Trimin1|350860|estExt_Genemark1.C_Ctg_740044 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350860
Unique Name	Trimin1\|350860\|estExt_Genemark1.C_Ctg_740044
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	966

Homology

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BLAST of jgi.p|Trimin1|350860 vs. uniprot
Match: A0A836C8J8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J8_9STRA)

HSP 1 Score: 1796 bits (4653), Expect = 0.000e+0
Identity = 965/965 (100.00%), Postives = 965/965 (100.00%), Query Frame = 0

Query:    1 MRYGHRDIGAAGGIATQPDFVGPPEGARLLRQSDDGAISTVPPPPLDSDASTDIAAYMTAFVDATATYVAPVVKGITTPSARGPLQVLQAAVIATQPEFVGPPEGARLLRQSDDAATSTDPPPSLGSGASTDIAAYVTAFVDATATYVAPVVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYSAMSIEARVTRYNERAAKVTRLEGTPRLPSDADCLHEAETCLAAVYRNPSVSAEAIVLKSELRQHVHDTIARYRNHRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWTPSASAEALVMKSEVRQYVTETRAAYVQYRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWHPSSSAEALVLKTEVRHYIADTLTRYRNHRFALQRPHARDCGTTPELCNCDFAPERCTIVPSFTWAPSTSAQALVMKAEVRSYISETRAAYVKLRFALQQPHARDCGTTPELCDCDLAPERCAIVPAFPWTPSTSAEALVLKSEVREYIAKTRSLYIHHRFALQRPHARDCGTTPELXXXXXXXXXXXXXXXXVWGAASAAEFVARAEARAYIAELSAEMQWSRERNGAGMWHYDRTSPPDWCSLLLAVLIYMMVAPRVCEAVRRSRCMRAVAKAEEIWEAHTKDRPVTMRLRGCAPCCGGGALFGWRADKVLLLLRALGVAAPPLALAASVDGTAWLLRLPSRAAADALVRSVGAAAGAAPHLFGALAADLLSTDVKEGAPTEVALLRGVPLQQRRXXXXXXXXXXXXXXXDVCDALRVTDFLARAGVHVSAVARYTKDGGGWLVAVPAGSYALEAVFTLINHVHRFACQDVSRYGVNIRELVDTDGALLPPAAEAAAAVAASTPDTPASVPVHTDDAGGRAGAAEGDAPAAXXXXXXXXXXXXXXGVEVADGAGQVDNKDAAVEVMGEGAGEGRAVGAGAAGAAVGG 965
            MRYGHRDIGAAGGIATQPDFVGPPEGARLLRQSDDGAISTVPPPPLDSDASTDIAAYMTAFVDATATYVAPVVKGITTPSARGPLQVLQAAVIATQPEFVGPPEGARLLRQSDDAATSTDPPPSLGSGASTDIAAYVTAFVDATATYVAPVVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYSAMSIEARVTRYNERAAKVTRLEGTPRLPSDADCLHEAETCLAAVYRNPSVSAEAIVLKSELRQHVHDTIARYRNHRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWTPSASAEALVMKSEVRQYVTETRAAYVQYRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWHPSSSAEALVLKTEVRHYIADTLTRYRNHRFALQRPHARDCGTTPELCNCDFAPERCTIVPSFTWAPSTSAQALVMKAEVRSYISETRAAYVKLRFALQQPHARDCGTTPELCDCDLAPERCAIVPAFPWTPSTSAEALVLKSEVREYIAKTRSLYIHHRFALQRPHARDCGTTPELXXXXXXXXXXXXXXXXVWGAASAAEFVARAEARAYIAELSAEMQWSRERNGAGMWHYDRTSPPDWCSLLLAVLIYMMVAPRVCEAVRRSRCMRAVAKAEEIWEAHTKDRPVTMRLRGCAPCCGGGALFGWRADKVLLLLRALGVAAPPLALAASVDGTAWLLRLPSRAAADALVRSVGAAAGAAPHLFGALAADLLSTDVKEGAPTEVALLRGVPLQQRRXXXXXXXXXXXXXXXDVCDALRVTDFLARAGVHVSAVARYTKDGGGWLVAVPAGSYALEAVFTLINHVHRFACQDVSRYGVNIRELVDTDGALLPPAAEAAAAVAASTPDTPASVPVHTDDAGGRAGAAEGDAPAAXXXXXXXXXXXXXXGVEVADGAGQVDNKDAAVEVMGEGAGEGRAVGAGAAGAAVGG
Sbjct:    1 MRYGHRDIGAAGGIATQPDFVGPPEGARLLRQSDDGAISTVPPPPLDSDASTDIAAYMTAFVDATATYVAPVVKGITTPSARGPLQVLQAAVIATQPEFVGPPEGARLLRQSDDAATSTDPPPSLGSGASTDIAAYVTAFVDATATYVAPVVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYSAMSIEARVTRYNERAAKVTRLEGTPRLPSDADCLHEAETCLAAVYRNPSVSAEAIVLKSELRQHVHDTIARYRNHRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWTPSASAEALVMKSEVRQYVTETRAAYVQYRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWHPSSSAEALVLKTEVRHYIADTLTRYRNHRFALQRPHARDCGTTPELCNCDFAPERCTIVPSFTWAPSTSAQALVMKAEVRSYISETRAAYVKLRFALQQPHARDCGTTPELCDCDLAPERCAIVPAFPWTPSTSAEALVLKSEVREYIAKTRSLYIHHRFALQRPHARDCGTTPELXXXXXXXXXXXXXXXXVWGAASAAEFVARAEARAYIAELSAEMQWSRERNGAGMWHYDRTSPPDWCSLLLAVLIYMMVAPRVCEAVRRSRCMRAVAKAEEIWEAHTKDRPVTMRLRGCAPCCGGGALFGWRADKVLLLLRALGVAAPPLALAASVDGTAWLLRLPSRAAADALVRSVGAAAGAAPHLFGALAADLLSTDVKEGAPTEVALLRGVPLQQRRXXXXXXXXXXXXXXXDVCDALRVTDFLARAGVHVSAVARYTKDGGGWLVAVPAGSYALEAVFTLINHVHRFACQDVSRYGVNIRELVDTDGALLPPAAEAAAAVAASTPDTPASVPVHTDDAGGRAGAAEGDAPAAXXXXXXXXXXXXXXGVEVADGAGQVDNKDAAVEVMGEGAGEGRAVGAGAAGAAVGG 965

