Trimin1|350955|estExt_Genemark1.C_Ctg_760023 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350955
Unique NameTrimin1|350955|estExt_Genemark1.C_Ctg_760023
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length107
Homology
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A835YLU3_9STRA (40S ribosomal protein S26 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU3_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.880e-65
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE 106
            MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE 106          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: D8LSF3_ECTSI (40S ribosomal protein S26 n=3 Tax=Eukaryota TaxID=2759 RepID=D8LSF3_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 9.690e-59
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE 106
            MTVKRRNHGRNKKGRGHV RVRC STAKAIPKDKAIKRFIVRNIVDASSLRD+REASV+ NYALPKLYIKQYYCVEAAVHQRIVRSRSAE RRNR+PP R RPKR+
Sbjct:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAETRRNRDPPVRHRPKRD 106          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A7S2SUN8_9STRA (40S ribosomal protein S26 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUN8_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.550e-54
Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVR 102
            MTVKRR+HGRNKKGRGHVKRVRC ST KAIPKDKAIKRFIVRNIVDASS+RD+REAS + NYALPKLYIKQYY VEAAVHQRIVRSRS E RRNREPPAR R
Sbjct:   15 MTVKRRSHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIREASAFENYALPKLYIKQYYSVEAAVHQRIVRSRSTENRRNREPPARFR 116          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A485LRR7_9STRA (40S ribosomal protein S26 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRR7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.390e-54
Identity = 87/104 (83.65%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPK 104
            MTVKRRNHGRNKK RGHVKRV CVSTAK IPKDKAIKRF VRNIVDAS++RDL+EASVY  YALPK+YIK YYC+EAA+HQRIVR RS E RRNREPPAR+RPK
Sbjct:   32 MTVKRRNHGRNKKNRGHVKRVHCVSTAKLIPKDKAIKRFTVRNIVDASAMRDLKEASVYETYALPKIYIKNYYCIEAAIHQRIVRVRSVEGRRNREPPARIRPK 135          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A7S2MQP1_9STRA (40S ribosomal protein S26 n=4 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2MQP1_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.000e-53
Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPAR 100
            MTVKRRNHGRNKKGRGHVKRVRC ST KAIPKDKAIKRFIVRNIVDASS+RD+R+AS +  YALPK+YIKQYYC+EAAVHQRIVRSRS E RRNREPPAR
Sbjct:   24 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIRDASAFEAYALPKIYIKQYYCIEAAVHQRIVRSRSIENRRNREPPAR 123          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: W4H2M3_9STRA (40S ribosomal protein S26 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=W4H2M3_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.040e-53
Identity = 86/104 (82.69%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPK 104
            MTVKRRNHGRNKK RGHVKRV CVSTAK IPKDKAIKRF+VRNIVDAS++RDL+EASVY  YALPK+YIK YY +EAA+HQRIVR RS E RRNREPPAR+RPK
Sbjct:    1 MTVKRRNHGRNKKNRGHVKRVHCVSTAKLIPKDKAIKRFVVRNIVDASAMRDLKEASVYETYALPKIYIKNYYSIEAAIHQRIVRVRSGEGRRNREPPARIRPK 104          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A067D0A6_SAPPC (40S ribosomal protein S26 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D0A6_SAPPC)

HSP 1 Score: 171 bits (432), Expect = 2.990e-53
Identity = 85/105 (80.95%), Postives = 96/105 (91.43%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKR 105
            MTVKRRNHGRNKKGRGHVKRV CVSTAK IPKDKAIKRF+VRN+VDAS++RDL+EASVY +YALPK+YIK YY +EAA+HQRIVR RS + R+NREPPAR RPKR
