Trimin1|351062|estExt_Genemark1.C_Ctg_790071 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351062
Unique NameTrimin1|351062|estExt_Genemark1.C_Ctg_790071
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length236
Homology
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YU92_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU92_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 9.930e-144
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query:    1 MADAGLMAEAVVGLVAEGRFAFEESSLGGGGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEAAELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGSSSDAQLPPLPQGLQELRVNGV 235
            MADAGLMAEAVVGLVAEGRFAFEESSLGGGGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEAAELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGSSSDAQLPPLPQGLQELRVNGV
Sbjct:    1 MADAGLMAEAVVGLVAEGRFAFEESSLGGGGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEAAELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGSSSDAQLPPLPQGLQELRVNGV 235          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YJU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.170e-54
Identity = 116/217 (53.46%), Postives = 132/217 (60.83%), Query Frame = 0
Query:   27 LGGGGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEA-AELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLW-------GHKNEEGSSSDAQLPPLPQGLQELRVNGV 235
            L GG G TG N     QFP+ P+SLITLELESLY A D  C + PML LPP I+HLRITSE A    + F G+LGPLPPSLRTL  DH E  A LP                             ELR+W T QR+CDALA++  GNL+RLTL GP+   SLR AIGPLP TLTH+ CWL          ++E G SSDAQLP LPQGLQEL V+GV
Sbjct: 1184 LNGGRGDTGANGGRVNQFPVLPDSLITLELESLYSA-DHGC-QHPMLTLPPNIQHLRITSERACEPELAFSGNLGPLPPSLRTLVFDHPEGCAALPPLPLGLRELTLGEYEHKLPALLPPSLEALELRNWGTQQRLCDALASSCSGNLRRLTLIGPMADASLRSAIGPLPATLTHWVCWLVPADVEDEDEQDEGGYSSDAQLPVLPQGLQELCVDGV 1398          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YLE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.590e-50
Identity = 123/215 (57.21%), Postives = 132/215 (61.40%), Query Frame = 0
Query:   30 GGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEA-AELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGS--------SSDAQLPPLPQGLQELRVNGV 235
            G GGT  N     QFP+ P+SLIT ELE LY A      + PML LPP I+HLR+T E        F G LGPLPPSLRTL  DH E  A LPXXXXXXX             XXXXXXXXX    W   QRV DALATA GGNLQRL+L G  PGGSLR AIGPLP TLTHFTCWL     E+          SS+AQLP LPQG+QEL V GV
Sbjct:    4 GRGGTDANGGRINQFPVLPDSLITPELECLYSADHGR--QHPMLTLPPNIQHLRVTCERVGEPEFAFSGPLGPLPPSLRTLVFDHPEGCAALPXXXXXXXELTLGEYEHALPAXXXXXXXXXXXXXWSEQQRVRDALATASGGNLQRLSLLGWSPGGSLRSAIGPLPATLTHFTCWLVPINVEDEEXXXXXDSYSSNAQLPVLPQGVQELCVKGV 216          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YLH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH6_9STRA)

HSP 1 Score: 177 bits (449), Expect = 9.420e-48
Identity = 108/223 (48.43%), Postives = 129/223 (57.85%), Query Frame = 0
Query:   20 FAFEESSLGGGGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEA-AELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGS------SSDAQLPPLPQGLQELRVNGV 235
             ++ ESS  GG G    N     QFP+FP+SLITLELESLY A D D  + P+L LPP I+ + IT E +++  + F+G LGPLPPSLRTL ++H +  A LP                             EL+ W   Q +CDALAT  GGN QRLTLAG    G LR +IGPLP TLTHFTCWL G +           SSDAQLPPLP GLQEL VNG+
Sbjct:   94 LSWRESS--GGRGSNEGNGGRVNQFPVFPDSLITLELESLYSA-DHDF-QHPVLTLPPNIQQVSITCERSDQPELAFNGPLGPLPPSLRTLVIEHPDGCAALPPLPLGLRELTLSEYEHKLQAPLPPSLEALELQGWGKQQSLCDALATFGGGNFQRLTLAGRSQRGGLRSSIGPLPATLTHFTCWLGGGEXXXXXXXXXXXSSDAQLPPLPLGLQELCVNGI 312          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835Z8S2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S2_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.120e-44
Identity = 105/219 (47.95%), Postives = 119/219 (54.34%), Query Frame = 0
Query:   22 FEESSLGGGGGGTGVNDSSKTQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEA-AELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWL-WGHKNEE---GSSSDAQLPPLPQGLQELRVNGV 235
              E  L GGGGGTG N    TQFP+ P+SLITLELESLY     D  + P+L LPP I+ LR+T E A+   + F G LG LPPSLRTL  DH +  A LP                              LR            A  +G NLQRL+L G  PGGSL  AIGPLP TLTHFTCWL  G + +E   G SS AQLP LPQGLQEL  NG+
Sbjct:  203 LSERVLNGGGGGTGANGGRITQFPVLPDSLITLELESLYSG--GDGSQHPVLTLPPNIQRLRVTCEQASEPDLMFSGPLGLLPPSLRTLVFDHPDGCAALPPLPPG-------------------------LR------------ALTLGNNLQRLSLMGWSPGGSLHSAIGPLPATLTHFTCWLDRGQEEDEDGDGYSSHAQLPLLPQGLQELYANGI 382          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YJT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT8_9STRA)

