Trimin1|351027|estExt_Genemark1.C_Ctg_780050 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351027
Unique NameTrimin1|351027|estExt_Genemark1.C_Ctg_780050
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length469
Homology
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A835YJN1_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN1_9STRA)

HSP 1 Score: 719 bits (1855), Expect = 3.700e-258
Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0
Query:    1 MSTASASSDGGGGQAAYVLRPLKKRPLSDNAPPGSSARSTASTCSYXXXXXXXGSGDDGNSTDDDARHQQHEQGACSKRTKLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAHLSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLRAILQQRAASPSXXXXXXXXXXXXPLPPHTAEADSKPARMAPSPTPQQAYAGSRSPCRKQMAIARPASAASSGASPSAACLAPPLVPLAVLPVAPSAATKLPMVTAQAPAGAEYGSVPAHMYAHYPIYPPHAAAYVAAAGALLPGIYGXXXXXXXXXXALPAHVLQAHAFDMQGRYAAXXXXXXXXXXXXXXXXXXXXXXXXXHPYAAAYYQYHQ 468
            MSTASASSDGGGGQAAYVLRPLKKRPLSDNAPPGSSARSTASTCSYXXXXXXXGSGDDGNSTDDDARHQQHEQGACSKRTKLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAHLSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLRAILQQRAASPSXXXXXXXXXXXXPLPPHTAEADSKPARMAPSPTPQQAYAGSRSPCRKQMAIARPASAASSGASPSAACLAPPLVPLAVLPVAPSAATKLPMVTAQAPAGAEYGSVPAHMYAHYPIYPPHAAAYVAAAGALLPGIYGXXXXXXXXXXALPAHVLQAHAFDMQGRYAAXXXXXXXXXXXXXXXXXXXXXXXXXHPYAAAYYQYHQ
Sbjct:    1 MSTASASSDGGGGQAAYVLRPLKKRPLSDNAPPGSSARSTASTCSYXXXXXXXGSGDDGNSTDDDARHQQHEQGACSKRTKLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAHLSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLRAILQQRAASPSXXXXXXXXXXXXPLPPHTAEADSKPARMAPSPTPQQAYAGSRSPCRKQMAIARPASAASSGASPSAACLAPPLVPLAVLPVAPSAATKLPMVTAQAPAGAEYGSVPAHMYAHYPIYPPHAAAYVAAAGALLPGIYGXXXXXXXXXXALPAHVLQAHAFDMQGRYAAXXXXXXXXXXXXXXXXXXXXXXXXXHPYAAAYYQYHQ 468          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S2REX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REX0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.180e-15
Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 0
Query:   74 GACSKRTKLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCA---GTDVDSXXXXXXDEVELLDKLPAHLSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLRAIL 257
            G   KR +LS +++L  SRERNR+HA+KTRQRKK ++  LQAR  +LK E   L++ VDER TA +LL +    E   G +  S      S+  +   +A  A   G D D+      D+ E   + P   +    + TP ERE IRRERNR+HAKRTR RKKL  ++ ER+I V E+   +LR  L
Sbjct:  183 GDSKKRRRLSSEERLQRSRERNRMHAKKTRQRKKMQIEALQARIDELKTEFLGLRQIVDERYTAYILLVMSGAAENGSGASFLSSSAEGPSTLGSKFTSASLAQIIGRDPDAE-----DDKE---EAPQKRTRRRGKYTPAEREHIRRERNRMHAKRTRDRKKLFLEESERKIAVMEEENAKLRDFL 361          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S2RAP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAP5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.250e-11
Identity = 75/194 (38.66%), Postives = 101/194 (52.06%), Query Frame = 0
Query:   74 GACSKRTKLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEG------TDG-------------ETGASVRRGSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAHLSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEK 248
            G  SKR KL+ + +L  SRERNR+HA+KTRQRKK ++  LQ    QLK E   L   +DER  A  LL + +  EG      TDG             E G+S  +   +   ++   AG  G  ++       +  E+   L   +  D S+ TP+E EQIRRERNR+HAKRTR RKK   +D++  I   EK
Sbjct:  305 GDPSKRIKLTSEQRLERSRERNRIHARKTRQRKKQQMERLQDTVDQLKLENVALTRELDERIAAIKLLVMRSPDEGDDLLAITDGGYRDSEPSADSLSEGGSSTSKNDHTDTGSS--MAGDEGIQLNGMILGVAEMAEMDIDLEL-MKKDRSQCTPEELEQIRRERNRMHAKRTRVRKKAQLEDIQETIASLEK 495          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S4AQ14_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQ14_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.970e-10
Identity = 64/196 (32.65%), Postives = 93/196 (47.45%), Query Frame = 0
Query:   81 KLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPA-----------H--------------------------LSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDL 239
