQLADLVAAPVTAPGTCVLTAMGPGVLVKYREADDMHCVRLWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYRRSPPVPNFAVDVGFGTAFVTPADVSCPVAAVMPLIELVADGSAALMRARTRAARRSGAARSLLDGLAALEPLAGRARAALSSXXXXXXXXXXXXXXXXQEASLVDALVSAASGDGGAVAGLQALLRARRAEFDALLAAARAEVAGERARARVDALLAATSAPEFGGAVTTALSSLGEGLMELRRLATDASGXXXXXXXXAAMVAEAKXXXARAAQVQAELEGTRAAAVLKEGGAALGAELEATLFLDAADPDXXXXXXXXXXXXXVVKARANSARLVQSLTAEDSPALRKAKELAEKARARLERPAGWKDAVIGKAREAEVEGRGRVGDVIRAAAREGERARQAIMMLRGEATAATASDNVLRFMEKLVLGWIDTAAADAAALADATAVTQTETALTQNGALRAPPLPPLCAADLVERYEAGVLPAELGAWGGGTGDGMVGRVRRVLEGYGSGAMGLDDAVSQAVEYLNSAEGEAAAASLVNSGGRHLAGLRSTGHSAAVRGLLTRLGDPALEGRIKASVEGIDADRWLDMGERALTDEAARAALLTRIKXXXXXXXXXXXXXXXXXDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDVELALPTKDVLDALSAAAEPHPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGPQPSTFTTSDPATARTAGDPTVPMSAERKTTAGSAGGVXXXXXXXXXXXXXXXAAAPQQVLAAAXXXXXXXXXXXXARXXSIAGAAQAEQPAEAAGRRDSLGRRRLRRKSADTPPAPEVFAVVARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLGGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRTGTGFTSAYTIAS
Sbjct:    1 MVTVQLADLVAAPVTAPGTCVLTAMGPGVLVKYREADDMHCVRLWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYRRSPPVPNFAVDVGFGTAFVTPADVSCPVAAVMPLIELVADGSAALMRARTRAARRSGAARSLLDGLAALEPLAGRARAALSSXXXXXXXXXXXXXXXXQEASLVDALVSAASGDGGAVAGLQALLRARRAEFDALLAAARAEVAGERARARVDALLAATSAPEFGGAVTTALSSLGEGLMELRRLATDASGXXXXXXXXAAMVAEAKXXXARAAQVQAELEGTRAAAVLKEGGAALGAELEATLFLDAADPDXXXXXXXXXXXXXVVKARANSARLVQSLTAEDSPALRKAKELAEKARARLERPAGWKDAVIGKAREAEVEGRGRVGDVIRAAAREGERARQAIMMLRGEATAATASDNVLRFMEKLVLGWIDTAAADAAALADATAVTQTETALTQNGALRAPPLPPLCAADLVERYEAGVLPAELGAWGGGTGDGMVGRVRRVLEGYGSGAMGLDDAVSQAVEYLNSAEGEAAAASLVNSGGRHLAGLRSTGHSAAVRGLLTRLGDPALEGRIKASVEGIDADRWLDMGERALTDEAARAALLTRIKXXXXXXXXXXXXXXXXXDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDVELALPTKDVLDALSAAAEPHPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGPQPSTFTTSDPATARTAGDPTVPMSAERKTTAGSAGGVXXXXXXXXXXXXXXXAAAPQQVLAAAXXXXXXXXXXXXARXXSIAGAAQAEQPAEAAGRRDSLGRRRLRRKSADTPPAPEVFAVVARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLGGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRTGTGFTSAYTIAS 1028          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: D8LTI7_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI7_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 1.260e-77
Identity = 350/1133 (30.89%), Postives = 503/1133 (44.40%), Query Frame = 0
Query:   18 GTCVLTAMGPGVLVKYREADDMHCVRLWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYRRS--------PPVPNFAVDVGFGT----AFVTPADVSCPVAAVMPLIELVADGSAALMRARTRAARRSGAARSLLDGLAALEPLAGR--ARAALSSXXXXXXXXXXXXXXXXQEASLV----DALVSAASGDGG-----------------AVAGLQALLRARRAEFDALLAAARAEVAGERARARVDALLAATSAPEFG---GAVTTALSSL----GEGLMELRRLATDASGXXXXXXXXAAMVAEAKXXX-----------------ARAAQVQAELEGTRAAAVLKEGGAALGAELEATLFLDAADPDXXXXXXXXXXXXXVVKARANSARLVQSLTAEDSPALRKAKELAEKARARLERPA---GWKDAVIGKAREAEV-EGRGRVGDVIRAAAREGERA---RQAIMMLRGEATAATASDNVLRFMEKLVLGWIDT------------------AAA---DAAALA-----DATAVTQTETALTQNGALRAPPLPPL------------------CAADLVERYEAGVLPAEL-------------------GAWGGGTGDGMVGRVRRVLEGYGSGAMGLDDAVSQAVEYLNSAEGEAAAASLVNSGGRHLAGLRSTGHSAAVRGLLTRLGDPALEGRIKASVEGIDADRWLDMGERALTDEAARAALLTRIKXXXXXXXXXXXXXXXXXDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDVELALPTKDVLDALSAAAEPHPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGPQPSTFTTSDPATARTAGDPTVPMSAERKTTAGSA--GGVXXXXXXXXXXXXXXXAAAPQQVLAAAXXXXXXXXXXXXARXXSIAGAAQAEQPAEAAGRRDSLGRRRLRRKSADTPPAPEVFAVVARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLG---GVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRT 1016