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVHCVSTAKLIPKDKAIKRFVVRNMVDASAMRDLKEASVYESYALPKIYIKNYYSIEAAIHQRIVRVRSVDGRKNREPPARFRPKR 105          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A7S3MCB3_9STRA (40S ribosomal protein S26 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCB3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.250e-53
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRP 103
            MTVKRRNHGRNK GRGHVKRVRCVSTAKAIPKDKAIKRF+VRNIVD+S+LRD++E+S Y NY LPKLYIKQYYC+EAAVHQRIVR RSA  R+NR PP RVRP
Sbjct:    1 MTVKRRNHGRNKHGRGHVKRVRCVSTAKAIPKDKAIKRFLVRNIVDSSALRDIKESSAYENYQLPKLYIKQYYCIEAAVHQRIVRVRSALDRKNRAPPVRVRP 103          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: A0A6U2MCR3_9STRA (40S ribosomal protein S26 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2MCR3_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.020e-51
Identity = 86/101 (85.15%), Postives = 90/101 (89.11%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARV 101
            MTVKRRNHGRNK GRGHVKRVRC ST KAIPKDKAIKRFIVRNIVDASSLRD+REAS Y +YALPKLYIK YYCVEAAVHQRIVR RS EAR+ R+ P RV
Sbjct:    1 MTVKRRNHGRNKHGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSLRDIREASAYTDYALPKLYIKMYYCVEAAVHQRIVRGRSREARKIRKAPERV 101          
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Match: D0NMJ5_PHYIT (40S ribosomal protein S26 n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0NMJ5_PHYIT)

HSP 1 Score: 165 bits (417), Expect = 8.170e-51
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPAR 100
            MTVKRRNHGRNKKGRGHVKRV CVSTAK IPKDKAIKRF+VRNIVD S++RDL+EASVY +YALPK+YIK YYCVEAA+HQRIVR RS EAR++R PP R
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVHCVSTAKLIPKDKAIKRFVVRNIVDQSAIRDLKEASVYESYALPKIYIKNYYCVEAAIHQRIVRGRSIEARKSRAPPPR 100          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350955 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLU3_9STRA1.880e-65100.0040S ribosomal protein S26 n=1 Tax=Tribonema minus ... [more]
D8LSF3_ECTSI9.690e-5990.5740S ribosomal protein S26 n=3 Tax=Eukaryota TaxID=... [more]
A0A7S2SUN8_9STRA2.550e-5488.2440S ribosomal protein S26 n=1 Tax=Rhizochromulina ... [more]
A0A485LRR7_9STRA3.390e-5483.6540S ribosomal protein S26 n=1 Tax=Aphanomyces stel... [more]
A0A7S2MQP1_9STRA1.000e-5387.0040S ribosomal protein S26 n=4 Tax=Ochrophyta TaxID... [more]
W4H2M3_9STRA1.040e-5382.6940S ribosomal protein S26 n=4 Tax=Saprolegniaceae ... [more]
A0A067D0A6_SAPPC2.990e-5380.9540S ribosomal protein S26 n=3 Tax=Saprolegniaceae ... [more]
A0A7S3MCB3_9STRA4.250e-5383.5040S ribosomal protein S26 n=1 Tax=Spumella elongat... [more]
A0A6U2MCR3_9STRA2.020e-5185.1540S ribosomal protein S26 n=1 Tax=Leptocylindrus d... [more]
D0NMJ5_PHYIT8.170e-5182.0040S ribosomal protein S26 n=6 Tax=Peronosporaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038551Ribosomal protein S26e superfamilyGENE3D3.30.1740.20Ribosomal protein S26ecoord: 1..106
e-value: 1.9E-48
score: 165.6
IPR000892Ribosomal protein S26ePFAMPF01283Ribosomal_S26ecoord: 1..105
e-value: 7.4E-48
score: 161.5
IPR000892Ribosomal protein S26ePANTHERPTHR1253840S RIBOSOMAL PROTEIN S26coord: 1..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:160662..162428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350955mRNA_11340Tribonema minus UTEX_B_3156 mRNAContig_76 160615..162569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350955|estExt_Genemark1.C_Ctg_760023 ID=Trimin1|350955|estExt_Genemark1.C_Ctg_760023|Name=jgi.p|Trimin1|350955|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=107bp
MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSL
RDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPAR
VRPKRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038551Ribosomal_S26e_sf
IPR000892Ribosomal_S26e