Trimin1|351134|estExt_Genemark1.C_Ctg_810044 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351134
Unique NameTrimin1|351134|estExt_Genemark1.C_Ctg_810044
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length571
Homology
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: A0A836C8P4_9STRA (Mitochondrial ribosomal death-associated protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P4_9STRA)

HSP 1 Score: 1119 bits (2894), Expect = 0.000e+0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0
Query:    1 MRHIVAIAGRRARARGAHTWIDHICSLQSLTIQPVAHALRQTACLSSLGGGGGRRPRFGGIGGQYGAGGSRAGRPGYDSTSRTPGDPDRVMDFMDDDFADIDDLDYGLVPDGAVAVPGGEESFFSGLKSKSARSRENRMQEMSGGVGRAEDAVGAAATNQAPAVQYVTSSDPDDVPRKQPTYFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPSAQRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIFHKFSFKPYG 570
            MRHIVAIAGRRARARGAHTWIDHICSLQSLTIQPVAHALRQTACLSSLGGGGGRRPRFGGIGGQYGAGGSRAGRPGYDSTSRTPGDPDRVMDFMDDDFADIDDLDYGLVPDGAVAVPGGEESFFSGLKSKSARSRENRMQEMSGGVGRAEDAVGAAATNQAPAVQYVTSSDPDDVPRKQPTYFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPSAQRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIFHKFSFKPYG
Sbjct:    1 MRHIVAIAGRRARARGAHTWIDHICSLQSLTIQPVAHALRQTACLSSLGGGGGRRPRFGGIGGQYGAGGSRAGRPGYDSTSRTPGDPDRVMDFMDDDFADIDDLDYGLVPDGAVAVPGGEESFFSGLKSKSARSRENRMQEMSGGVGRAEDAVGAAATNQAPAVQYVTSSDPDDVPRKQPTYFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPSAQRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIFHKFSFKPYG 570          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 5.050e-38
Identity = 112/338 (33.14%), Postives = 169/338 (50.00%), Query Frame = 0
Query:  241 QRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHY---RRDVDHLAA--------------FDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIF 561
            QR++LL G RG+GKS  L+HAV +AR+ GW+VLFVP+ R L++ GIYCQPS  + G+YD P+ + + +  L  AHG QL+ + ++D     R+    G+   L V DM   GL            A +  A     D++ ELL+T    V+LA+DEY+ELFQ S WHY   + +  HL A                  D+     +    +  + +R P E     A  + +  P  G  C P P  P  G V+ A +  YPP+++++ K+ +W  F+   G  A   ++   PY+  EF   L HYA  +      L   +VA+V  K+   P+ +F
Sbjct:  354 QRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQSMKRLKTLREAHGDQLKNISIKDPEVLGRHE---GAKTLLDVMDM---GL------------ADQEHAGTAHYDVMRELLATTEAKVMLAIDEYNELFQMSQWHYGDNKLEAPHLTATLPLLPPLVSTGTGLAFADDSVA-ALANPEVVAERKRTPAE-----AGGVAWMSPETGAACLPPP--PANGIVVCAVSGRYPPLKRLR-KNKKWVPFEATAGRLAQAVSIPVEPYTRREFLRVLKHYARVEEVVNEPLDTMEVAKVHAKSDSLPEHVF 664          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: A0A1V9YWF1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWF1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.200e-18
Identity = 81/256 (31.64%), Postives = 122/256 (47.66%), Query Frame = 0
Query:  182 YFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPS--AQRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAAD----GCFA--DIVEELLSTEAVPVLLAVDEYSELFQPSAWHYR------RDVDHLAAF-DIDD 422
            +F + +A +K  +PEG+   ++  F+       +  M R P   II  MK      P+   ++AF+L G RGTGKS A+   V+YAR NGW+VLF P+ R       Y   SA + G +D  + A  ++ QL+  HG QL EL++  A    RY     +    S ++  K  L         + + AEN        C A  D+  EL      PVL+A+DEY+  F+ + + Y       RD+  + A  DID+
