Trimin1|350984|estExt_Genemark1.C_Ctg_770020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350984
Unique NameTrimin1|350984|estExt_Genemark1.C_Ctg_770020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length370
Homology
[Close]
BLAST of jgi.p|Trimin1|350984 vs. uniprot
Match: A0A836C8R1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8R1_9STRA)

HSP 1 Score: 363 bits (931), Expect = 6.150e-121
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 
Query:    1 MAQDMGAAAAAPLKAPRLGDADQPASMSTIGVTVRIFGFLGAKKFLFMALTCKSTKATYDETFSAPAQKVFVKWAWDSGLPKNGRLLAQTAADGDISLAEFLCSGETRRTREPWAMQASEAAATHGHLAFLQWARDDGMEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPLLQRLRKAVYAPWNPSTTVAAVHSGNFALLQWAVTTGCPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 369
            MAQDMGAAAAAPLKAPRLGDADQPASMSTIGVTVRIFGFLGAKKFLFMALTCKSTKATYDETFSAPAQKVFVKWAWDSGLPKNGRLLAQTAADGDISLAEFLCSGETRRTREPWAMQASEAAATHGHLAFLQWARDDGMEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPLLQRLRKAVYAPWNPSTTVAAVHSGNFALLQWAVTTGCPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP
Sbjct:    1 MAQDMGAAAAAPLKAPRLGDADQPASMSTIGVTVRIFGFLGAKKFLFMALTCKSTKATYDETFSAPAQKVFVKWAWDSGLPKNGRLLAQTAADGDISLAEFLCSGETRRTREPWAMQASEAAATHGHLAFLQWARDDGMEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPLLQRLRKAVYAPWNPSTTVAAVHSGNFALLQWAVTTGCPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 369
[Close]
BLAST of jgi.p|Trimin1|350984 vs. uniprot
Match: A0A835YN49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN49_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.890e-60
Identity = 244/402 (60.70%), Postives = 261/402 (64.93%), Query Frame = 0 
Query:    1 MAQDMGAAAAA---PLKAPRLGDADQPASMSTIG--VTVRIFGFLGAKKFLFMALTCKSTKATYDETFSAP-----------------------AQKVFVKWAWDSGLPKNGRLLAQTAADGDISLAEFLCSGETRRTREPWAMQASEAAATHGHLAFLQWARDD---GMEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPLLQRLR--KAVYAPWNPSTTVAAVHSGNFALLQWAVTTGCPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 369
            MA D+GAA AA   PLK PRLG+A++PASM TIG  VT RIFGFLGA++FLFM LTCKS ++ Y ETFSAP                        QK  VKWAW+SGLPKNG LL Q AADGDISLAEFL SG+TRRTREPW MQASEAAA+ GHLAFLQWARD+   GMEK       XXXXXXXXXXXXXX                                                 P+   ++   A    W  +    A  +  FALLQWAVTTGCPT                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP
Sbjct:    1 MAHDIGAAEAAAPPPLKNPRLGEAEEPASMFTIGKDVTARIFGFLGARRFLFMGLTCKSARSIYVETFSAPDVSKATSLRLRDLCGFPVERRLAQQKALVKWAWESGLPKNGGLLVQAAADGDISLAEFLRSGKTRRTREPWTMQASEAAASAGHLAFLQWARDENGGGMEKWGRRVILXXXXXXXXXXXXXXHSQGCMAAGTD--------------------------------------PVAAAIKGGHADVVDWFLAHD--AKPTATFALLQWAVTTGCPTIAHTCAAAADCGQLGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAHAIVEFIDSVPAGEGEGEESAP 362
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350984 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836C8R1_9STRA6.150e-121100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN49_9STRA5.890e-6060.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 81..357
e-value: 8.9E-15
score: 56.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 91..336
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 72..347
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 72..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_77contigContig_77:165038..166429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350984mRNA_12454Tribonema minus UTEX_B_3156 mRNAContig_77 165038..166429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350984|estExt_Genemark1.C_Ctg_770020 ID=Trimin1|350984|estExt_Genemark1.C_Ctg_770020|Name=jgi.p|Trimin1|350984|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=370bp
MAQDMGAAAAAPLKAPRLGDADQPASMSTIGVTVRIFGFLGAKKFLFMAL
TCKSTKATYDETFSAPAQKVFVKWAWDSGLPKNGRLLAQTAADGDISLAE
FLCSGETRRTREPWAMQASEAAATHGHLAFLQWARDDGMEKWGRRVILNA
AAQGHLALIEWAHSQGCMAAGTDPVAAAIKGGHADVVDWFLAHDTKPSPA
SCTAAARKGDLPLLQRLRKAVYAPWNPSTTVAAVHSGNFALLQWAVTTGC
PTNAHTCAAAADCGQLGMLQWLRAQGCAWDAITCSAAAKGGHLSVLQWAR
SRGCPWTEYTCFQAARHGQLEVLRWVRANGAPWRRSECRRAAAEAKAHAI
VEFIDSVPAGEGEGEESAP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf