Trimin1|351137|estExt_Genemark1.C_Ctg_810049 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351137
Unique NameTrimin1|351137|estExt_Genemark1.C_Ctg_810049
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length685
Homology
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A835YJ34_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ34_9STRA)

HSP 1 Score: 1097 bits (2836), Expect = 0.000e+0
Identity = 684/684 (100.00%), Postives = 684/684 (100.00%), Query Frame = 0
Query:    1 MGKPRGNGRGPPGKGRYQWSSKKDKKDAHSREAHDPVDTPRDHRKQEWAKPHPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATSLKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYSDTGGVDTSNFRQRKPTPAESAVRGGXXXXXXXXXXARRKLQHRLPKERAARQVSVGARR 684
            MGKPRGNGRGPPGKGRYQWSSKKDKKDAHSREAHDPVDTPRDHRKQEWAKPHPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATSLKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYSDTGGVDTSNFRQRKPTPAESAVRGGXXXXXXXXXXARRKLQHRLPKERAARQVSVGARR
Sbjct:    1 MGKPRGNGRGPPGKGRYQWSSKKDKKDAHSREAHDPVDTPRDHRKQEWAKPHPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATSLKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYSDTGGVDTSNFRQRKPTPAESAVRGGXXXXXXXXXXARRKLQHRLPKERAARQVSVGARR 684          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: D8LBC7_ECTSI (tRNA Pseudouridine Synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC7_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.520e-67
Identity = 182/553 (32.91%), Postives = 256/553 (46.29%), Query Frame = 0
Query:   88 VGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWE--------ASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRW------LSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATS--LKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNY 624
            V L+I Y G   +G+Q+N GA T+EAELE ALYL G IS  NFG  +K+ W+RA RTD GVHA + V+++K+                        +GE+                    E +   +N +LPD IR + + R    F+++  C+GRRY Y++PT  LA   Y+  L   A  WE        +S     G+  D++A          A   A   P E                     A +A   A+  S+   G              A +  T A                                       E EG+G        EG+E R       LSSPAV+ RVAE+L+ +R+ P++L  LRE L  F GTKNYHNYT  + ATD SC R++ SFTA +PF   G+EW+ L+V GQSF++HQIRKMVA+ VD VR Q++ ED  +S     + LG+APS GL+L++  +  Y +    A A    L+   G AA A     +++I + I+  E A   F AWLD ++++P NY
Sbjct:  193 VALLISYWGNNYQGLQINKGARTIEAELELALYLAGTISKDNFGNPRKVSWSRAGRTDKGVHAAAQVISVKLTY--------------------LNDGER--------------------ETVEK-INKYLPDDIRAVDIRRAPKSFDSRTRCSGRRYEYIMPTYVLAPKAYVTDLFETALEWEMAHAGGGDSSAVDDLGETADISAVAGGSIQVDAAQLAAGSPPPE------------------AAQAENASSGAVLPSAGAVGTEASGLTDAADAAAAASMETPAAGRRQGHAVGAADDDGASEYSGRSDT--EGDDDDGNSQQEYEGSGD-------EGKEARLRQAAVELSSPAVVQRVAEQLKGYRLKPDRLEDLRETLKGFLGTKNYHNYTNHKKATDASCKRLITSFTASDPFEHEGMEWIRLTVGGQSFIMHQIRKMVASTVDRVRGQSNPEDFTKSFLPEKINLGIAPSDGLYLERPLYEPYNKDVKRAKAHDRLLEWETGPAAEALEDFKKNKIHAGILAKEQADYDFVAWLDRITRYPCNY 677          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A067C2J0_SAPPC (PseudoU_synth_1 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2J0_SAPPC)

HSP 1 Score: 182 bits (462), Expect = 6.110e-47
Identity = 165/576 (28.65%), Postives = 225/576 (39.06%), Query Frame = 0
Query:   52 HPGSFAGELRSLLDPEPLAQLQAADGTPQ-GKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATSLKCREGSAAAARVTAMR-DRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYS 625