Sbjct:   61 FFELSEAKIKQNYPEGLPRRIKEYFELTE--PSKQFMLRKPTLDIISVMKDFPNNWPANWPEKAFVLDGERGTGKSVAIMQIVNYARENGWIVLFAPQVRSWCYDAPYVTKSAHMQGKFDIDVVAMDVLKQLIEYHGSQLAELKL-SADYGDRYYPHTFAKKPKSTSEFDKAELT--------LLDVAENGLKDDLLSCTALVDLRAELAKVTKFPVLIAIDEYNSFFEKTVFGYEGVDVAPRDISFIDALADIDE 305          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: A0A024GQW6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQW6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 6.080e-17
Identity = 112/411 (27.25%), Postives = 167/411 (40.63%), Query Frame = 0
Query:  167 VTSSDPDDVPRKQPTYFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKR-AAAGDPSAQRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARY----------AAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIFHKFSF 566
            +T  DP+    K   +F +   D  + FPE V   L   FD         IM R P   I+  MK            AF+L G RGTGKS AL   VH+ARAN W+VL+VP AR       Y  PS  +   +D  L+ Q+M+    ++H  QL+++ +++  +   Y          A        L++AD+ + G+              E+ A     D+  EL   E  PVL+A+DE+S  +Q + + +  D   +   DI        V +A L V                      PDG L +      + G  I A T  YP   K+  K      F D   T           Y+++E  + L +Y A     E  +  A++A  ++ T  NP L+F + SF
Sbjct:   58 ITEVDPESDTNK---FFALTQEDRTSFFPEAVTKRLVRAFDLIGYDH---IMLRKPTADILSVMKNWQQPTQCDRPPAFILDGERGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTFIPSKFDIDLYGQQMLKVFASSHIKQLRQIPLRNEYKDRYYPTEKFSQRPKAGVKTDDVALTLADIVEIGI------------REEDLACVAVVDLRAELNKVEEFPVLIAIDEFSSWYQDTIFGF--DGKPVYPSDI-------SVVDALLDVG---------------------PDGYLKE---RKLKNGLFIGATTDRYPSKVKLWEKI----NFKDLRKTFG--------AYNSDEMESVLAYYTAVRFLVEE-MTQAEIAHFQLMTKSNPSLVFDRASF 404          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: W7TU02_9STRA (Mitochondrial 28s ribosomal s29-like protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU02_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 9.520e-17
Identity = 68/172 (39.53%), Postives = 84/172 (48.84%), Query Frame = 0
Query:  244 FLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGS-----SGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRR 410
            FLL G RG+GK+A L HAVHYAR +GWVV FVP A + L  G   +PS    G +DTP  AQ  + QL  AHG Q   L          Y A  G      SG  +  D+   GL            +    A  C  ++   L + +A PVL AVDE SE F PS++ Y R
Sbjct:  421 FLLSGPRGSGKTATLYHAVHYARRSGWVVFFVPSAFEYLHEGGLIRPSPFYRGYFDTPDLAQTTLRQLGEAHGHQFASLP---------YTAPRGLESLELSGEYTCWDLMALGL------------SQRKWATTCLLELKRALENQDAYPVLFAVDEVSEWFYPSSYFYAR 571          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: F0WVE2_9STRA (Uncharacterized protein AlNc14C294G10282 n=5 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVE2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.120e-16
Identity = 115/418 (27.51%), Postives = 169/418 (40.43%), Query Frame = 0
Query:  163 AVQYVTSSDPDDVPRKQPTYFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPSAQR-AFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDA-------TRRARYAAFAG---SSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVAPFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPV----RKIKGKSVRWPYFDDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVRIKTMLNPKLIFHKFS 565
            A   +T+ DP+    K   +F +   D  A FPE V   L   FD         IM R P   I+  MK       S +  A++L GARGTGKS AL   VH+ARAN W+VL+VP AR       Y  PS      +D  L+ Q+M+  L  +H  QL E+ +++        T +       G   +   L++AD+ + G+              E+ A     D+  EL   E  PVL+A+DE+S  +Q + + +  D   +   DI        V +A L V                      P+G L D      + G  I A T  YP       KI  K +R  +                  Y ++E  + L +Y A     E  +  A++A  ++ T  NP L+F + S
Sbjct:   57 ATHSITNFDPEADTNK---FFALTQEDRTAFFPEAVTKRLVRAFDLIGYNH---IMLRKPTAEILSVMKNWNQFTQSDRPPAYILDGARGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTITPSKFDIDLYGQQMLKMLAKSHHHQLLEIPLRNEYGDRYYPTEKFEQRPKTGVKTNDAPLTLADIVEVGI------------REEDLACPAVVDLRAELNQVEEFPVLIAIDEFSSWYQDTIFGF--DGKPVYPSDI-------SVVDALLDVG---------------------PNGYLED---RKLKNGLFIGATTDRYPSKVKLWEKINFKEIRKTF----------------GAYGSDEMESVLAYYTAIRFLVEE-MTPAEIAHFQLMTKSNPGLVFDRAS 406          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: A0A485KNI1_9STRA (Aste57867_9683 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNI1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.510e-15
Identity = 72/235 (30.64%), Postives = 112/235 (47.66%), Query Frame = 0
Query:  182 YFIIPDADLKARFPEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPS--AQRAFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADG----CFA--DIVEELLSTEAVPVLLAVDEYSELFQPSAWHY 408
            +F + D  +K  FP G+   L   F++  L  ++ +M R     I+  M       P+   ++AF+L G RGTGK+ AL  AV++AR NGW+VL VP AR+ +    Y   SA + G +D  +    ++ QL+  HG QL  L V+     A Y   + +    S ++  K  L         + +  EN        C A  D+  EL      PVL+A+DEY+  F+ + + Y
Sbjct:   65 FFELSDEQIKKNFPSGLPKRLNEMFEF--LEPKKHLMLRKSTASILDAMTDFPQKWPAHWPEKAFVLDGERGTGKTVALIQAVNFARENGWIVLHVPHAREWVNDAPYVTKSAHIEGKFDIDVVGMDILKQLIECHGEQLATLSVRG-DYGAHYYPRSFAKKPKSESEYDKSSLT--------LLDICENGLKDDLLTCKAVLDLKAELAQVTEFPVLIAIDEYNTWFRKTVFGY 288          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: A0A7S3ZXU8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXU8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.640e-15
Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 0
Query:  243 AFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHY 408
            A+LL GARG GKS AL   V  ARA GW+ LFV  AR +   G Y  PS   AG ++ P  ++ ++     AHG  L  ++  DA        + G++ R  V          G  +DD+      + A    AD+V+ L + +A PVL+AVDEYS LF+P+  +Y
Sbjct:  150 AYLLTGARGAGKSVALAQIVTQARARGWLCLFVARARDVGHHGDYVVPSPHHAGRFEEPSRSREVLEAFREAHGNDLATVKCTDAAAER----WGGATLREVV----------GAALDDK---KRGDEASTALADVVDGLRAHDAAPVLIAVDEYSALFEPATAYY 298          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: A0A7S2WS36_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS36_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.570e-15
Identity = 68/218 (31.19%), Postives = 103/218 (47.25%), Query Frame = 0
Query:  195 PEGVAGYLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPSAQRA----FLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHY 408
            PE   GYL       AL  R   +    A R +   +  AAG+  A        L    RG GKS +L HAVH+AR  GWVVLFV ++ + ++ G + QPS  V GM+D P  A  ++ +  A HG  +  L VQ    +A +      S   ++ ++ + GL            A ++AA    AD+  EL +   +P LLA+D    L++ + +H+
Sbjct:   75 PEDSMGYLTRSDGRLALMVRSPALQVIQALRAVSDKEGGAAGESEAAELPPYHVLTSDFRGVGKSLSLAHAVHWARDQGWVVLFVTDSLEFVQGGHWVQPSPYVEGMFDQPQVAHAVLEEFHAIHGEAVASLPVQTDEAKAHF------SSATTLGELMQAGL------------ADQDAASQAVADLRLELGAQTDLPFLLAIDNVDLLYRNTEYHH 274          
