Trimin1|350871|estExt_Genemark1.C_Ctg_740064 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350871
Unique Name	Trimin1\|350871\|estExt_Genemark1.C_Ctg_740064
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	61

Homology

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BLAST of jgi.p|Trimin1|350871 vs. uniprot
Match: A0A835YLT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLT8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.840e-13
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0

Query:    1 MARFLVGIPCPEGMGMYGSVPAPLVRALLLS 31
            MARFLVGIPCPEGMGMYGSVPAPLVRALLLS
Sbjct:    1 MARFLVGIPCPEGMGMYGSVPAPLVRALLLS 31

[Close]

BLAST of jgi.p|Trimin1|350871 vs. uniprot
Match: A0A835YKK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKK7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.390e-9
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0

Query:    3 RFLVGIPCPEGMGMYGSVPAPLVRALLLS 31
            RFLVG+PCPEGMGMYGSVPAPLVRALL S
Sbjct: 1795 RFLVGVPCPEGMGMYGSVPAPLVRALLFS 1823

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350871 vs. uniprot

BLAST of jgi.p|Trimin1|350871 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YLT8_9STRA	1.840e-13	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YKK7_9STRA	1.390e-9	93.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_74	contig	Contig_74:631507..632895 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350871	mRNA_10582	Tribonema minus UTEX_B_3156	mRNA	Contig_74 631507..632973 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350871|estExt_Genemark1.C_Ctg_740064 ID=Trimin1|350871|estExt_Genemark1.C_Ctg_740064|Name=jgi.p|Trimin1|350871|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=61bp
MARFLVGIPCPEGMGMYGSVPAPLVRALLLSGGGSGGGCGGGEEEEEAGA
QEPAAQPPPP*