            HPGS+A            AQL   D + + G   KR+ GL+I YCG    GMQ+N G  TVEAELE+ALY  G I+  N+G++QKIGW RAARTD GVHA   +V  K+ V                 EGT                   EDE       R  VN+ LP  IRVL+V  VT  FNAKN+C  R Y YL PT                                                  V +P+  P+                 +A S DQ   P  +H N                                                                                    ++ AV     +K + +R+      +++  LAL+ GT N+HN+T +     P C+R + SF A +PFV  G EW+ + V GQSF+LH IRKM+ T +DV+R    +  + ++  Q  M L  APS GL+L K  F +Y ++       SL+  E  A  AR+ A + D+I   I++ E  H  F  WL  +  FP +Y+
Sbjct:   53 HPGSYA------------AQLDPTDTSDKCGTGPKRRYGLLIAYCGREYSGMQMNIGVKTVEAELEQALYNAGAIARCNYGFIQKIGWNRAARTDKGVHAAGQLVCAKLCV-----------------EGT-------------------EDE------FRDKVNSFLPKDIRVLEVVAVTKNFNAKNSCDRRTYEYLAPTF-------------------------------------------------VFQPSAAPSS----------------SAVSNDQ---PWDAHAN---------------------------------------------------------------------------------ELFTNLAVDPAAWQKQKEYRLDDATYDKIQATLALYEGTHNFHNFTSKLPPYSPKCNRYIMSFKADKPFVLNGSEWIRMRVIGQSFLLHHIRKMIGTMIDVIRGATPIATISKAFEQTKMDLPKAPSAGLYLAKAHFDVYNDK-NENHRPSLEFDE-PAQLARIEAFKHDQIFPEIMEKEEQHAIFPLWLLQLDAFPFSYA 423          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A3R7IET8_9STRA (PseudoU_synth_1 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IET8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.050e-45
Identity = 162/611 (26.51%), Postives = 230/611 (37.64%), Query Frame = 0
Query:   19 WSSKKDKKDAHSREAHDPVD--TPRDHRKQEWAKPHPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATS---LKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNY 624
            W+ K+  K A      D  D  T +DHR       HPGS+A + +   D  P      +   P     KR+ GL + +CG    GMQ+N G  T+EAELE+AL+  GGI+ +N+G+LQKIGW+RAARTD GVHA   ++  K+ V           G D                                E     VNA LP  IRV+++  VT  FNAK +C  R Y YL PT   A            +A   ++P+   +                                                  + D +  P + H +                                                                            EG     +   A +    E  + FR++ E L +L   L  + GT N+HN+T +   T+P   R + SF A  PFV+  +EWV L V GQSF+LH IRKM+ T V+VV     +  ++R++    M L  APS GL+L +  F +Y  +   A  TS   L  +E + AAA     RD I  HI+  E     +  W+  +   P +Y
Sbjct:   10 WAVKRKNKHARREGQQDGGDKETKQDHRSNRSETVHPGSYAAQRQPSTDATPSTSASESVVQP----TKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLLV-----------GDD-------------------------------EEGFVAKVNAALPADIRVMQMVTVTKSFNAKMSCDQRTYEYLAPTFIFAK-----------RAHSVAKPKCEEE--------------------------------------------------TKDATLWPSNLHDS---------------------------------------------------------------------------EEGINNNLVIDEATL----ETHKAFRLSEETLVQLNAALKQYEGTHNFHNFTSKMEPTNPQAMRYIISFEAERPFVQNNMEWVRLRVVGQSFLLHHIRKMIGTVVEVVSGVTELNTIERAMQLQKMDLPKAPSVGLYLAQAHFEVYNMKMEEAIQTSHPSLNLKEPAVAAAVEQFKRDFIFDHIMQHEEQTRTYAKWVRTLETLPFDY 434          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A329SF03_9STRA (PseudoU_synth_1 domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SF03_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.320e-42
Identity = 156/576 (27.08%), Postives = 217/576 (37.67%), Query Frame = 0
Query:   52 HPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATS---LKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNY 624
