Trimin1|351175|estExt_Genemark1.C_Ctg_820050 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351175
Unique NameTrimin1|351175|estExt_Genemark1.C_Ctg_820050
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length345
Homology
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A835YSB3_9STRA (DUF218 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB3_9STRA)

HSP 1 Score: 551 bits (1419), Expect = 7.010e-196
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query:    1 MIRARPRGAVVGHSVSFLMQVVAARALGSVAANHVLPPAVTGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELLERYGS 344
            MIRARPRGAVVGHSVSFLMQVVAARALGSVAANHVLPPAVTGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELLERYGS
Sbjct:    1 MIRARPRGAVVGHSVSFLMQVVAARALGSVAANHVLPPAVTGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELLERYGS 344          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A7S0V9E4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V9E4_9CRYP)

HSP 1 Score: 156 bits (394), Expect = 2.070e-41
Identity = 100/301 (33.22%), Postives = 138/301 (45.85%), Query Frame = 0
Query:   40 VTGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELLE 340
            VTG++VHG HL   GW+ +++GD S Q+LGR+     L   EDP  VVF +G SE+DGK+EG+   DYL+ ++ RL+ F   F   DL  L   +  R V +T   NT +EL           + R++LVSSPTH+PRC RDA  ++                                                             GTA +                  WA  +L+C P  T + G+ P DVA+VEPPHRGDRD  LD   L G++NR++++P R R G    L + LE
Sbjct:   86 VTGIIVHGCHLHTDGWERIVFGDPSTQELGRVSQAALLMLEEDPVCVVFGTGGSEKDGKREGDFTRDYLLENFQRLALFN-VFAGIDLGRLERLMRERSVAETTSRNTVEELERGADILREHRIERLILVSSPTHLPRCLRDACVVY-------------------------------------------------------------GTARS--------------ERFPWAARLLVC-PSGTSYTGAKPEDVAVVEPPHRGDRDRNLDRPMLGGIINRLYAVPPRTRRGLVLQLEKQLE 309          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A7S0Y436_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y436_HEMAN)

HSP 1 Score: 150 bits (380), Expect = 1.110e-39
Identity = 97/300 (32.33%), Postives = 137/300 (45.67%), Query Frame = 0
Query:   41 TGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELLE 340
            TG+LVHG HL   GW+ +++GD + Q+LGR+     L   E+P  VVF SG SE+DG  EG+   DY   ++ +L+ F + F   DL+ L   +  R V +T   NT +EL  AG    +  V R++LVSSPTH+PRC RDA  ++                                                             GT              V +    W   VL+ SP  T + G+S  DVA++EPPHRGDRD  LD   L G++NR++++P + R G    L + LE
Sbjct:   53 TGILVHGCHLHTDGWERIVFGDPATQELGRVAQAALLMMEENPVCVVFGSGGSEKDGMMEGKFTRDYFFENFQKLARF-DVFAGADLERLERLMRERSVAETVSKNTVEELELAGEILRKHNVERLILVSSPTHLPRCLRDACVVY-------------------------------------------------------------GT--------------VRSEKCPWGARVLV-SPSGTSYEGASAGDVAVIEPPHRGDRDPALDKPLLSGVINRLYAIPPKKRRGLVLQLEKQLE 275          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A7S1WQL9_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WQL9_ALECA)

HSP 1 Score: 131 bits (329), Expect = 8.450e-33
Identity = 93/293 (31.74%), Postives = 124/293 (42.32%), Query Frame = 0
Query:   38 PAVTGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPG 330
            P  TG+LVHG HL A GW+ ++WG      LGRLPH V LA  E  +VV+F +GASE+DGKKE E    YL  HW  L+ F+   R   L+   A +    VVD +  NT +E+      F  +     + VSSPTH+PRC   A                                                                           ++        G  +A      SP DTC+ G++  DV +VEPPHRGDRD +LD++  H LV R + +P R+R G
Sbjct:   17 PRGTGILVHGCHLKADGWEQIVWGSPPHD-LGRLPHAVLLAWEEQASVVMFGTGASEKDGKKESEYTIQYLWDHWHALAEFEPLHR-VPLEEAEALMRRIAVVDARTQNTDEEVREGLRLFQESNCDHAIFVSSPTHLPRCLACACK-------------------------------------------------------------------------IVEQEPELFEGPIYA------SPSDTCYEGAAAGDVVVVEPPHRGDRDKSLDALKFHELVRRCYGVP-RERKG 227          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A2E1VUF3_9BACT (DUF218 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VUF3_9BACT)

HSP 1 Score: 122 bits (306), Expect = 1.980e-29
Identity = 69/150 (46.00%), Postives = 92/150 (61.33%), Query Frame = 0
Query:   41 TGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASER----DGK----KEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDA 182
            TG+LVHG HLDA  W  ++WG     +LGR P  V +A +E   V+VF +GASER    DGK    KEGE   DYL++H+  L+ F  AF   DL+AL  ++    V +++  NTR+E+  A   F   GV R++LVSSPTH+ RC RDA
Sbjct:    3 TGVLVHGCHLDAYDWRGIVWGYPDAGELGRAPKGVLVAHQEQADVLVFGTGASERVVDRDGKRVVMKEGEYTLDYLLQHFDELADFP-AFGKVDLEALRRQIESTAVAESRSQNTREEVVEAAEHFLERGVERMILVSSPTHISRCVRDA 151          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A7S0YME2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YME2_9CRYP)

HSP 1 Score: 124 bits (310), Expect = 7.830e-29
Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 0
Query:   40 VTGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALW 186
            VTG++VHG HL   GW+ +++GD S Q+LGR+     L   EDP  VVF +G SE+DGK+EG+   DYL+ ++ RL+ F   F   DL  L   +  R V +T   NT +EL           + R++LVSSPTH+PRC RDA  ++
Sbjct:   86 VTGIIVHGCHLHTDGWERIVFGDPSTQELGRVSQAALLMLEEDPVCVVFGTGGSEKDGKREGDFTRDYLLENFQRLALFN-VFAGIDLGRLERLMRERSVAETTSRNTVEELERGADILREHRIERLILVSSPTHLPRCLRDACVVY 231          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A7S0HX73_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HX73_9CRYP)

HSP 1 Score: 118 bits (296), Expect = 2.540e-28
Identity = 84/280 (30.00%), Postives = 123/280 (43.93%), Query Frame = 0
Query:   61 GDESQQQLGRLPHFVKLAAREDPAVVVFSSGASE-RDGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAAATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPHRGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELL 339
            G E   +LGR+P  V +A  E+ AVV+F +G S+  DG  EGEV   ++  ++ RL +FK+ F+D DL  L  R+   C V+T+ +NT QEL   G       V +++LVSSPTH+PRC RDA  ++ G                                                                              S  ++A ++  C P DTC+  S+  DVAIVEPPHRGDR+   D  PL+  +N+ F +P   +    + ++ LL
Sbjct:    1 GREELNELGRIPQAVLVAYHEEAAVVLFGTGGSKSEDGVLEGEVTMQFMFENFERLKNFKQ-FQDIDLGRLRERMAEICKVETKSLNTLQELEMCGEIMHNQQVQKIILVSSPTHLPRCIRDAKKVFDG------------------------------------------------------------------------------SKFSFANAIFAC-PSDTCYMNSTVEDVAIVEPPHRGDREKEFDRWPLYKYLNKFFKVPRDTKLKVLQAISSLL 200          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A1F5PJ44_9BACT (Uncharacterized protein n=1 Tax=Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_11 TaxID=1817828 RepID=A0A1F5PJ44_9BACT)

HSP 1 Score: 119 bits (297), Expect = 5.120e-28
Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = 0
Query:   41 TGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKEGEVIYDYLVRHWPRLSHFKE-----AFRDCDLDALAARLLPRC-VVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASAL 185
            T +L+HG H+DA GW+ ++WGD  +  LGR+P  + LA  E+  ++ + +GASER+GKKE ++I+ Y +RH   L    E      +R         +LLP+   +D    NT QE+ AA A     G+TR++LVSSPTH+ RC +DA  L
Sbjct:    6 TAILIHGCHVDAEGWERIIWGDPEKGLLGRIPTGIALALSEEADLIFWGTGASERNGKKESQIIFQYALRHLEELPALFERAGRVTYRKYPTPFELEKLLPKISYIDLVTQNTAQEVEAAAAECRARGITRLILVSSPTHIGRCRQDADKL 156          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: L1J676_GUITC (DUF218 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J676_GUITC)