            GTCV T +G GVLV+ R+ DD+H VRLWR RG GSA AYL+  ++L  LPA+ G+   TP G G V+ +                F V +GF      A +    +SCPVA VMPL+E V DGS AL+ A T++A  +GA     D LA +E       A+A L +                   ++     +  V   +G GG                 A A L  L RA  A  ++L+ + R  + G    A  D   + TS    G   G V  A + L     EG  +L  LA             +A+   +K                    A+A ++Q ++EGT+   VL +G   L   L   +     D               V  A     RL+++L  ++SP + K  +L + A+ R+       GW++ + G    + V +G+GR+ +++RAAA  G      +  + +L+G+ T+  A+D  +R +E  +L +++                   AAA   DA+ LA     DA+ V +  +  +   A                           CA DLV+ +E+G L  EL                          G   +  ++++L GY  G  GLD+A++ A+++LNS EG++ A  LV+ G R L  L++     AV  +L +L DP LE RI   +EG+D D  L+  E+A++D  AR       K                 D+TV FLLEYLP +EVPPISG+S S V Y I NLDLSGF+LR EDV++ L   D+   L  A +   S           XXXXXXXXXXXXXX                                          A++R      V +  +R+  A +A  GG                   P+++  +             A   +  G   +  P     R D               PA EV  VVARGV+A+F+ +QWA +QETFPY  G GTADA VV+G V +GFS+KRG +    G+EGPLLV+S+RT+T++ L ++VAN R+AWL+NLL  LFS TI  YVCRSL++ +D +AS LL T
Sbjct:    6 GTCVETTLGTGVLVEIRQEDDVHVVRLWRSRGAGSAKAYLHPGAVLRELPAAVGVRVKTPEGDGVVVGFMSRGRXXXXXXXXADVFLVQMGFSADGEMALIEGDSISCPVAKVMPLVERVLDGSNALVTAETKSAIGTGAR----DILAKIEGTVYGVDAKATLGAAADTLDGGGKASRATAPATAVAGEHHEEGVEPGAGTGGHAEDDXXXXXXXXSARDAEAQLAELTRAETARMESLVESGRQRLEGLIDAALSDGSGSGTSGNHGGDAEGGVGRAGAELMRLWEEGKEQLSELAGKGGEALELDKHFSALKTLSKESPELAKIVSDLENGLETGAAKARELQRQVEGTKTVGVLMDGKTRLATGLGEVVDSYRGDES-------------VAMATERGGRLLKALAEKESPVMTKGMKLLKGAQERVIAQGQGDGWRNMLAGLQSSSMVLDGQGRLAEMLRAAADTGAGGGTIQDVLGLLKGDPTSR-ATDASVRLLENSMLAFMEAVPPPCPRPGTASEQNGGGAAATEGDASTLAEGEDRDASLVEKNASISSVEEAXXXXXXXXXXXXXXXXXXXXXXEGGRWCAQDLVDLFESGELAEELMRGLAQQASSQALTVMERLSETHLAQGSRGMESLKKLLRGYQQGETGLDEAMTCALDFLNSEEGQSLAGGLVSQGERGLESLKTMSKDGAVGKVLGQLADPGLERRILEGIEGLDTDELLETAEKAISDVDARTXXXXXXK-----------------DSTVDFLLEYLPHIEVPPISGTS-SRVGYAITNLDLSGFRLRKEDVDVQLV--DLSGGLEVAVKEGGSSNNGRDAISDGXXXXXXXXXXXXXXMAAVPWGAAVKE------------------------------ASSRPGDGSFVSLPEQRRQAAYAAVLGGAGSPRL-------------PEELQVSWGHHGEGKGFDDGAEAFAEDGGVVSASPPVPPPREDMA-------------PA-EVLRVVARGVRAEFKTLQWACRQETFPYTYGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLGLTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDGHASALLGT 1043          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S2GSF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GSF8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.890e-12
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 0
Query:   13 PVTAPGTCVLTAMGPGVLVKYREADDMHCVRLWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYRRSPP 91
            P+  PGT VLT  G GV++ YR  DD+H VRLW PRG GSA A+L R++I+  + A+ G    T +G+G V ++R + P
Sbjct:   20 PLGPPGTPVLTYYGTGVILSYRAEDDVHHVRLWAPRGGGSAAAFLTRSAIIRTIAAAVGFIVKTTMGRGRVTAFRPASP 98          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A6U4CVW6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CVW6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.470e-10
Identity = 40/136 (29.41%), Postives = 80/136 (58.82%), Query Frame = 0