            K +H +++  SRERNR+HA+KTRQRKK +L  LQ +A QLK EQ +L+  ++E+ TA++L  L +  +G+        R                    V++      +E+    KLPA           H                          L  D S+ TP E +QIRRERNR+HAKRTR RK+L  +++
Sbjct:   51 KRNHGERMKRSRERNRIHARKTRQRKKEQLQSLQTKAEQLKGEQINLKLCINEKNTANILCCLLSNNQGSQSSCAEDPR--------------------VEALLTRPEEEIPDPSKLPALQPLILPSGAQHSKRSNNNINDNLQSQQPPNDGIDYELLGKDRSKCTPAELDQIRRERNRMHAKRTRDRKRLFMEEM 226          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A6U5IV75_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5IV75_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.760e-9
Identity = 67/190 (35.26%), Postives = 105/190 (55.26%), Query Frame = 0
Query:   85 DDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTG--PEG-------TDGETGASVRRGSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAHLSCD--LSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLRAILQQRAAS 263
            +++LA SRERNR HA++TR RKKA+L  LQ RAR+L+ E  +L+++++E + A++LL L +   PE        ++      V  G    A +  D+   A     +      ++  +  K   +   D    +LTP E E +RRERNR+HAK TR RKK+    +++ I + E   RR+R +L + AAS
Sbjct:   36 EERLARSRERNREHARRTRLRKKAQLRILQDRARELQNENSNLKQSIEECSIANILLGLSSNVCPESIPQLSLSSESTPTPPVIFGKRKRAVSDADSDSTARKAAMASIPGLSNKNHINWKTGYYTDTDGNQKQLTPSELENLRRERNRMHAKMTRDRKKVFIASIDQTISLLEAENRRMREVLSKCAAS 225          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: BZP14_PHATC (bZIP transcription factor 14 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=BZP14_PHATC)

HSP 1 Score: 69.3 bits (168), Expect = 5.540e-9
Identity = 70/213 (32.86%), Postives = 106/213 (49.77%), Query Frame = 0
Query:   81 KLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDG------------------------ETGASVRRGSCSS----------AAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAH--LSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLRAIL 257
            K   DD++  SRERNR+HA+KTRQRKK ++  L+ RA  LK EQ  L++ ++E+ TA++L+ L +  +                            E  A +  G  +S          AA+    +   G +V S      DE ++ D    +  L  D S+ TP+E +QIRRERNR+HAKRTR RK++  +++    R+ E+    LR  L
Sbjct:  113 KADTDDRVQRSRERNRIHARKTRQRKKEQMQSLEGRATDLKHEQIRLKQIINEKNTANILVGLFSKGQSQSPNEDPRVEALMYRSVEEIPDPSKIPELPALILPGQHASKKIKVAVPVVAASPQSMSDGGGEEVASTSDVSGDEQQVPDDGIDYDLLGKDRSKCTPEELDQIRRERNRMHAKRTRDRKRIFTEEMAEMCRILEEENHLLRVHL 325          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.030e-8
Identity = 63/179 (35.20%), Postives = 91/179 (50.84%), Query Frame = 0
Query:   90 ASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCA-----------------GTDVDSXXXXXXDEVELLDKLPAH-----------LSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLE 240
            ASRERNR+HA+KTRQRKK  + +LQ RA +LK +Q  L++ + E+ TA++LL +    +G  G+    V      SA    DA+                    GT   +       + E +  LP             L  D S+ TP E ++IRRERNR+HAKRTR RK++  +++E
Sbjct:    9 ASRERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYELLGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEME 187          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S3HRZ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRZ3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.180e-8
Identity = 66/184 (35.87%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   78 KRTKLSHDDKLAASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPE--GTDGETGASVRR-----GSCSSAAATDDAAGCAGTDVDSXXXXXXDEVELLDKLPAHLSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAIRRLR 254
            KR KL+ D+++   RERNR+HA+ TR+RK+A++  LQ R ++L  E+  L+    E + AS+L+ L + P+  G   E G +  +     G  SS     DA     +++ S      +E+E+  ++   L  D S  +  + E IRRERNR+HAK+TR RKK +  ++E  I   E+ IR LR
Sbjct:   71 KRRKLNEDERVQRCRERNRIHARNTRERKRAQMDLLQQRIQELSDEKKSLENYEPEESVASILMSLSSSPKTRGKYFEDGVAAAKDFEQLGDESSKRFAADAIERIKSEI-SATLSDDEELEMNSEI---LLKDKSACSSADLEMIRRERNRMHAKKTRLRKKKMLSEMESIILGLERDIRDLR 250          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.090e-8
