Trimin1|351102|estExt_Genemark1.C_Ctg_800063 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351102
Unique Name	Trimin1\|351102\|estExt_Genemark1.C_Ctg_800063
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	365

Homology

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BLAST of jgi.p|Trimin1|351102 vs. uniprot
Match: A0A835YJA4_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA4_9STRA)

HSP 1 Score: 674 bits (1740), Expect = 4.100e-244
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0

Query:    1 MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALQDKIGAMAGSMQDVMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPIKLTGGQRASKLHDVLARTAVYVDQKPNAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVPGNVVPGPCKYRHSDT 364
            MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALQDKIGAMAGSMQDVMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPIKLTGGQRASKLHDVLARTAVYVDQKPNAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVPGNVVPGPCKYRHSDT
Sbjct:    1 MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALQDKIGAMAGSMQDVMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPIKLTGGQRASKLHDVLARTAVYVDQKPNAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVPGNVVPGPCKYRHSDT 364

[Close]

BLAST of jgi.p|Trimin1|351102 vs. uniprot
Match: A0A836CLL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL4_9STRA)

HSP 1 Score: 638 bits (1646), Expect = 5.860e-228
Identity = 351/376 (93.35%), Postives = 357/376 (94.95%), Query Frame = 0

Query:    1 MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALQDKIGAMAGSMQDVMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPIKLTGGQRASKLHDVLARTAVYVDQK------------PNAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVPGNVVPGPCKYRHSDT 364
            MSGESGESAEQATENPVDISDRLERF+NSVEQRLGAL+DKIGAMAGSMQDV+AQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGV TTLPIKLTGGQR SKLHDVLARTAVYVDQK            P AFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTF+SEM VCEVMLAKFEMLVVHQEGVTISDADLAAIQGAI SDLDEWTSNLDA+STSLLQHH+LAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNP P NVVPGPCKYRHSDT
Sbjct:    1 MSGESGESAEQATENPVDISDRLERFINSVEQRLGALEDKIGAMAGSMQDVVAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVLTTLPIKLTGGQRVSKLHDVLARTAVYVDQKVANMLWDVSNLQPIAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFVSEMAVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIQSDLDEWTSNLDAMSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPYGVCWVWWRHVKEQNPAPCNVVPGPCKYRHSDT 376

[Close]

BLAST of jgi.p|Trimin1|351102 vs. uniprot
Match: A0A836CHX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX2_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 6.040e-147
Identity = 235/243 (96.71%), Postives = 236/243 (97.12%), Query Frame = 0

Query:  126 PNAFSFRDPATRSGKATARSYQALYTGFKLMRAAL--AELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCP--YGVCWVWWRHVKEQNPVPGNVVPGPCKYRHSDT 364
            P AFSFRDPATRSGKATARSYQALYTGFKLMRAAL  AELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHH+LAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCP  YG CWVWWRHVKEQNPVP NVVPGPCKYRHSDT
Sbjct:   38 PIAFSFRDPATRSGKATARSYQALYTGFKLMRAALRLAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHRLAPPFGSGEALDVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSGXXXXXXXXXXXXXXXXXGTRSQPRGAPANCPKAYGGCWVWWRHVKEQNPVPCNVVPGPCKYRHSDT 280

[Close]

BLAST of jgi.p|Trimin1|351102 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA)

HSP 1 Score: 311 bits (797), Expect = 3.470e-92
Identity = 177/216 (81.94%), Postives = 182/216 (84.26%), Query Frame = 0

Query:   44 MAGSMQDVMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPIKLTGGQRASKLHDVLARTAVYVDQKPNAFSFRDPATRSGKATARSYQALYTGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEALDVPDIPTVA 259
            MAGS+QDV+AQEVQLQVEESSRSTSSEDTRERK LMENEAYR HLLLRCGVPTTLPIKLTGGQR SKLHDVLARTAV                  GKATARSYQALY G KLMRA   ELIGLGLTELPQGSRTFMS+MEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDL    +  DALST LLQHH+L PPFGSGEALDVPDIPTVA
Sbjct:    1 MAGSLQDVVAQEVQLQVEESSRSTSSEDTRERKLLMENEAYRCHLLLRCGVPTTLPIKLTGGQRVSKLHDVLARTAV------------------GKATARSYQALYKGVKLMRA---ELIGLGLTELPQGSRTFMSKMEVCEVMLAKFEMLVVHQEGVTISDADLAAIQGAIHSDLTSGPAT-DALSTILLQHHRLPPPFGSGEALDVPDIPTVA 194

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351102 vs. uniprot

BLAST of jgi.p|Trimin1|351102 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835YJA4_9STRA	4.100e-244	100.00	Uncharacterized protein n=4 Tax=Tribonema minus Ta...	[more]
A0A836CLL4_9STRA	5.860e-228	93.35	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHX2_9STRA	6.040e-147	96.71	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCV7_9STRA	3.470e-92	81.94	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_80	contig	Contig_80:614119..615254 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351102	mRNA_11773	Tribonema minus UTEX_B_3156	mRNA	Contig_80 614119..615341 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351102|estExt_Genemark1.C_Ctg_800063 ID=Trimin1|351102|estExt_Genemark1.C_Ctg_800063|Name=jgi.p|Trimin1|351102|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=365bp
MSGESGESAEQATENPVDISDRLERFMNSVEQRLGALQDKIGAMAGSMQD
VMAQEVQLQVEESSRSTSSEDTRERKSLMENEAYRRHLLLRCGVPTTLPI
KLTGGQRASKLHDVLARTAVYVDQKPNAFSFRDPATRSGKATARSYQALY
TGFKLMRAALAELIGLGLTELPQGSRTFMSEMEVCEVMLAKFEMLVVHQE
GVTISDADLAAIQGAIHSDLDEWTSNLDALSTSLLQHHQLAPPFGSGEAL
DVPDIPTVAWTNAARALEVNGDIAARAVAAARKRKYDGAFRGGGRPVGSG
GGGAGAGGGAGAAAGAGGTRSQPRGAPANCPYGVCWVWWRHVKEQNPVPG
NVVPGPCKYRHSDT*