Trimin1|351016|estExt_Genemark1.C_Ctg_780035 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351016
Unique NameTrimin1|351016|estExt_Genemark1.C_Ctg_780035
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length514
Homology
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A835YLL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL2_9STRA)

HSP 1 Score: 807 bits (2084), Expect = 1.600e-291
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0
Query:    1 MAGIDAVMDAMDRQAEEAEAAALXXXXXXXXAIEAQLPVMHPHEGQQFWYDGIHVKYRRIDDAAMEEAVAAKARLRTAGMCSVCMEEQQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQELGLLHTEVPPEPGAELVRETSGPAAVDHDAHAATDA 407
            MAGIDAVMDAMDRQAEEAEAAALXXXXXXXXAIEAQLPVMHPHEGQQFWYDGIHVKYRRIDDAAMEEAVAAKARLRTAGMCSVCMEEQQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQELGLLHTEVPPEPGAELVRETSGPAAVDHDAHAATDA
Sbjct:    1 MAGIDAVMDAMDRQAEEAEAAALXXXXXXXXAIEAQLPVMHPHEGQQFWYDGIHVKYRRIDDAAMEEAVAAKARLRTAGMCSVCMEEQQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQELGLLHTEVPPEPGAELVRETSGPAAVDHDAHAATDA 407          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.210e-41
Identity = 108/325 (33.23%), Postives = 159/325 (48.92%), Query Frame = 0
Query:   79 GMCSVCMEE-QQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLM-----EFAHYSA----------------------GSADFERALPGALAADLHLFEAGAISAT-------VFVERIAAAVDGDIAQP--CAVTAEQ---DPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGF 363
            G C VC+E+   V+ + +LH       S +  D     D T  AC  CL  YFT IV  G++G CPRM+C  CP VV E  W+ LVE      F++RAA LL++QC  CH+R ++M     +  + SA                       +A   +  P  + +  +  +    S+T       +F   +   + G    P  C +  E    +P +     E+  ++  L+   + C++D ERRA LH RF+  +P+V T CC ++HCY CRV   HH QTC +Y+A      + V  CP C +Y+VK DGC S+SC+CGH F
Sbjct:   59 GACMVCLEDCDNVLDSAWLHR---LAASSSASDVGGT-DCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGLAPATPPSATTATAITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIGQAAQESRDELMVLL---MSCVEDSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGR--GHQDVCKCPGCGVYVVKGDGCDSISCICGHDF 374          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S3UWB4_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB4_HETAK)

HSP 1 Score: 166 bits (419), Expect = 8.530e-41
Identity = 100/266 (37.59%), Postives = 146/266 (54.89%), Query Frame = 0
Query:  120 VACEGCLAKYFTAIVAEGYNGVCPRMKCPFC-PLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPG------------ALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWA-LMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQE 371
            VAC+ C + +F  IV+E Y+G+  +M CP C  + VP   W+   +PE   LF++RAAILL+LQC+ CHTR  L  F    +   D ++ + G            A +  L LF +G+I+   F + I   +  D  Q    + ++ P             W  +M+ +L  I+D  +RAVLH R+L   P   TPCC  V C+RCR G  H GQTC++  AA + + E++ TCP C+I +VK DGCSSV+CVCG  F ++ R +E
Sbjct:   93 VACKSCASSHFEGIVSESYDGILRKMTCPSCISMEVPSSTWANFTDPEMLALFQRRAAILLSLQCAGCHTRKDL--FIQDQSLPTDADKHMEGIETMLVASEKRDAFSQALGLFTSGSINEEDFFQLICITLFPDQFQSS--SPDEGP-------------WEDVMKPILLSIRDARQRAVLHLRYLRSFPKCSTPCCKRVQCFRCRTGQWHEGQTCSQVLAAQFQNSEVL-TCPACAIQLVKGDGCSSVTCVCGKTFNWDQRKKE 340          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S4DEH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH3_HETAK)

HSP 1 Score: 167 bits (422), Expect = 1.580e-40
Identity = 102/259 (39.38%), Postives = 140/259 (54.05%), Query Frame = 0
Query:  116 DSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFC-PLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALM-REVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQEL 372
            D    +C  CL  +F +IV +GY+G+  +M CP C  + VP   WS  V+  T  LF++RAAILL+LQCS CH+R  L  F   +   ++ E+ L   L   L    AG     + + R     D + A    +     P       +  A  WA   R VL  ++D   RAVLH R+L  HP V T CC A  C+RCR G  H GQTCAE  AA+Y   +L+ TC +C + +VK DGCSSV+CVCG+ F ++ R +E+
Sbjct:   89 DCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDL--FIPETELPSNPEQHLKNTLKPLLENEHAGDQEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSVRDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLL-TCASCGLQLVKGDGCSSVTCVCGNHFDWDQRCREV 344          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK)

