Trimin1|351053|estExt_Genemark1.C_Ctg_790042 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351053
Unique NameTrimin1|351053|estExt_Genemark1.C_Ctg_790042
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length731
Homology
BLAST of jgi.p|Trimin1|351053 vs. uniprot
Match: A0A835ZGC3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC3_9STRA)

HSP 1 Score: 741 bits (1914), Expect = 7.520e-255
Identity = 654/755 (86.62%), Postives = 655/755 (86.75%), Query Frame = 0
Query:    1 MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVLHSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIM--LQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASLFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTA-----------------------------VLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSHGXXXSIARGGGMRG--------GXXXXXXXXXGAAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVGXXXXXXXXXXXXXXXXXXDGAGAXXXXXXXXXXXXXXXXXXXXXX-----------VGGAGALAANLGSEFGVDSIGGTFGVDGSXXGSSTRSGG 705
            MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVLHSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIM  LQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFAS+FPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTA                             VLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHAN VARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDS              XXXXXXX         XXXXXX XXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXX HGXX SIARGGGMRG         XXXXXXXXX AAIP XXXXXXXXXXXXXXXXXXXX    XXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGV  XXXXXXXXXXXXXXXXXDGAGA XXXXXXXXXXXXXXXXXXXXX           VGGAGALAANLGSEFGVD IG        XXGSSTRSGG
Sbjct:  163 MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVLHSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAGDGTELCGHYGADGDGSLMAGTGAAAAAAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHGAARNRHXXXXXXXAGVSACGGGXXXXXXLXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHGXXGSIARGGGMRGRXXXXXXXXXXXXXXXXXXAAIPGXXXXXXXXXXXXXXXXXXXXVHSGXXXXXXXXLATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVSFXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIGXXXXXXXXXXGSSTRSGG 917          
BLAST of jgi.p|Trimin1|351053 vs. uniprot
Match: A0A835YUM3_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM3_9STRA)

HSP 1 Score: 666 bits (1718), Expect = 5.480e-225
Identity = 640/765 (83.66%), Postives = 645/765 (84.31%), Query Frame = 0
Query:    1 MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVLHSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIMLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASLFPSGVPSGQQEGDILETLRCAL------------------------WAKD-KGEPE------------------------GPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSHGXXXSIARGGGMRGGXXXXXXXXXGAAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVGXXXXXXXXXXXXXXXXXXDGAGAXXXXXXXXXXXXXXXXXXXXXX-----------VGGAGALAANLGSEFGVDSIGGTFGVDGSXXGSSTRSGG 705
            MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVLHSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIMLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLP      P       ++  +  + RCA+                        W  D K  P                         G  AA   AVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQL PSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDS             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSHGXXXSIARGGGMRGGXXXXXXXXXGAAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXX SPAFLGV XXXXXXXXXXXXXXXXXXDGAGAXXXXXXXXXXXXXXXXXXXXXX           VGGAGALAANLGSEFGVD I         XXGSSTRSGG
Sbjct:  182 MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVLHSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIMLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPSLQVCSPLVYLRDSRK--VTSSKRCAVHSGPRTRASQRALQQQAKQQLSTVWFGDCKQRPHRMRSCDGTELCGHYGADGDGSLMAGTGAAAAAAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLAPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHAAARNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSHGXXXSIARGGGMRGGXXXXXXXXXGAAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPAFLGVXXXXXXXXXXXXXXXXXXXDGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIXXXXXXXXXXXGSSTRSGG 944          
BLAST of jgi.p|Trimin1|351053 vs. uniprot
Match: A0A835Z7Q8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q8_9STRA)

HSP 1 Score: 645 bits (1665), Expect = 1.050e-220
Identity = 626/685 (91.39%), Postives = 627/685 (91.53%), Query Frame = 0
Query:   59 KQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIM--LQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASLFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSHGXXXSIARGGGMRGGXXXXXXXXXGAAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVGXXXXXXXXXXXXXXXXXXDGAGAXXXXXXXXXXXXXXXXXXXXXX-----------VGGAGALAANLGSEFGVDSIGGTFGVDGSXXGSSTRSGGTGLAAAXXXXXXSIPSALAMLAVAA 730
            KQRNEYAYRSYTNVAMPGFL WLSEAANDNPPSWITREIM  LQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFAS+FPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHAN VARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDS              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXX H XXXSIARGGGMRG XXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGV XXXXXXXXXXXXXXXXXXDGAGA XXXXXXXXXXXXXXXXXXXXX           VGGAGALAANLGSEFGVD IGGTFGV   XX              XXXXXX IPSALAMLAVAA
Sbjct:   76 KQRNEYAYRSYTNVAMPGFLMWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXSIARGGGMRGXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVXXXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIGGTFGVXXXXXXXXXXXXXXXXXXXXXXXXXXIPSALAMLAVAA 758          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351053 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZGC3_9STRA7.520e-25586.62Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YUM3_9STRA5.480e-22583.66Uncharacterized protein n=4 Tax=Tribonema minus Ta... [more]
A0A835Z7Q8_9STRA1.050e-22091.39Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 404..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_79contigContig_79:396608..399579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351053mRNA_11204Tribonema minus UTEX_B_3156 mRNAContig_79 396571..399861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351053|estExt_Genemark1.C_Ctg_790042 ID=Trimin1|351053|estExt_Genemark1.C_Ctg_790042|Name=jgi.p|Trimin1|351053|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=731bp
MTSNTVESLGFTITAGVEWALKMLYAQKASAETLKIFQTVPIAYAASAVL
HSGRTLAQKQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIMLQ
TTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFAS
LFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATT
AGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTC
AAAAGDTTGGNDSDGASIISGGTNDASSSLSSAPVIKRCGLTSRRRLKQQ
QQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAV
ARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKD
DSSDGDSSSCSSGHAAARNRHSSGSGSSAGVSACGGGRGGSGDLLGSSAG
GGDNGGGSSALNIGGASALMDSFGGAQRSGDGANAAAPADGFGGGGAGNG
FGGGGAGNGFGGDGSHGGGGSIARGGGMRGGGGGGGGGGAGAAIPGGGFG
SSSSRGGGGSIAHGSGVHSGAGAGSGAGLATFGDGSGGGSSGDGNGALGY
GVRSGGGSGGGSGSPAFLGVGFGGDSSGGGNGALGNGVRDGAGALGYGVR
DGAGALGYGVRDGAGGVGGAGALAANLGSEFGVDSIGGTFGVDGSGGGSS
TRSGGTGLAAAAAAAAASIPSALAMLAVAA*
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