Trimin1|350953|estExt_Genemark1.C_Ctg_760020 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350953
Unique NameTrimin1|350953|estExt_Genemark1.C_Ctg_760020
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length116
Homology
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: A0A836C9I1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I1_9STRA)

HSP 1 Score: 221 bits (562), Expect = 8.590e-73
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
Query:    1 MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAALAK 115
            MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAALAK
Sbjct:    1 MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAALAK 115          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: K3WMV8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMV8_GLOUD)

HSP 1 Score: 75.1 bits (183), Expect = 4.400e-15
Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   16 VPARGMAGGHGPA-KEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAP---AAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            + AR M+GGHG      TG E  VR VL +D  +VL  +G Y++++LLFK+KPSK AP   AAAP AA  ST+D  IPS+    F  W + PGN ++W  +L
Sbjct:   18 IQARLMSGGHGHGGPPPTGFEAKVRAVLPQDYQIVLATLGIYSSIILLFKLKPSKKAPEAIAAAPAAA--STSDA-IPSLFDDEFDEWSKLPGNVERWEKSL 116          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: A0A0P1B0D1_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0D1_PLAHL)

HSP 1 Score: 73.9 bits (180), Expect = 1.150e-14
Identity = 42/99 (42.42%), Postives = 54/99 (54.55%), Query Frame = 0
Query:   15 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            R PA+    GHGPA     +E  VR  L KD H+VL  +G Y TL++LFK+KPSK       I +  S+    IPS+    F  W + PGN DKW  +L
Sbjct:   15 RTPAQCRLMGHGPAPVEGSLEAKVRHYLPKDYHIVLATLGAYTTLIMLFKLKPSKKKEEEIVIPSNLSSTSASIPSLFDDEFDEWSKLPGNLDKWEKSL 113          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: A0A3M6VF92_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF92_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.400e-13
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   25 HGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGD-----IPSVESPTFSAWIEAPGNADKWFAAL 113
            HGPA     +E  VR  L KD H+VL  +G YAT+++LFK+KPSK    A  I A PS+++ +     IPS+    F  W + PGN DKW  +L
Sbjct:   25 HGPAAPEGSLEAKVRHYLPKDYHIVLATLGAYATIIMLFKLKPSKKK--AEEIVATPSSSNSNSTLTSIPSLFDDEFDEWSKLPGNMDKWEKSL 116          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: A0A7S2R1X0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1X0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.440e-13
Identity = 51/120 (42.50%), Postives = 64/120 (53.33%), Query Frame = 0
Query:    1 MFALRAGARSARLARV--PARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLL--FKMKPSKPAPAAAPIAAAPSTA-DGDIPSVESPTFSAWIEAPGNADKWFAALAK 115
            M A++A AR + +  V    R   GGH PA E+TGI+KVVRG   +D  L   I+G Y  ++ L   K K S      AP+  AP  A  GDIPSVES  F  +IE   N  KW  +L K
Sbjct:    3 MIAIQATARRSAVVAVRHQQRRQMGGHAPAPEWTGIDKVVRGYFPQDHQLAGAILGGYGVVIALGMLKSKLSSSDEEPAPVVVAPVAAITGDIPSVESAEFDTFIENESNLMKWVDSLEK 122          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: A0A8K1FKH1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH1_PYTOL)

HSP 1 Score: 70.9 bits (172), Expect = 1.930e-13
Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 0
Query:    6 AGARSARLARVPARGMAGGHGPA-KEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAA-APIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            A A   R   +  R M+GGHG      TG E  VR VL +D  +VL  +G Y++++LLFK+KPSK APA  AP A + S+A   +PS+    F  W + PGN  +W  +L
Sbjct:    9 AAAAKPRANNMQTRLMSGGHGHGGPPPTGFEAKVRAVLPQDYQIVLATLGIYSSIILLFKLKPSKAAPAVEAPAATSASSA---VPSLFDDEFDQWSKVPGNMQRWEESL 115          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: W2PCG6_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PCG6_PHYPN)