HSP 1 Score: 142 bits (358), Expect = 5.710e-34
Identity = 97/292 (33.22%), Postives = 137/292 (46.92%), Query Frame = 0
Query:   81 CSVCMEEQQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFC-PLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLM--EFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEEL---VATCPNCSIYIVKNDGCSSVSCVCGHGFCFE 366
            C +C+E    +  EY     SFC S          D    AC+ C+AK+F   ++ GY+G+  +M CP C    VP   W  +     + L+ +RAAILLTLQCS CH R +++  E  +    +    +A+   L  +   F  G I+     ERI+                          E     W +M+ +L+ I+D   RA L+ R+L  +P V T CC A  C+RCR    H G TC E +     +E+L   V  CP C I +VK DGC  V+CVCGHGF +E
Sbjct:   80 CDICLETLSSLELEY-----SFCGS----------DCPLKACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILPDEDENQVLPTDGMPKAVKEELLMEFERFNDGKINDQELYERIST--------------------YFFSFENLPNPWLVMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKEL-EAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWE 335          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK)

HSP 1 Score: 137 bits (346), Expect = 7.660e-33
Identity = 87/253 (34.39%), Postives = 125/253 (49.41%), Query Frame = 0
Query:  120 VACEGCLAKYFTAIVAEGYNGVCPRMKCPFC-PLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLM--EFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEEL---VATCPNCSIYIVKNDGCSSVSCVCGHGFCFE 366
            +AC+ C+AK+F   ++ GY+G+  +M CP C    VP   W  +     + L+ +RAAILLTLQCS CH R +++  E  +    +    +A+   L  +   F  G I+     ERI+                          E     W +M+ +L+ I+D   RA L+ R+L  +P V T CC A  C+RCR    H G TC E +     +E+L   V  CP C I +VK DGC  V+CVCGHGF +E
Sbjct:   41 IACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILPDEDENQVLPTDGMPKAVKEELLMEFERFNDGKINDQELYERIST--------------------YFFSFENLPNPWLVMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKEL-EAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWE 272          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S2G880_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G880_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.010e-31
Identity = 91/261 (34.87%), Postives = 131/261 (50.19%), Query Frame = 0
Query:  122 CEGCLAKYFTAIVAEGYNGVCPRMKCPFCP-LVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLM------EFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERI--AAAVDGD-IAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQEL 372
            C+GC  +Y   IV +GY+G CP++KCP CP  ++P  +W+ +V+  T      RA  LL+LQCSSCH R SLM        AH   G   +  A   A       F     S  +  ER    A  +GD +AQ   +    D     +V  +      ++ +V+  I D ERRA  H  ++   P   T C  A HC+RC +   H G +CAEYQ +    E++V  CP C + + K DGC+SV+CVCG  F ++  L ++
Sbjct:  124 CKGCAKQYVEHIVKDGYDGACPQVKCPACPGRIIPSSKWAPVVDKATKDAIGDRAMKLLSLQCSSCHARKSLMIGHDPMTLAH--TGDEAWNTAATTAEQQLKVTFGQHYKSFVMARERYLRGAIKEGDFLAQLTPLCGVADA----IVKGSAKGPCPVVLQVINSITDPERRATFHVAYMRKFPECWTRCHKARHCFRCHITGYHDGMSCAEYQMSKATVEDIVP-CPQCGVQLTKGDGCASVNCVCGKSFNWDQELAKV 377          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.850e-26
Identity = 93/326 (28.53%), Postives = 146/326 (44.79%), Query Frame = 0
Query:   63 AAMEEAVAAKARLRTAGM---CSVCMEEQQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPL-VVPEMRWSALVEPETSRL--------FRQRAAILLTLQCSSCHTRCSLMEFAHYSAGSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTAEQ----DPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQEL 372
            A ++E     AR   AG+   C+VC++ + +VG         FC            D   + C  CLA++    V  GY G   RM CP  P  +    RW   V     +         F   A  +L+LQC SCH R  LM         A  ++A+    A+   +++       ++ + +   + G ++Q   +   +     PE     P      + L+   L  I+D ER+A LH  FL   P   + CC +VHC+RC +   H  +TC E+QA+    E++V  CP C + + K DGCSSVSCVCG+ F +++ + ++
Sbjct:   10 APLQEPTVQDARA-VAGLLVPCAVCLDPKALVG--------GFCGP----------DCQTIMCSSCLAEHCRVTVDSGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLMR----PTSKALADKAMQALQASHAPVYD------HLYKQHVEPFLVGAVSQEHVIVQCEAFLPKPEFALTHPSGKDTAFGLL---LDSIEDDERKATLHYAFLRRFPKCISNCCKSVHCFRCHISGFHTNKTCEEFQASRTTVEDVVP-CPGCGVQLTKGDGCSSVSCVCGNSFNWDTEVAKI 302          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S1TQX8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQX8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.310e-25
Identity = 104/335 (31.04%), Postives = 149/335 (44.48%), Query Frame = 0
Query:   98 ATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCP--FCPLVVPEMRWSALVEPETS-------RLFRQRAAILLTLQCSSCHTR------------------------------CSLMEFAHYSAG-------SADFERALPGALAADL-----------HLFEAGAISATV--FVERIAAAVDGDIAQPCAVTAEQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRLQELG 373
            A E+    EA  D  AV       C  CL  Y  + V   Y G C  ++CP   C  ++P   W AL++ +T        R F + A  +L+LQC SCH+R                              CS+ +     A        +A    A+P  LA+D+           HL +AGA  A +   V ++A A +G   +    T        H  P    +   L+  VL  I D ERRA L SR L+LHP  ++ CC   HCYRC+    H G +C   Q     +E++V TC NC ++IVK DGCSS++CVCG  F +++R+ ++G
Sbjct:  241 AEETKGAEEADGDGDAVPCCGMTICRPCLGAYVQSHVDALYLGACKPLRCPDPACRAILPMPLWLALLDQKTGDERAGLRRQFIKYAKSVLSLQCGSCHSRGTLHVGDYPNAPSCFPLKPGCVHPLSMAGACSVAKSKAVVAALGREVTTTAPGGEAIPPKLASDVMEVPLMKYMRGHL-DAGACWAALKRCVPQLACASEGLADEEYCPTVP-----GHADPTAQYEKELLVNAVLCRIPDPERRAALLSRVLALHPKAKSNCCAYTHCYRCKTKGFHDGVSCDANQGWDRGAEQVV-TCHNCGVWIVKGDGCSSINCVCGANFNWDTRVTQMG 568          
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Match: A0A7S3YGS0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGS0_HETAK)

