Trimin1|351176|estExt_Genemark1.C_Ctg_820053 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351176
Unique NameTrimin1|351176|estExt_Genemark1.C_Ctg_820053
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length332
Homology
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 603 bits (1556), Expect = 3.490e-217
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
Query:    1 MSTSVDLPLAVETGNVISSSSRSLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTETKLSVAAXXXXXXXXXXXXXXXXXXXXXSKVIRGSAPAANAAPLREEVTVHVVPTAAANEQYTLQVRRRGASTSTSP 331
            MSTSVDLPLAVETGNVISSSSRSLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTETKLSVAAXXXXXXXXXXXXXXXXXXXXXSKVIRGSAPAANAAPLREEVTVHVVPTAAANEQYTLQVRRRGASTSTSP
Sbjct:    1 MSTSVDLPLAVETGNVISSSSRSLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTETKLSVAAXXXXXXXXXXXXXXXXXXXXXSKVIRGSAPAANAAPLREEVTVHVVPTAAANEQYTLQVRRRGASTSTSP 331          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.840e-66
Identity = 120/232 (51.72%), Postives = 152/232 (65.52%), Query Frame = 0
Query:   10 AVETGNVISSSSRSLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKE 241
            AV+ G    S S +++  YS LL + P+ TK +T+A IAGMGD+ CQ+YT +R     A G  +          G  + +A  AA  G   +Q+H DW       R  +FMLL+ ALFAP+AH WY +L + + G T M  A KRMALDQF+F+PVF+G+FFSALMV+EGEAA+IP KL+QDYW TLV NW +WMPAQL NFRLVP  YQV  AN VG FWNA +S Q FK+
Sbjct:   34 AVQPG-AAESRSINIIQSYSRLLETNPIATKALTSAAIAGMGDIGCQIYT-NRGLAAAAAGAGEA---------GSNAGAADGAATWGSTSQQRHLDW------TRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLM-VATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKK 247          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A835YTE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE5_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.110e-53
Identity = 105/236 (44.49%), Postives = 134/236 (56.78%), Query Frame = 0
Query:   47 IAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFR---------------------------LVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTET 255
            ++ +GD+ACQLY AH+ W+        V    P      ++      A A  A+ Q+   WW AVDLKRT  F  LN  +F PSAHYWYQ+LA  V G     +A  + ALDQF+F PVFM +FF A+M+VEG++A I +KL  DY PTLV+NWG+W+PAQLINFR                           L+P PY+V+W N VG FWNA+MSAQ FK     E+ P A T T
Sbjct:    1 MSSLGDLACQLYIAHKEWKASEGRRWSVIASTPTY----STFEGDNEAIAEAARHQEGGRWWHAVDLKRTLTFTALNGIMFVPSAHYWYQILASAVDGMDHTASAFLKTALDQFVFTPVFMAMFFCAMMIVEGQSANIGKKLSHDYLPTLVRNWGVWIPAQLINFRTMGRESLHMLTDTLPSDEAQLFSGTMRLIPLPYEVVWVNAVGLFWNAVMSAQVFKAP---EDAPAAPTST 229          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.500e-52
Identity = 108/237 (45.57%), Postives = 137/237 (57.81%), Query Frame = 0
Query:   23 SLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEE----AQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTET 255
            S+   Y++LL SRPL TK VT+  IA  GDV+CQL     A  EE    AQ  +D   H P   GG  SV++                    +D  RT +F  + AA+ AP+ H WY  L + + G TA    VKR+ALDQ LFAPVF+ +F S +M+++G AAKI +KL+ DY  T+V NWG W+PAQ+INFR V   YQVL+AN VGFFWN  +S Q  K  L D E P AV  T
Sbjct:   68 SIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHVDDHEQHEPFGDGGATSVASE-------------------IDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPG-TAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAAVDVT 284          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.630e-51
Identity = 105/232 (45.26%), Postives = 134/232 (57.76%), Query Frame = 0
Query:   28 YSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEE----AQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVAVTET 255
            Y++LL SRPL TK VT+  IA  GDV+CQL     A  EE    AQ  +++  H P   GG  SV++                    +D  RT +F  + AA+ AP+ H WY  L + + G TA    VKR+ALDQ LFAP F+ +F S +M+++G AAKI +KL+ DY  TLV NWG W+PAQ+INFR V   YQVL+AN VGFFWN  +S Q  K  L D E P  V  T
Sbjct:    2 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVASE-------------------IDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPG-TAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAGVGVT 213          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 160 bits (406), Expect = 2.030e-44
Identity = 90/213 (42.25%), Postives = 122/213 (57.28%), Query Frame = 0
Query:   23 SLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMS 235
            SL  +Y+ LL + PL+TK +TA  IA + DV CQ                               VS P+  +A  +  ++  DW      KRT  F ++N  LF P AHYWY  L+  + G T M AA+KR+ LDQ LFAPV +  FFSA+++V GE+ +IP KL+ D   T++ N+ +W+PAQLINF+ VP PY+VLWAN VGFFWN  +S
Sbjct:   30 SLWQQYNKLLETHPLMTKCITAGAIAAVADVTCQ-------------------------------VSFPSDEDANKSLLER-MDW------KRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFM-AAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLS 203          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A7J8U408_9ROSI (Uncharacterized protein n=1 Tax=Gossypium klotzschianum TaxID=34286 RepID=A0A7J8U408_9ROSI)