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Match: F0XXL1_AURAN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXL1_AURAN)

HSP 1 Score: 81.6 bits (200), Expect = 1.630e-12
Identity = 65/178 (36.52%), Postives = 88/178 (49.44%), Query Frame = 0
Query:  243 AFLLRGARGTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDTPLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAKPGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSELFQPSAWHYRRDVDHLAAFDI 420
            A+LL G RG GKS AL   V +ARANGW+ L+VP    +   G Y  PS   AGM++ P  ++ ++    AAHG QL  + V+D T   R+ A   +   L  A +AK          D + EA+   +D  F     EL      PVLLAVDEY+     + + Y  D   LA  D+
Sbjct:  122 AYLLTGPRGAGKSVALATVVSWARANGWLALYVPRGWDVANAGDYVVPSPHHAGMFEEPRGSRALLEAFDAAHGGQLAAVAVKDETVADRWGAA--TLRELLDAALAK----------DRLDEASTALSDLRF-----ELGRATEFPVLLAVDEYTSFLGRTDYFY--DHARLAPADL 280          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351134 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8P4_9STRA0.000e+0100.00Mitochondrial ribosomal death-associated protein 3... [more]
D8LJR3_ECTSI5.050e-3833.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9YWF1_9STRA2.200e-1831.64Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024GQW6_9STRA6.080e-1727.25Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
W7TU02_9STRA9.520e-1739.53Mitochondrial 28s ribosomal s29-like protein n=4 T... [more]
F0WVE2_9STRA4.120e-1627.51Uncharacterized protein AlNc14C294G10282 n=5 Tax=A... [more]
A0A485KNI1_9STRA3.510e-1530.64Aste57867_9683 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S3ZXU8_9STRA3.640e-1536.75Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2WS36_9STRA5.570e-1531.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0XXL1_AURAN1.630e-1236.52Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019368Ribosomal protein S23/S29, mitochondrialPFAMPF10236DAP3coord: 218..406
e-value: 9.2E-23
score: 80.9
IPR019368Ribosomal protein S23/S29, mitochondrialPANTHERPTHR12810MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29coord: 156..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:268179..271707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351134mRNA_9764Tribonema minus UTEX_B_3156 mRNAContig_81 268161..271707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351134|estExt_Genemark1.C_Ctg_810044 ID=Trimin1|351134|estExt_Genemark1.C_Ctg_810044|Name=jgi.p|Trimin1|351134|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=571bp
MRHIVAIAGRRARARGAHTWIDHICSLQSLTIQPVAHALRQTACLSSLGG
GGGRRPRFGGIGGQYGAGGSRAGRPGYDSTSRTPGDPDRVMDFMDDDFAD
IDDLDYGLVPDGAVAVPGGEESFFSGLKSKSARSRENRMQEMSGGVGRAE
DAVGAAATNQAPAVQYVTSSDPDDVPRKQPTYFIIPDADLKARFPEGVAG
YLRHEFDYAALRDRRAIMHRAPARRIIGHMKRAAAGDPSAQRAFLLRGAR
GTGKSAALNHAVHYARANGWVVLFVPEARKLLRTGIYCQPSARVAGMYDT
PLHAQRMIAQLLAAHGPQLQELEVQDATRRARYAAFAGSSGRLSVADMAK
PGLPAGKGVDDEVFEAAENAADGCFADIVEELLSTEAVPVLLAVDEYSEL
FQPSAWHYRRDVDHLAAFDIDDEDYEDKVREARLHVQLERIPGEKLTVVA
PFMPFRPPPDGGLCDPAPFTPRRGAVIAAETLHYPPVRKIKGKSVRWPYF
DDFVGTSADPWTVETAPYSAEEFAAALGHYAACDMYDERALGDADVARVR
IKTMLNPKLIFHKFSFKPYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019368Ribosomal_S23/S29_mit