Query:  896 EVFAVVARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLGGVEG-------PLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRTGTGFTSAY 1024
            E+F +VA  + A+  G++W+ +Q  FP+ +G G+ADA+V+N  VR+GF L +  L   E        P++++SS  + ME + + + +   +WL N L+++F   +++Y+C +++  L ++ + +      F SA+
Sbjct:  937 ELFTIVAVHLGARLPGLKWSFRQNYFPFLNGAGSADAVVLNAQVRLGFKLYKYRLAAGEQQADGEWLPIMLLSSAAVDMEDMDIMIQDDTFSWLYNALLNIFRSEVRDYLCTAVELELRESLATVAAYMHKFLSAH 1072          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S2UG56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG56_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.200e-9
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   18 GTCVLTAMGPGVLVKYREADDMHCVR-LWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYR 87
            G+CV T+ G G+LV +R  DD H +R LW+PRG+GSA+AY+NR +I   + A+ G +  T LGKG V +Y+
Sbjct:  385 GSCVATSYGIGILVAWRVEDDCHVIRSLWKPRGSGSAIAYMNRDAIHDVVEAAVGFDVETKLGKGVVSAYK 455          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S2A1I7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A1I7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 9.950e-9
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   18 GTCVLTAMGPGVLVKYREADDMHCVR-LWRPRGTGSALAYLNRASILAPLPASPGLEAITPLGKGTVLSY 86
            G+CV T+ G GVLV +R  DD H VR LW+ RGTGSALAYLNR++I   + A  G    T LG G V++Y
Sbjct:   61 GSCVATSFGIGVLVGWRFQDDCHVVRSLWQKRGTGSALAYLNRSAIHCIMEAPVGFHVETSLGYGFVVAY 130          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S1A4I1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A4I1_NOCSC)

HSP 1 Score: 64.7 bits (156), Expect = 9.310e-7
Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 0
Query:  892 PPAPEVFAVVARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLGGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLD 1007
            P   E+  + A  + A FRG++ +  Q  +P     G ADA+    SV I F L   ++  +  P L MSSR++ ME L +++A++  A ++N L  +F+E +K YVC  + D LD
Sbjct:  780 PGHGELLRLDAWEISAHFRGMKVSVDQVAWPNLHADGVADALAQRMSVSIAFHLHTDSVSKI--PRLYMSSRSVAMEELDITIADSSFAPIVNALTYIFAEQLKVYVCEKIADRLD 893          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S2E3J4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E3J4_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.950e-5
Identity = 34/121 (28.10%), Postives = 64/121 (52.89%), Query Frame = 0
Query:  591 LTRLGDPALEGRIKASVEGIDADRWLDMGERALTDEAARAALLTRIKXXXXXXXXXXXXXXXXXDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDVELALPTKDVLD 711
            L+ L    +E +  +++E ++ ++ L+  E A++   AR  L+  +K                 DA + FLL+YLPT+ + PI G     + Y+++NLD+ GF+++ EDV++ L     +D
Sbjct:  254 LSSLTSAEMEQKFMSNIETLNPEKLLEDAELAMSSNEARQKLVDSLK-----------------DAGLDFLLQYLPTMNIAPIEGEM-DMLEYSVSNLDMGGFKIKKEDVQIELGDLSKID 356          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S4DDP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDP5_HETAK)

HSP 1 Score: 54.7 bits (130), Expect = 4.180e-5
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  948 GTLGGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRTGTGFTSA 1023
            G  G  E PL+ +S R + +E + + V  ++ AW++NLL+ LF +T++ YV  +L+D L   ++ LLR   G   A
Sbjct:    8 GAAGAAEQPLMFLSRREVELEDIELKVDGSQAAWIINLLLGLFEDTVRSYVAGALRDLLATYSNVLLRRLNGLVGA 83          
