Trimin1|351103|estExt_Genemark1.C_Ctg_800064 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351103
Unique NameTrimin1|351103|estExt_Genemark1.C_Ctg_800064
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length252
Homology
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A835YTQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTQ8_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 2.110e-146
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSIADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERWYRCRWTTEPDAAYREKSCIRYGNLVDLLGHLEVLQWARANGCPWDKSTCTLAASG 205
            MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSIADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERWYRCRWTTEPDAAYREKSCIRYGNLVDLLGHLEVLQWARANGCPWDKSTCTLAASG
Sbjct:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSIADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERWYRCRWTTEPDAAYREKSCIRYGNLVDLLGHLEVLQWARANGCPWDKSTCTLAASG 205          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A835YMP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP6_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.700e-65
Identity = 125/197 (63.45%), Postives = 131/197 (66.50%), Query Frame = 0
Query:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSIA----------------------------DEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERWYRCRWTTEPDAAYREKSCI 169
            MAAAVTREAAEVW L RRRPQELRGVRV+PGIGSAGRCGQPEEAGQPHGAVALAAVSIA                            DEVGGLIAAHDG MV VVESLG+        +     G   GY                YNDLVVVDLRLQFGWRSSPGWWSLAGGAIE WYRCRWTTEPDAAYRE++ +
Sbjct:    1 MAAAVTREAAEVWALMRRRPQELRGVRVQPGIGSAGRCGQPEEAGQPHGAVALAAVSIAGLTAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIAAHDGYMVNVVESLGMDVKSAFRQLALDVRGPLLGYR---------------YNDLVVVDLRLQFGWRSSPGWWSLAGGAIEWWYRCRWTTEPDAAYRERAAL 182          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.730e-41
Identity = 96/137 (70.07%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEE---AGQPHGAVALAA----------------VSIADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGEGYPRLQELLDVVAHGVPV 118
            MAAAVTR AAEVWGLTRRRPQELRGV V+PGIG+AG  GQPEE   +G P  A  + A                 S+ADEVGGLI AHDGNMVKVVESLGVGNDHMV AV ASFFGR EG PRL+ELLDVVAHGVPV
Sbjct:  217 MAAAVTRVAAEVWGLTRRRPQELRGVWVQPGIGNAGHRGQPEEESRSGVPGLAAEMRARWRCYQAMAGKSLLPLSSLADEVGGLIVAHDGNMVKVVESLGVGNDHMVHAVTASFFGRVEGCPRLEELLDVVAHGVPV 353          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A836CLL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.460e-22
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0
Query:    1 MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGAVALAAVSIADEV 62
            MAAAVTREAAEVWGLTRRRPQELRGVRV+P  GSAGRCGQPEE GQPHGAVALAAVSIA ++
Sbjct:  390 MAAAVTREAAEVWGLTRRRPQELRGVRVQPDRGSAGRCGQPEETGQPHGAVALAAVSIAGQI 451          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A835YZC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.480e-10
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query:  119 YNDLVVVDLRLQFGWRSSPGWWSLAGGAI 147
            YNDLVVVDLRLQFGWRSSPGWWSLAGGAI
Sbjct:  184 YNDLVVVDLRLQFGWRSSPGWWSLAGGAI 212          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A835ZCS3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCS3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.170e-8
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 0
Query:   87 MVLAVIASFFGRGEGYPRLQELLDVVAHGVPV 118
            MVLA IASFFGRGEGY RLQELLDVVAHGVPV
Sbjct:    1 MVLAFIASFFGRGEGYRRLQELLDVVAHGVPV 32          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A836CBS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.500e-5
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  158 EPDAAYREKSCIRYGNL--VDLLGHLEVLQWARANGCPWDKSTCTLAAS 204
            +P+ A  ++SCI YG+L  + L G LE LQWA ANGCPWD+ TC+ AA+
Sbjct:  566 DPEVA--QESCIWYGDLDGLQLGGQLEALQWACANGCPWDERTCSSAAA 612          
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Match: A0A811BSI5_9VIRU (Uncharacterized protein n=1 Tax=Pandoravirus japonicus TaxID=2823154 RepID=A0A811BSI5_9VIRU)

HSP 1 Score: 54.3 bits (129), Expect = 7.710e-5
Identity = 27/58 (46.55%), Postives = 32/58 (55.17%), Query Frame = 0
Query:  149 RWYRCRWTTEPDA---AYREKSCIRYGNLVDLLGHLEVLQWARANGCPWDKSTCTLAA 203
            RW   RW +   A   A R     RY   +   GHL +LQWARA GCPWD+ TC+ AA
Sbjct:   66 RWVNRRWRSLSRASTLAGRRARGTRYAAALGRRGHLAMLQWARAGGCPWDERTCSQAA 123          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351103 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835YTQ8_9STRA2.110e-146100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMP6_9STRA1.700e-6563.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCV7_9STRA2.730e-4170.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLL4_9STRA1.460e-2288.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZC0_9STRA6.480e-10100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZCS3_9STRA4.170e-893.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBS1_9STRA1.500e-555.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A811BSI5_9VIRU7.710e-546.55Uncharacterized protein n=1 Tax=Pandoravirus japon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 178..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_80contigContig_80:615291..620895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351103mRNA_11774Tribonema minus UTEX_B_3156 mRNAContig_80 615066..620895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351103|estExt_Genemark1.C_Ctg_800064 ID=Trimin1|351103|estExt_Genemark1.C_Ctg_800064|Name=jgi.p|Trimin1|351103|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=252bp
MAAAVTREAAEVWGLTRRRPQELRGVRVRPGIGSAGRCGQPEEAGQPHGA
VALAAVSIADEVGGLIAAHDGNMVKVVESLGVGNDHMVLAVIASFFGRGE
GYPRLQELLDVVAHGVPVYNDLVVVDLRLQFGWRSSPGWWSLAGGAIERW
YRCRWTTEPDAAYREKSCIRYGNLVDLLGHLEVLQWARANGCPWDKSTCT
LAASGGHLETLQWARVNGCPWDSETLETARFSKRHEVVRWALANGCPQQD
A*
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