HSP 1 Score: 100 bits (248), Expect = 1.170e-20
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0
Query:  271 MREVLKCIQDWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESR 368
            +R  L  + D ERRA+LH RFL   P V+T CC A  C+RCR    H G+TCA+ QA  Y  + +V+ C  C + +VK DGCSSV+CVCGH F +++R
Sbjct:   10 VRPALARVADPERRALLHLRFLRRAPRVRTKCCRADQCFRCRTRAWHAGRTCAQVQAELYKDDTIVS-CERCGVALVKGDGCSSVTCVCGHNFDWDAR 106          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351016 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A835YLL2_9STRA1.600e-291100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G6K5_ECTSI1.210e-4133.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3UWB4_HETAK8.530e-4137.59Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S4DEH3_HETAK1.580e-4039.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D641_HETAK5.710e-3433.22Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XSF2_HETAK7.660e-3334.39Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2G880_9STRA1.010e-3134.87Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SQB9_9STRA3.850e-2628.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TQX8_9STRA1.310e-2531.04Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3YGS0_HETAK1.170e-2048.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 512..513
NoneNo IPR availableGENE3D1.20.120.1750coord: 316..370
e-value: 4.6E-6
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..513
NoneNo IPR availablePANTHERPTHR11685:SF225RBR-TYPE E3 UBIQUITIN TRANSFERASEcoord: 21..366
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 337..365
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 21..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_78contigContig_78:403164..409236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351016mRNA_12530Tribonema minus UTEX_B_3156 mRNAContig_78 403138..409236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351016|estExt_Genemark1.C_Ctg_780035 ID=Trimin1|351016|estExt_Genemark1.C_Ctg_780035|Name=jgi.p|Trimin1|351016|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=514bp
MAGIDAVMDAMDRQAEEAEAAALAADAAAEAAIEAQLPVMHPHEGQQFWY
DGIHVKYRRIDDAAMEEAVAAKARLRTAGMCSVCMEEQQVVGAEYLHATE
SFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFC
PLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLMEFAHYSA
GSADFERALPGALAADLHLFEAGAISATVFVERIAAAVDGDIAQPCAVTA
EQDPELNHVVPETTAKVWALMREVLKCIQDWERRAVLHSRFLSLHPVVQT
PCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKND
GCSSVSCVCGHGFCFESRLQELGLLHTEVPPEPGAELVRETSGPAAVDHD
AHAATDAAAAAAAAAGTDADPAAAAVAAAEDAAGAAAAAAAAAAGNTAAA
DMADTTDAAVAAAAAAAAAAAAAAATNVAVAAAFDAATAAGPAEAGAVTD
GGRRQRRRRRHTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031127E3_UB_ligase_RBR