            HPGS+A + +    P       AAD        KR+ GL + +CG    GMQ+N G  T+EAELE+AL+  GGI+ +N+GYLQKIGW+RAARTD GVHA   ++  K+ V                                        D+ A   A    VNA LP+ IRV+ +  VT  FNAK +C  R Y YL PT       +I G                                                                       + A P +S  N                                                              E++  G           E+ +  +  +     E  + FR++ E L +L   L  + GT N+HN+T +   T+P  +R + SF A  PFV+  +EWV L V GQSF+LH IRKM+ TAV++V        ++R++    M L  APS GL+L +  F +Y  +   +  TS   L  +E S AAA     RD I  HI+  E     +  WL  M   P +Y
Sbjct:   46 HPGSYAAQRQRSETP-------AADAPSL--PTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGYLQKIGWSRAARTDKGVHAAGQLLTAKLHVG---------------------------------------DDIA---AFIAKVNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPT-------FIFG-----------------------------------------------------------------------KRARPSTSSKN-------------------------------------------------------------EEKQAEGASQWPSDLRDSEEGFDDNVVIDNTTLEAHKAFRLSDETLEQLNATLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQNDMEWVRLCVVGQSFLLHHIRKMIGTAVEIVSGVTDPSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMEDSIQTSHPPLDLKEPSVAAAVELFKRDFIFDHIMKHEERTRTYAKWLRTMEVLPFDY 431          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: G4YFE8_PHYSP (PseudoU_synth_1 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YFE8_PHYSP)

HSP 1 Score: 169 bits (428), Expect = 6.460e-42
Identity = 171/637 (26.84%), Postives = 239/637 (37.52%), Query Frame = 0
Query:   19 WSSKKDKKDAHSREAHDPVDTPRDHRKQEWAKPHPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAW-EASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASAD-QSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATS---LKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYSDTGGVDTSNFRQRKPTPAESAVRGG 650
            W++++  K A      D  +   D R +     HPGS+A + R    P       AAD        KR+ GL + +CG    GMQ+N G  T+EAELE+AL+  GGI+ +N+G+LQKIGW+RAARTD GVHA   ++  K+ V                                         E A   A    VNA LP+ IRV+ +  VT  FNAK  C  R Y YL PT       +I    A A A  E+ +    GD                                                AA+A   S L  S  G                                                                                   +  +  +     E  + FR++ E L +L   L  + GT N+HN+T +   T+P   R + SF A  PFV+  +EWV L V GQSF+LH IRKM+ TAV++V        ++R++    M L  APS GL+L +  F +Y  +   +  TS   L  +E + AAA     RD I  HI+  E     +  WL  M   P +Y     ++   +++ K   AE   R G
Sbjct:   10 WAARRKTKQARRDGQPDDAEPRPDRRAERSDAVHPGSYAAQ-RQRQHPT-----DAADKPALSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHVG----------------------------------------EDADIPAFVGKVNAALPEDIRVMHMVTVTKNFNAKMTCDQRTYEYLAPT-------FIFAKRARAAAIKESEKTEEKGD------------------------------------------------AATAQWPSDLRDSEEG-----------------------------------------------------------------------------------FDDNVVIDNTTLEAHKAFRLSDETLEKLNATLKEYVGTHNFHNFTSKMEPTNPQAKRFIISFEAERPFVQNDMEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDPSTIERAMQLTKMDLPKAPSVGLYLAQAHFEVYNLKMAESIQTSHPPLDLKEPAVAAAVELFKRDFIFDHIMKHEERTRTYAKWLRTMEVLPFDYVAKPYLE---WKKEKEEEAERTDRAG 459          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A225WAC7_9STRA (tRNA pseudouridine(38-40) synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WAC7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.110e-41