HSP 1 Score: 158 bits (400), Expect = 7.240e-42
Identity = 102/205 (49.76%), Postives = 117/205 (57.07%), Query Frame = 0
Query:   42 TQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDH-YEAAELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGSSS----------DAQLPPLPQGLQELRVNGV 235
            TQF  FP+SL+TLELE L  A   D  E P+L LPP ++HLRIT E+ +   + F G LGPLPPSLRTL +DH Y    LP XXXXX                       ELRD    QR+ +ALA+     LQRLTL     GGSL  AIGPLP  LTHFTCWL G  ++               +AQLPPLPQGLQELRVNGV
Sbjct:  283 TQFSSFPDSLVTLELELLNSA--DDRLEHPLLTLPPNLQHLRITCEEESDTRIMFHGPLGPLPPSLRTLLIDHHYGCMALPPXXXXXREVTLGEYEHALPAPLPPCLEALELRDCRKRQRLREALASTDSSRLQRLTLVQKSAGGSLCSAIGPLPAALTHFTCWLNGSGDKXXXXXXXXXXXXXXRNAQLPPLPQGLQELRVNGV 485          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YJH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH5_9STRA)

HSP 1 Score: 154 bits (390), Expect = 5.360e-41
Identity = 92/174 (52.87%), Postives = 101/174 (58.05%), Query Frame = 0
Query:   71 PMLMLPPRIEHLRITSEDANRDYVTFDGSLGPLPPSLRTLFVDHYEAAELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTHFTCWLWGHKNEEGSS---------SDAQLPPLPQGLQELRVNGV 235
            P+L LPP IEHLRIT E    +Y  FDGSLGPLP SLRT+ +DH EAA L                              ELRDW   QR+ DALAT+ GG LQRLTL G  P GSLR AIGPLP  LTHFTCWL G ++              SDAQLP LPQGLQELR+NGV
Sbjct:  251 PVLALPPHIEHLRITCEPDQEEY-GFDGSLGPLPLSLRTMVIDHPEAAVL--------------------QPLPPCLEALELRDWRKRQRLYDALATSGGGTLQRLTLTGRSPRGSLRSAIGPLPAALTHFTCWLEGGEDXXXXXXXXXXXXXXSDAQLPLLPQGLQELRINGV 403          
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Match: A0A835YK84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK84_9STRA)

HSP 1 Score: 102 bits (255), Expect = 7.480e-23
Identity = 94/152 (61.84%), Postives = 104/152 (68.42%), Query Frame = 0
Query:   28 GGGGGGTGVNDSSK-TQFPLFPESLITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSE-DANRDYVTFDGSLGPLPPSLRTLFVDHYEAAELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRDWCTPQRVCDALATAIGGN-LQRL 176
            G  GG T   D+S   QFP  P+SL+TLELESL         + P+L L PR+EHLR+ S+ D   DY  FDGSLG LPPSLRTL +DH EAA LP XXXXXXXXXXXXXXXXXXXXXXXX    ELR W   QR+ DALAT  GGN LQ L
Sbjct:   68 GSNGGDTSPADASHINQFPSLPDSLVTLELESLISTNRFAVLQHPVLTLTPRMEHLRVVSDTDGQPDY-EFDGSLGSLPPSLRTLLIDHPEAAALPLXXXXXXXXXXXXXXXXXXXXXXXXLEALELRSWRQRQRLWDALATCGGGNGLQEL 218          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351062 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835YU92_9STRA9.930e-144100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJU1_9STRA1.170e-5453.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLE8_9STRA3.590e-5057.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLH6_9STRA9.420e-4848.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8S2_9STRA1.120e-4447.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJT8_9STRA7.240e-4249.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJH5_9STRA5.360e-4152.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK84_9STRA7.480e-2361.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 35..159
e-value: 7.1E-6
score: 26.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_79contigContig_79:560571..562152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351062mRNA_11231Tribonema minus UTEX_B_3156 mRNAContig_79 560571..562274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351062|estExt_Genemark1.C_Ctg_790071 ID=Trimin1|351062|estExt_Genemark1.C_Ctg_790071|Name=jgi.p|Trimin1|351062|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=236bp
MADAGLMAEAVVGLVAEGRFAFEESSLGGGGGGTGVNDSSKTQFPLFPES
LITLELESLYFAIDSDCDEQPMLMLPPRIEHLRITSEDANRDYVTFDGSL
GPLPPSLRTLFVDHYEAAELPPLPPGLRELTLGEYDHALQAPLPPCLEAL
ELRDWCTPQRVCDALATAIGGNLQRLTLAGPIPGGSLRLAIGPLPTTLTH
FTCWLWGHKNEEGSSSDAQLPPLPQGLQELRVNGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf