Trimin1|351160|estExt_Genemark1.C_Ctg_820015 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351160
Unique NameTrimin1|351160|estExt_Genemark1.C_Ctg_820015
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length142
Homology
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A836C850_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C850_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.840e-45
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query:    1 MGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK 142
            MGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK
Sbjct:    1 MGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK 142          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A836CG11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG11_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.460e-14
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 0
Query:   64 GGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPS 128
            GGAHAMP GK MLILQQRQTAAMEQMAAATXXXXXXXXXXXXXX  VLAH+QGKQDKT+A+SAPS
Sbjct: 1111 GGAHAMPLGKDMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXXXVLAHIQGKQDKTDAASAPS 1175          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A835Z640_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z640_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.460e-14
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 0
Query:   64 GGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPS 128
            GGAHAMP GK MLILQQRQTAAMEQMAAATXXXXXXXXXXXXXX  VLAH+QGKQDKT+A+SAPS
Sbjct: 1113 GGAHAMPLGKDMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXXXVLAHIQGKQDKTDAASAPS 1177          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A836CEZ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEZ5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.420e-14
Identity = 50/80 (62.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   64 GGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDK-----TNASSAPSVSTAPSTAAS 138
            GGA AMP GK MLILQQRQTAAMEQ+AAAT        X     AAVLAH+QGKQD      T A+ APSV+ APS+AAS
Sbjct:   87 GGAQAMPYGKDMLILQQRQTAAMEQLAAATAAAQATSVXTQATLAAVLAHIQGKQDASSPPPTTAAPAPSVTAAPSSAAS 166          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A836CBE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBE3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.020e-11
Identity = 48/70 (68.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query:   64 GGAHAMPCG--KYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVST 131
            GGAHAMPCG   YMLILQQRQTAAM+      XXX    XX     AAVLAHVQ KQ+K NASSAPSVST
Sbjct:  114 GGAHAMPCGIYYYMLILQQRQTAAMKXXXXXXXXXQATSXXSQATLAAVLAHVQCKQEKINASSAPSVST 183          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A835Z5U2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.530e-11
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0
Query:   66 AHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQG 116
            AHAMPCGKYMLILQQRQTAAMEQMAAATXXX XXXXXXXX  AAVLAHVQG
Sbjct:  952 AHAMPCGKYMLILQQRQTAAMEQMAAATXXXQXXXXXXXXTLAAVLAHVQG 1002          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A835Z0H7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.220e-7
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 0
Query:   64 GGAHAMPCGKYMLILQQRQTAAMEQMAAAT 93
            GG HAMPCGK MLILQQRQTAAMEQMAAAT
Sbjct:  979 GGTHAMPCGKDMLILQQRQTAAMEQMAAAT 1008          
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Match: A0A835YQ45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ45_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.080e-6
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
Query:   65 GAHAMPCGKYMLILQQRQTAAMEQMAAAT 93
            G HAMPCGK MLILQQRQTAAMEQMAAAT
Sbjct: 1551 GTHAMPCGKDMLILQQRQTAAMEQMAAAT 1579          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351160 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836C850_9STRA1.840e-45100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CG11_9STRA2.460e-1489.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z640_9STRA2.460e-1489.23Uncharacterized protein n=4 Tax=Tribonema minus Ta... [more]
A0A836CEZ5_9STRA4.420e-1462.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBE3_9STRA5.020e-1168.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5U2_9STRA5.530e-1194.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0H7_9STRA3.220e-793.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQ45_9STRA2.080e-693.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:115979..116404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351160mRNA_10937Tribonema minus UTEX_B_3156 mRNAContig_82 115631..116406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351160|estExt_Genemark1.C_Ctg_820015 ID=Trimin1|351160|estExt_Genemark1.C_Ctg_820015|Name=jgi.p|Trimin1|351160|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=142bp
MGKKIMCMTAPKQDRACACPSTSGSTTGTGRRQLLVPARASAAAAVPAVA
ASAVGVQVQTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATAAAQATS
AASQATLAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK
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