Identity = 159/577 (27.56%), Postives = 214/577 (37.09%), Query Frame = 0
Query:   52 HPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAV-DAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATS---LKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNY 624
            HPGS+A +   L  P     L            KR+ GL + +CG    GMQ+N G  T+EAELE+AL+  GGI+ +N+G+LQKIGW+RAARTD GVHA   ++  K+ V D  P                                           A    VNA LPD IRV+ +  VT  FNAK  C  R Y YL PT       +I G  A A                             AA    V+  E                     AA+   S L  S  G                                                                                   +     + +   E  + FR+  + L +L   L  + GT N+HN+T +   T+P  +R + SF A  PFV+ G+EWV L V GQSF+LH IRKM+ TAV++V        + R++    M L  APS GL+L +  F +Y  +   +  TS   L  +E   AAA     RD I  HI+  E +   +  WL  M   P +Y
Sbjct:   44 HPGSYAAQRPRLESPVMSTSLPT----------KRRYGLWVAFCGKNYSGMQMNEGVNTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHVGDNIP-------------------------------------------AFVVKVNAALPDDIRVMHMVTVTKNFNAKMTCDQRTYEYLAPT-------FIFGKRARA-----------------------------AASKNTVKNEEK-----------------ETEAATQWPSDLRDSKEG-----------------------------------------------------------------------------------FNHDVVIDSMTLEAHKAFRLCDKTLEQLNTTLKKYVGTHNFHNFTSKMEPTNPQANRFILSFEAERPFVQNGMEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTGAATVDRAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMVDSIQTSHPPLDLKEADVAAAIEQFKRDFIFDHIMKHEESTRTYAKWLRTMEVLPFDY 431          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A2P4XQU8_9STRA (tRNA pseudouridine(38-40) synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQU8_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.080e-41
Identity = 160/577 (27.73%), Postives = 219/577 (37.95%), Query Frame = 0
Query:   52 HPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVI-ARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEERYGAADATS---LKCREGSAAAARVTAMRDRIVSHIVDGEAAHLQFCAWLDYMSKFPKNY 624
            HPGS+A + +    P        AD T      KR+ GL + +CG    GMQ+N G  T+EAELE+AL+  GGI+ +N+G+LQKIGW+RAARTD GVHA   ++  K+ V           G D                                 A    VNA LP+ IRV+ +  VT  FNAK  C  R Y YL PT       +I G     K   A+ P+ A  + +  A                                          AA+   S L  S  G                                                                                    L+   VI +   E  + FR+  E L +L   L  + GT N+HN+T +   T+P  +R + SF A +PFV+  +EWV L V GQSF+LH IRKM+ TAV++V        ++R++    M L  APS GL+L +  F +Y  +   +  TS   L  +E   AAA      D I  HI+  E     +  WL  M   P +Y
Sbjct:   44 HPGSYAAQHQRSQTP--------ADSTSL--PTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV-----------GDDIP-------------------------------AFVAKVNAALPEDIRVMHMVTVTKNFNAKMTCDQRTYEYLAPT-------FIFG-----KRTRAAVPKDAEKSEEKEAD-----------------------------------------AATQWPSDLRDSEEG------------------------------------------------------------------------------------LNDNVVIDSTTLEAHKAFRLDDETLEKLNTTLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAEQPFVQNDMEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDTSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMADSIQTSHPPLDLKEPGVAAAVEQFKHDYIFDHIMKHEEHTRTYAKWLRTMEILPFDY 431          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A2R6XX75_MARPO (PseudoU_synth_1 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XX75_MARPO)