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Match: A0A7S2RTN5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTN5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.240e-5
Identity = 32/98 (32.65%), Postives = 49/98 (50.00%), Query Frame = 0
Query:  607 VEGIDADRWLDMGERALTDEAARAALLTRIKXXXXXXXXXXXXXXXXXDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDVELAL 704
            V  +D D  +  GER + DE AR  ++  +K                 D  + FL+ YLP +E+PPI G     V Y + NLD+ GF+L  E+V++ +
Sbjct:  311 VNTLDTDTVISWGERMVKDEKARGEMVGNVK-----------------DMVLEFLISYLPNVEIPPIEGDK-EGVGYKVENLDMKGFKLAKENVDVVV 390          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351238 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835YIM8_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTI7_ECTSI1.260e-7730.89Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2GSF8_9STRA2.890e-1246.84Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6U4CVW6_9STRA2.470e-1029.41Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UG56_9STRA1.200e-949.30Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2A1I7_9STRA9.950e-954.29Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1A4I1_NOCSC9.310e-734.48Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S2E3J4_9STRA1.950e-528.10Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4DDP5_HETAK4.180e-535.53Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RTN5_9STRA4.240e-532.65Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..306
NoneNo IPR availableGENE3D3.15.10.10coord: 883..1016
e-value: 1.9E-9
score: 39.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 874..890
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..831
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..793
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..891
NoneNo IPR availablePANTHERPTHR31138CHROMOSOME 19, WHOLE GENOME SHOTGUN SEQUENCEcoord: 895..1012

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:122733..133872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351238mRNA_12101Tribonema minus UTEX_B_3156 mRNAContig_84 122733..133872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351238|estExt_Genemark1.C_Ctg_840022 ID=Trimin1|351238|estExt_Genemark1.C_Ctg_840022|Name=jgi.p|Trimin1|351238|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1029bp
MVTVQLADLVAAPVTAPGTCVLTAMGPGVLVKYREADDMHCVRLWRPRGT
GSALAYLNRASILAPLPASPGLEAITPLGKGTVLSYRRSPPVPNFAVDVG
FGTAFVTPADVSCPVAAVMPLIELVADGSAALMRARTRAARRSGAARSLL
DGLAALEPLAGRARAALSSAAAAANAPPPPPLPQPQEASLVDALVSAASG
DGGAVAGLQALLRARRAEFDALLAAARAEVAGERARARVDALLAATSAPE
FGGAVTTALSSLGEGLMELRRLATDASGGGGGGGELAAMVAEAKAAAARA
AQVQAELEGTRAAAVLKEGGAALGAELEATLFLDAADPDLEATLSLYADD
PDVVKARANSARLVQSLTAEDSPALRKAKELAEKARARLERPAGWKDAVI
GKAREAEVEGRGRVGDVIRAAAREGERARQAIMMLRGEATAATASDNVLR
FMEKLVLGWIDTAAADAAALADATAVTQTETALTQNGALRAPPLPPLCAA
DLVERYEAGVLPAELGAWGGGTGDGMVGRVRRVLEGYGSGAMGLDDAVSQ
AVEYLNSAEGEAAAASLVNSGGRHLAGLRSTGHSAAVRGLLTRLGDPALE
GRIKASVEGIDADRWLDMGERALTDEAARAALLTRIKRALANEAARAALL
TRIKDATVAFLLEYLPTLEVPPISGSSASSVAYTIANLDLSGFQLRAEDV
ELALPTKDVLDALSAAAEPHPSAAAAAPQRSAAAGLSASSRSPPRRRRSA
AGARVRTSLGGGGGGGGGGGGGGGSGIGPQPSTFTTSDPATARTAGDPTV
PMSAERKTTAGSAGGVGGGAGGGSGSGGGSGAAAPQQVLAAAAGGDAGSD
NGISARSGSIAGAAQAEQPAEAAGRRDSLGRRRLRRKSADTPPAPEVFAV
VARGVQAQFRGIQWAAKQETFPYGSGTGTADAMVVNGSVRIGFSLKRGTL
GGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCR
SLKDTLDKNASELLRTGTGFTSAYTIAS*
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