HSP 1 Score: 66.6 bits (161), Expect = 8.260e-12
Identity = 38/99 (38.38%), Postives = 49/99 (49.49%), Query Frame = 0
Query:   15 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            R PA+     HGPA     +E  VR  L +D H+VL  +G Y TL++LFK+KPSK                  IPS+    F  W + PGN DKW  +L
Sbjct:   15 RTPAQSRLMSHGPAPAEGSLEAKVRHYLPEDYHIVLATLGAYTTLIMLFKLKPSKXXXXXXXXXXXXXXXSTSIPSLFDDEFDEWSKLPGNLDKWEKSL 113          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: H3HCQ7_PHYRM (PDEase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ7_PHYRM)

HSP 1 Score: 69.3 bits (168), Expect = 2.220e-11
Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   15 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            R PA+     HGPA     +E  VR  L +D H+VL  +G Y TL++LFK+KPSK       I A+ ++    +PS+    F  W + PGN  KW  +L
Sbjct:  548 RTPAQSRLMSHGPAPPEGSLEAKVRHYLPEDYHIVLATLGAYTTLIMLFKLKPSKKKEEEIVIPASSNSTSTSVPSLFDDEFDEWSKLPGNLAKWEKSL 646          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: A0A2D4BL17_PYTIN (PDEase domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL17_PYTIN)

HSP 1 Score: 66.6 bits (161), Expect = 1.960e-10
Identity = 45/117 (38.46%), Postives = 59/117 (50.43%), Query Frame = 0
Query:   15 RVPARGMAGGHGPAKEYTGIEK------------------VVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            R+  R MAG HGP    TG E                       VL +D  +VL  +GFY+T++LLFK+KPSK A   AP AA+   A   IPS+    F+ W + PGN D+W  +L
Sbjct:  538 RMQTRTMAGHHGPPP--TGFEAKXXXXXXXXXXXXXXXXXXXXAVLPQDYQIVLATLGFYSTIILLFKLKPSKKA-VEAPAAASAPAASSSIPSLFDDEFAEWSKLPGNMDRWEKSL 651          
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Match: G5A273_PHYSP (PDEase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A273_PHYSP)

HSP 1 Score: 66.2 bits (160), Expect = 2.690e-10
Identity = 38/99 (38.38%), Postives = 49/99 (49.49%), Query Frame = 0
Query:   15 RVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVLGIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWIEAPGNADKWFAAL 113
            R PA+     HGPA     +E  VR  L +D H+VL  +G Y TL++LFK+KPSK                  IPS+    F  W + PGN DKW  +L
Sbjct:  603 RTPAQKRLMSHGPAPPEGSLEAKVRHYLPEDYHIVLATLGAYTTLIMLFKLKPSKXXXXXXXXXXXXXXTSTSIPSLFDEEFDEWSKLPGNLDKWEKSL 701          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350953 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A836C9I1_9STRA8.590e-73100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WMV8_GLOUD4.400e-1547.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1B0D1_PLAHL1.150e-1442.42Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A3M6VF92_9STRA1.400e-1343.62Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A7S2R1X0_9STRA1.440e-1342.50Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A8K1FKH1_PYTOL1.930e-1341.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2PCG6_PHYPN8.260e-1238.38Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
H3HCQ7_PHYRM2.220e-1138.38PDEase domain-containing protein n=1 Tax=Phytophth... [more]
A0A2D4BL17_PYTIN1.960e-1038.46PDEase domain-containing protein (Fragment) n=1 Ta... [more]
G5A273_PHYSP2.690e-1038.38PDEase domain-containing protein n=1 Tax=Phytophth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:145710..147266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350953mRNA_11335Tribonema minus UTEX_B_3156 mRNAContig_76 145561..147365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350953|estExt_Genemark1.C_Ctg_760020 ID=Trimin1|350953|estExt_Genemark1.C_Ctg_760020|Name=jgi.p|Trimin1|350953|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=116bp
MFALRAGARSARLARVPARGMAGGHGPAKEYTGIEKVVRGVLKKDEHLVL
GIVGFYATLVLLFKMKPSKPAPAAAPIAAAPSTADGDIPSVESPTFSAWI
EAPGNADKWFAALAK*
back to top