HSP 1 Score: 118 bits (295), Expect = 1.260e-27
Identity = 62/147 (42.18%), Postives = 88/147 (59.86%), Query Frame = 0
Query:   41 TGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASER-DGKKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALW 186
            TG+LVHG HL A GW+ + WG E   +LGR+P  V +A RE   +V+F +G S+  DG  EGE    Y+  ++ RL +F+E F + DL  L   +   C  +T+ +NT QEL   G       + +V+LVSSPTH+PRC RDA  ++
Sbjct:   65 TGVLVHGCHLQAEGWEEIAWGREETNELGRIPQAVLVAHREGADMVLFGTGGSKSSDGVMEGEYTMRYMFDNFERLKNFRE-FEEADLARLKETMRLICRSETRSLNTVQELELCGQIMHNEQIQKVILVSSPTHLPRCMRDAKVVF 210          
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Match: A0A7V7MMY6_9BACT (DUF218 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7MMY6_9BACT)

HSP 1 Score: 117 bits (293), Expect = 1.520e-27
Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 0
Query:   41 TGMLVHGYHLDAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGAS----ERDG----KKEGEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQELAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLG 188
            TG+LVHG HL+A  W  + WG   + +LGR+P  V +A   +  ++VF +GAS    E DG    K+EGE    +L+R +  L+ FK AF   DL AL  R+    V D   +NT QE+  A   F R G+  +VLVSSPTH+PRC RDA A  +G
Sbjct:    3 TGVLVHGCHLEAYDWRGIAWGYPDRNELGRIPKGVLVALETNADLLVFGTGASCRLVEEDGQQIVKREGEYTLGFLLRRFEELAEFK-AFEGVDLAALRKRVEGIAVADVDSMNTEQEVRNAARMFLRQGIEGMVLVSSPTHLPRCLRDACAALVG 157          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351175 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSB3_9STRA7.010e-196100.00DUF218 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S0V9E4_9CRYP2.070e-4133.22Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0Y436_HEMAN1.110e-3932.33Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S1WQL9_ALECA8.450e-3331.74Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A2E1VUF3_9BACT1.980e-2946.00DUF218 domain-containing protein n=1 Tax=Planctomy... [more]
A0A7S0YME2_9CRYP7.830e-2942.86Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0HX73_9CRYP2.540e-2830.00Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A1F5PJ44_9BACT5.120e-2840.40Uncharacterized protein n=1 Tax=Candidatus Doudnab... [more]
L1J676_GUITC1.260e-2742.18DUF218 domain-containing protein n=1 Tax=Guillardi... [more]
A0A7V7MMY6_9BACT1.520e-2743.59DUF218 domain-containing protein n=1 Tax=Planctomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003848Domain of unknown function DUF218PFAMPF02698DUF218coord: 58..185
e-value: 3.1E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:445054..447660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351175mRNA_10980Tribonema minus UTEX_B_3156 mRNAContig_82 445010..447742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351175|estExt_Genemark1.C_Ctg_820050 ID=Trimin1|351175|estExt_Genemark1.C_Ctg_820050|Name=jgi.p|Trimin1|351175|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=345bp
MIRARPRGAVVGHSVSFLMQVVAARALGSVAANHVLPPAVTGMLVHGYHL
DAAGWDHVMWGDESQQQLGRLPHFVKLAAREDPAVVVFSSGASERDGKKE
GEVIYDYLVRHWPRLSHFKEAFRDCDLDALAARLLPRCVVDTQPVNTRQE
LAAAGAAFARAGVTRVVLVSSPTHVPRCARDASALWLGGGGSGGGCGGSA
AAATSGGGAASDGRGSGAVVSAAAGSSRSATVDAAGGAGSGGGSRRAGTA
AATIDSAVMGVTDVTASGLAWAPSVLLCSPCDTCWPGSSPSDVAIVEPPH
RGDRDVTLDSVPLHGLVNRMFSLPARDRPGFQRDLNELLERYGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003848DUF218