Trimin1|350994|estExt_Genemark1.C_Ctg_770047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350994
Unique Name	Trimin1\|350994\|estExt_Genemark1.C_Ctg_770047
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	455

Homology

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BLAST of jgi.p|Trimin1|350994 vs. uniprot
Match: A0A836C9H0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9H0_9STRA)

HSP 1 Score: 765 bits (1975), Expect = 6.810e-277
Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 0

Query:    1 MSRILDAAGMLQRSGKEHSGQQPNLQDQLQFDRSRPSLCFNIARLQHQMQQQQFAPPGTYSLSETSSSASLIASPAVSAPLPTHVAHRHLAKCLSDPALHMAATTAQEMIRGTDFWRALRAGVDVRKHAVPGWRDGFSGSLVLPYAFSDNDVTSSEAGDDVGAGGSARRRRWLRKPKPVSDDGKGMVTLFIDADGDSLCWCKLGQPVLRRDPRYAIRIGDVRHVCVAPPSPRDGRALPAITLSTPTRILSFSVDGRALHALLADTLRSVADLNAALFSAAQRPQHRPFYSASAFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLPPLSRASAPLDHVLPPPRVPRVAHIGRLSGGLGVQRRGSLDGGGGSDGARGLPPRSASVPFDLHAACDLSAVSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGAACDDDDVTGCADAPQPEVPQ 454
            MSRILDAAGMLQRSGKEHSGQQPNLQDQLQFDRSRPSLCFNIARLQHQMQQQQFAPPGTYSLSETSSSASLIASPAVSAPLPTHVAHRHLAKCLSDPALHMAATTAQEMIRGTDFWRALRAGVDVRKHAVPGWRDGFSGSLVLPYAFSDNDVTSSEAGDDVGAGGSARRRRWLRKPKPVSDDGKGMVTLFIDADGDSLCWCKLGQPVLRRDPRYAIRIGDVRHVCVAPPSPRDGRALPAITLSTPTRILSFSVDGRALHALLADTLRSVADLNAALFSAAQRPQHRPFYSASAFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLPPLSRASAPLDHVLPPPRVPRVAHIGRLSGGLGVQRRGSLDGGGGSDGARGLPPRSASVPFDLHAACDLSAVSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGAACDDDDVTGCADAPQPEVPQ
Sbjct:    1 MSRILDAAGMLQRSGKEHSGQQPNLQDQLQFDRSRPSLCFNIARLQHQMQQQQFAPPGTYSLSETSSSASLIASPAVSAPLPTHVAHRHLAKCLSDPALHMAATTAQEMIRGTDFWRALRAGVDVRKHAVPGWRDGFSGSLVLPYAFSDNDVTSSEAGDDVGAGGSARRRRWLRKPKPVSDDGKGMVTLFIDADGDSLCWCKLGQPVLRRDPRYAIRIGDVRHVCVAPPSPRDGRALPAITLSTPTRILSFSVDGRALHALLADTLRSVADLNAALFSAAQRPQHRPFYSASAFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLPPLSRASAPLDHVLPPPRVPRVAHIGRLSGGLGVQRRGSLDGGGGSDGARGLPPRSASVPFDLHAACDLSAVSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGAACDDDDVTGCADAPQPEVPQ 454

[Close]

BLAST of jgi.p|Trimin1|350994 vs. uniprot
Match: A0A835ZAI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.780e-13
Identity = 72/229 (31.44%), Postives = 88/229 (38.43%), Query Frame = 0

Query:  115 FWRALRAGVDVRKHAVPGWRDGFSGSLVLPYAFSDNDVTSSEAGDDVGAGGSARRR----------------------------------------------RWLRKPKPVSDDGKGMVTLFIDADGDSLCWCKLGQPVLRRDPRYAIRIGDVRHVCVAP-PSPRDGR----------ALPA-----------ITLSTPTRILSFSVDGRALHALLADTLRSVADLNAA 275
            FWRALRAGVDV KHA P  R     +   P A  D        G    + G+A R                                               R L  P PV   G+GMVTLF D    SLCWC  GQ VL  D R ++ I D+ H+ +AP PSP              A PA           +TL T +R L F++ GR L  L+   L+ + D N A
Sbjct:  107 FWRALRAGVDVHKHASPLPR----AAAAEPPAACDGCCPRCATGHHRWSTGAAARXXXXXXXXXXXXXXXXXXXXXXSXXRSARSARAATLPSGRRAVRALARLLHGPGPVQAGGEGMVTLFADRAQSSLCWCVPGQSVLSPDTRASVPIEDIIHMDIAPIPSPTTSAPRCLNPLPPTASPAATAAVTPIATDVTLWTASRALRFTIKGRQLQDLIVSGLQRMVDANRA 331

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350994 vs. uniprot

BLAST of jgi.p|Trimin1|350994 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836C9H0_9STRA	6.810e-277	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAI7_9STRA	9.780e-13	31.44	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..30

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_77	contig	Contig_77:526107..528830 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350994	mRNA_12483	Tribonema minus UTEX_B_3156	mRNA	Contig_77 526107..528830 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350994|estExt_Genemark1.C_Ctg_770047 ID=Trimin1|350994|estExt_Genemark1.C_Ctg_770047|Name=jgi.p|Trimin1|350994|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=455bp
MSRILDAAGMLQRSGKEHSGQQPNLQDQLQFDRSRPSLCFNIARLQHQMQ
QQQFAPPGTYSLSETSSSASLIASPAVSAPLPTHVAHRHLAKCLSDPALH
MAATTAQEMIRGTDFWRALRAGVDVRKHAVPGWRDGFSGSLVLPYAFSDN
DVTSSEAGDDVGAGGSARRRRWLRKPKPVSDDGKGMVTLFIDADGDSLCW
CKLGQPVLRRDPRYAIRIGDVRHVCVAPPSPRDGRALPAITLSTPTRILS
FSVDGRALHALLADTLRSVADLNAALFSAAQRPQHRPFYSASAFGGSGGG
SSGGGGSGGAALYASTPASGGGGGARLPPLSRASAPLDHVLPPPRVPRVA
HIGRLSGGLGVQRRGSLDGGGGSDGARGLPPRSASVPFDLHAACDLSAVS
AAAAVEVEVLARAAAAAAEAAAPAQAAAVAAPGAACDDDDVTGCADAPQP
EVPQ*