HSP 1 Score: 147 bits (371), Expect = 1.320e-39
Identity = 81/220 (36.82%), Postives = 120/220 (54.55%), Query Frame = 0
Query:   24 LLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETL 243
            L +RY ALLA  P+LTK VT+A++  +GD+ CQL   H                            AP+                  +D+KRT  F LL   L  P+ H+WY  L+  VK P A GA + R+ LDQF+F+P+F+G+F S L+ +EG+ +++  KL+Q+++  ++ NW +W+P Q +NFR VPQ +QVL AN +   WN I+S +  KE L
Sbjct:   18 LFNRYLALLAKHPVLTKAVTSALLTCVGDLICQLAIDH----------------------------APS------------------LDVKRTFLFTLLGLVLVGPTLHFWYLCLSNLVKLPGASGA-ILRLLLDQFMFSPIFIGVFLSTLVTLEGKPSQVIPKLRQEWFSAVIANWQLWIPFQFLNFRFVPQQFQVLAANFIALVWNVILSFKAHKEIL 190          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: W7TYR6_9STRA (Mpv17/PMP22 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR6_9STRA)

HSP 1 Score: 144 bits (363), Expect = 9.720e-38
Identity = 80/211 (37.91%), Postives = 113/211 (53.55%), Query Frame = 0
Query:   28 YSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEG--EAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSA 236
            YS  L   P+ TK +T++ I G GDVACQ  T +   +E A                      P  A +       + DW+      RT KF LL   L  P+ H+WY  L +        GA +KR+A+DQ +FAP F+ +FFS L  ++G  +  ++ +KLK+DY  TL+ NW +W+PA ++NFR VPQ YQVL++N VGF WN  +SA
Sbjct:   61 YSRWLKDHPVKTKLLTSSFIMGAGDVACQFLTRYEKQQERA-------------------TDLPNVARSSPTPTLPY-DWY------RTAKFFLLGGVLVGPALHHWYSFLIRLAPVQNTSGA-LKRLAVDQCIFAPAFIPVFFSGLQFLDGNFDMDQLRRKLKRDYKETLIANWAVWIPAMMVNFRFVPQHYQVLYSNAVGFCWNIFLSA 244          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: UPI0014834330 (protein Mpv17-like n=1 Tax=Prunus dulcis TaxID=3755 RepID=UPI0014834330)

HSP 1 Score: 135 bits (340), Expect = 1.300e-35
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 0
Query:  111 VDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETL 243
            +DLKRT  F LL   L  P+ H+WY  L+K V  P A GA  +R+ LDQF+F+P+F+G+F S LM +EG+ +++  KL+Q+++  ++ NW +W+P Q +NFR VPQ +QVL AN +   WN I+S +  KE L
Sbjct:   12 LDLKRTFLFTLLGLVLVGPTLHFWYLYLSKLVTTPGASGA-FQRLLLDQFIFSPIFIGVFLSTLMTLEGKPSQVVPKLQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANSISLIWNVILSFKAHKEVL 143          
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Match: A0A024G821_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G821_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.390e-35
Identity = 86/223 (38.57%), Postives = 115/223 (51.57%), Query Frame = 0
Query:   15 NVISSSS--RSLLDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMS 235
            N I S S  RSL   Y   L  RP LTK +TA  IA  GD+ CQ+     A E+   G+ +             +     A +   +K          +D KR   F  L   +  P  H+WY  L++   G     A  KR+ LDQFLFAP F+ +FF+ L+ +EG+  K+  KL Q++WPT+  NW +W+PAQLINF  VP   QVL+AN VG FWNA +S
Sbjct:   67 NTIKSKSFFRSLWMAYEQALQHRPYLTKTITATTIAATGDIICQI-----ALEKGLVGDLN-----------ALNEKQKLAVQGDASKI--------VIDWKRLAIFSFLTGVVMTPILHHWYLFLSRNFAG-AGKQAIAKRLILDQFLFAPSFLPIFFTMLLTLEGKFDKVASKLHQEWWPTIKTNWIVWIPAQLINFGFVPGNLQVLFANVVGLFWNAYLS 264          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351176 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKC9_9STRA3.490e-217100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNC4_9STRA5.840e-6651.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTE5_9STRA1.110e-5344.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JL95_9PHAE1.500e-5245.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH2_ECTSI1.630e-5145.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4Q2YFM0_9BACT2.030e-4442.25Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
A0A7J8U408_9ROSI1.320e-3936.82Uncharacterized protein n=1 Tax=Gossypium klotzsch... [more]
W7TYR6_9STRA9.720e-3837.91Mpv17/PMP22 n=3 Tax=Nannochloropsis gaditana TaxID... [more]
UPI00148343301.300e-3545.86protein Mpv17-like n=1 Tax=Prunus dulcis TaxID=375... [more]
A0A024G821_9STRA1.390e-3538.57Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 176..235
e-value: 1.5E-22
score: 79.6
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 23..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..292
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 23..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:474694..479194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351176mRNA_10982Tribonema minus UTEX_B_3156 mRNAContig_82 474431..479194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351176|estExt_Genemark1.C_Ctg_820053 ID=Trimin1|351176|estExt_Genemark1.C_Ctg_820053|Name=jgi.p|Trimin1|351176|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=332bp
MSTSVDLPLAVETGNVISSSSRSLLDRYSALLASRPLLTKGVTAAIIAGM
GDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAK
RQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGA
AVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNW
GIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPV
AVTETKLSVAASSGSSGSGPSAGGGSGGGGGGSKVIRGSAPAANAAPLRE
EVTVHVVPTAAANEQYTLQVRRRGASTSTSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22