Identity = 63/179 (35.20%), Postives = 91/179 (50.84%), Query Frame = 0
Query:   90 ASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCA-----------------GTDVDSXXXXXXDEVELLDKLPAH-----------LSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLE 240
            ASRERNR+HA+KTRQRKK  + +LQ RA +LK +Q  L++ + E+ TA++LL +    +G  G+    V      SA    DA+                    GT   +       + E +  LP             L  D S+ TP E ++IRRERNR+HAKRTR RK++  +++E
Sbjct:    9 ASRERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYELLGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEME 187          
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.750e-8
Identity = 63/179 (35.20%), Postives = 91/179 (50.84%), Query Frame = 0
Query:   90 ASRERNRVHAQKTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGTDGETGASVRRGSCSSAAATDDAAGCA-----------------GTDVDSXXXXXXDEVELLDKLPAH-----------LSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLE 240
            ASRERNR+HA+KTRQRKK  + +LQ RA +LK +Q  L++ + E+ TA++LL +    +G  G+    V      SA    DA+                    GT   +       + E +  LP             L  D S+ TP E ++IRRERNR+HAKRTR RK++  +++E
Sbjct:  181 ASRERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYELLGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEME 359          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351027 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A835YJN1_9STRA3.700e-258100.00BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2REX0_9STRA3.180e-1542.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2RAP5_9STRA1.250e-1138.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4AQ14_9STRA6.970e-1032.65Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A6U5IV75_9STRA1.760e-935.26Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
BZP14_PHATC5.540e-932.86bZIP transcription factor 14 n=1 Tax=Phaeodactylum... [more]
A0A7S4VPU5_9STRA1.030e-835.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3HRZ3_9STRA1.180e-835.87Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4W4V3_9STRA2.090e-835.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RSS5_9STRA2.750e-835.20Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..233
NoneNo IPR availableCOILSCoilCoilcoord: 103..130
NoneNo IPR availableCOILSCoilCoilcoord: 236..256
NoneNo IPR availableGENE3D1.20.5.170coord: 84..141
e-value: 5.7E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..97
NoneNo IPR availableCDDcd14809bZIP_AUREO-likecoord: 91..138
e-value: 2.99249E-10
score: 53.7885
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 83..145
e-value: 0.0085
score: 21.2
coord: 209..273
e-value: 0.059
score: 13.3
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 85..133
score: 9.277589
IPR046347Basic-leucine zipper domain superfamilySUPERFAMILY57959Leucine zipper domaincoord: 85..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_78contigContig_78:512219..513625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351027mRNA_12548Tribonema minus UTEX_B_3156 mRNAContig_78 512219..513842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351027|estExt_Genemark1.C_Ctg_780050 ID=Trimin1|351027|estExt_Genemark1.C_Ctg_780050|Name=jgi.p|Trimin1|351027|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=469bp
MSTASASSDGGGGQAAYVLRPLKKRPLSDNAPPGSSARSTASTCSYSSHT
SGTGSGDDGNSTDDDARHQQHEQGACSKRTKLSHDDKLAASRERNRVHAQ
KTRQRKKARLLDLQARARQLKAEQDHLQEAVDERATASLLLRLGTGPEGT
DGETGASVRRGSCSSAAATDDAAGCAGTDVDSDEDDDNDEVELLDKLPAH
LSCDLSRLTPDEREQIRRERNRLHAKRTRTRKKLVFQDLERQIRVSEKAI
RRLRAILQQRAASPSQQQQQQHQQQQQPLPPHTAEADSKPARMAPSPTPQ
QAYAGSRSPCRKQMAIARPASAASSGASPSAACLAPPLVPLAVLPVAPSA
ATKLPMVTAQAPAGAEYGSVPAHMYAHYPIYPPHAAAYVAAAGALLPGIY
GGGGGAAAAAAALPAHVLQAHAFDMQGRYAAAAAAAAAYPQQQGTPQAGA
AAAAAAHPYAAAYYQYHQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR046347bZIP_sf