HSP 1 Score: 167 bits (424), Expect = 3.300e-41
Identity = 162/570 (28.42%), Postives = 226/570 (39.65%), Query Frame = 0
Query:   53 PGSFAGELRSLLDPEPLAQLQAADGTPQGKK-AKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXER--EGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQ-AHMILGLAPSKGLFLDKLFFSMYEERYGAADATSLKCREGSAAAARVTAMR----DRIVSHIVDGEAAHLQFCAWL 614
            P S A E+      +P A+  +++G  + K+  KRK+ L+I YCG G +GMQ N GA T+E ELEKAL+  G I ++N G  +K+GW RAARTD GV A+  VV+    +D P                                             +   VN+HLP  IRVL   RVT  F+AK  C  RRY Y+LP      P+ +   LAE                                     + A NP                   A+  D  A+   +  +G                T  T A                         AP            +R    A           E +++L   +           F+   + + RL  VL  F G+ +YHN+T R  ATDPS  R + SF A   FV  GVE+V  SV GQSFMLHQIR+MV  AV VVR  A    ++ +L + + + + +AP  GLFL++ ++S Y  ++G       K  E  +     T +R    + I  HI   EA  L F +W+
Sbjct:   51 PLSVADEIE-----DPSAKRSSSNGDREPKRYKKRKIALMIAYCGAGFQGMQRNPGATTIEGELEKALFQAGAIQDSNVGQPKKVGWMRAARTDKGVSALGQVVSGNFFIDPP--------------------------------------------GLVERVNSHLPAPIRVLGYKRVTPSFDAKQNCVRRRYEYVLPVYVFD-PDLVTACLAE-------------------------------------QEANNPG------------------ASELDDGAIAALTSSDGAVQSDST---------TVDTTAVDVSDTASEQQTRSVSAIALSDVETAPAPRIQNPEEDGNQRATRAAAKEAEKDMEMAEIRKYLMEKSGAKNA------FQFGEDCINRLNRVLGRFVGSHSYHNFTPRTKATDPSSLRYIISFEAESKFVVDGVEFVRCSVVGQSFMLHQIRRMVGLAVAVVRGCAPESILETALRRDSEVKVPMAPELGLFLEECYYSSYNSKFG-------KLHEEVSLVDYTTDVRKFKHEVIYPHIASTEARDLVFASWV 493          
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Match: A0A7S1TVP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVP3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.020e-39
Identity = 182/593 (30.69%), Postives = 259/593 (43.68%), Query Frame = 0
Query:   54 GSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMRGMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHAVSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGXXXXGVQAGGEAEDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYT-IRRAATDPSCSRVMRSFTAGEPFVRG----GVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEER----------YGAADATSLKCREGSAAAARVTAMRD-----RIVSHIVDGEAAHLQFCAWLDYMSKFPKNYSD 626
            G  AG  R+  +   +A     +  P     K+++ L+ GY G    G+Q+N G  TVEAELE A++  G + N NFG LQK+ WTRA RTD GVHA +NV + ++ V    D                                         +A+   +N  LP+ IR+    R T  F+AK +C+ RRY YLLPT  L      D      KA  A    + GD                  P + V                         AA+A+ SA+                      A        XXXXXXXXXXXXXXXXXXXXXXXXA              +  A        P+ +    ++ P V A VA +L  +R+T E++ +L++V+  F GT  YHNYT I+   T  SC R ++     +P+V      G+EWV +++ GQSF+L+QIRKMVA   +V R Q ++E M+RS  +  M L +AP  GLFL+K FF  Y  R          +GA D      +E  ++  ++ +  D      I   + + E     F +W+ +MS   + Y +
Sbjct:   92 GEHAGSYRATAEGAAVAASLDVEKAP-----KKRLALIFGYNGKRFSGLQINPGQRTVEAELELAMFKAGAVRNENFGNLQKLSWTRACRTDKGVHAATNVASARLIVKDDDD-----------------------------------------DALVERMNEALPEDIRMFGAVRATKTFHAKLSCSHRRYVYLLPTFCLM--PNADMTATWDKALAAHGLPALGDE-------------KFRMPESTVRRFTPDEKVTLTKTELREERKSAAEAAAAEASAV----------------------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASADEPAAADAEPGPKASA-VKATLLDPQRKITE-VAPPEVKAEVAAELAKYRVTEEQMDKLKDVVKAFEGTHRYHNYTQIKAVKTFASCLRYIKHMDVSDPYVPSEDPSGMEWVRITLIGQSFLLNQIRKMVAMMAEVTRGQCTMEKMERSFAEVKMDLDIAPPTGLFLEKPFFDEYNRRLADDRMPLGWHGALDGDFEGPKEFQSSMMKIGSAVDDFRTSNIEKFLYEEEKDDRYFVSWVGFMSWKNRPYEE 599          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351137 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJ34_9STRA0.000e+0100.00Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
D8LBC7_ECTSI1.520e-6732.91tRNA Pseudouridine Synthase n=2 Tax=Ectocarpus Tax... [more]
A0A067C2J0_SAPPC6.110e-4728.65PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A3R7IET8_9STRA4.050e-4526.51PseudoU_synth_1 domain-containing protein n=3 Tax=... [more]
A0A329SF03_9STRA4.320e-4227.08PseudoU_synth_1 domain-containing protein n=13 Tax... [more]
G4YFE8_PHYSP6.460e-4226.84PseudoU_synth_1 domain-containing protein n=5 Tax=... [more]
A0A225WAC7_9STRA1.110e-4127.56tRNA pseudouridine(38-40) synthase n=1 Tax=Phytoph... [more]
A0A2P4XQU8_9STRA2.080e-4127.73tRNA pseudouridine(38-40) synthase n=1 Tax=Phytoph... [more]
A0A2R6XX75_MARPO3.300e-4128.42PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
A0A7S1TVP3_9STRA2.020e-3930.69Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 461..557
e-value: 3.1E-6
score: 27.6
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 77..240
e-value: 7.7E-25
score: 89.3
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 428..627
e-value: 1.7E-42
score: 147.2
NoneNo IPR availablePIRSRPIRSR001430-1PIRSR001430-1coord: 135..162
e-value: 3.0E-4
score: 18.4
NoneNo IPR availablePIRSRPIRSR001430-2PIRSR001430-2coord: 204..255
e-value: 3.7E-7
score: 27.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..684
NoneNo IPR availablePANTHERPTHR11142:SF4TRNA PSEUDOURIDINE SYNTHASE Acoord: 77..623
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 77..623
IPR041708Pseudouridine synthase PUS1/ PUS2-likeCDDcd02568PseudoU_synth_PUS1_PUS2coord: 90..562
e-value: 7.83538E-66
score: 215.17
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 85..567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:293316..299536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351137mRNA_9769Tribonema minus UTEX_B_3156 mRNAContig_81 293316..299536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351137|estExt_Genemark1.C_Ctg_810049 ID=Trimin1|351137|estExt_Genemark1.C_Ctg_810049|Name=jgi.p|Trimin1|351137|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=685bp
MGKPRGNGRGPPGKGRYQWSSKKDKKDAHSREAHDPVDTPRDHRKQEWAK
PHPGSFAGELRSLLDPEPLAQLQAADGTPQGKKAKRKVGLVIGYCGTGMR
GMQLNNGALTVEAELEKALYLWGGISNANFGYLQKIGWTRAARTDGGVHA
VSNVVALKIAVDAPPDASAAAAGSDAQQEGTAQEGEKGESRKGVQAGGEA
EDEAAQHEAIRTGVNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLP
TCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAAAAAATSTSAAAPM
AVVEPAENPAAAAATSTSTDAAAPMEVTAASADQSALPGSSHGNGADKSG
LPEHGHGNGAGTNATAATAAAAESSAPAADSAAEQPQQGSGGAPDGDSSG
DEGDEGEREGAGEGEGEGGPEGEEKRWLSSPAVIARVAEKLRTFRITPEK
LARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFVRGGVE
WVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLA
PSKGLFLDKLFFSMYEERYGAADATSLKCREGSAAAARVTAMRDRIVSHI
VDGEAAHLQFCAWLDYMSKFPKNYSDTGGVDTSNFRQRKPTPAESAVRGG
GGSGGGGGSGARRKLQHRLPKERAARQVSVGARR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020094TruA/RsuA/RluB/E/F_N
IPR020095PsdUridine_synth_TruA_C
IPR001406PsdUridine_synth_TruA
IPR041708PUS1/PUS2-like
IPR020103PsdUridine_synth_cat_dom_sf