[Close]

BLAST of jgi.p|Trimin1|350860 vs. uniprot
Match: A0A835YNH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH9_9STRA)

HSP 1 Score: 1258 bits (3255), Expect = 0.000e+0
Identity = 689/940 (73.30%), Postives = 726/940 (77.23%), Query Frame = 0

Query:   87 VLQAAVIATQPEFVGPPEGARLLRQSDDAATSTDPPPSLGSGASTDIAAYVTAFVDATATYVAPVVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYSAMSIEARVTRYNERAAKVTRLEGTPRLPSDADCLHEAETCLAAVY-RNPSVSAEAIVLKSELRQHVHDTIARYRNHRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWTPSASAEALVMKSEVRQYVTETRAAYVQYRFATQRPHARDCGTTPELCDCDFAPERCTIVPAFPWHPSSSAEALVLKTEVRHYIADTLTRYRNHRFALQRPHARDCGTTPELCNCDFAPERCTIVPSFTWAPSTSAQALVMKAEVRSYISETRAAYVKLRFALQQPHARDCGTTPELCDCDLAPERCAIVPAFPWTPSTSAEALVLKSEVREYIAKTRSLYIHHRFALQRPHARDCGTTPELXXXXXXXXXXXXXXXXVWGAASAAEFVARAEARAYIAELSAEMQWSRERNGAGMWHYDRTSPPDWC-------------------------------------------------------------------------------------------------------------SLLLAVLIYMMVAPRVCEAVRRSRCMRAVAKAEEIWEAHTKDRPVTMRLRGCAPCCG-GGALFGWRADKVLLLLRALGVAAPPLALAASVDGTAWLLRLPSRAAADALVRSVGAAAGAAPHLFGALAADLLSTDVKEGAPTEVALLRGVPLQQRRXXXXXXXXXXXXXXX----DVCDALRVTDFLARAGVHVSAVARYTKDGGGWLVAVPAGSYALEAVFTLINHVHRFACQDVSRYGVNIRELVDTDGALLP----PAAEAAAAVAASTPDTPASVPVHTDDAGGRAGAAEGDAP 907
            +LQAAV+ATQP+FVGPPEGARLLRQSDD  TST PPPSLGS ASTDIAAY+TAFVDATATYVAPVVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYSAMS+EARV RYN+RAA VTRLEGTPRLPSDADCLHE ETCLAA    NPS +AE +VLKSE+R+++  T + Y +HRFATQRPHARDCGTTPELC       RCTIVPAFPWTPS SAEALVMKSEVRQYVTETRAAYV++R+ATQRPHARDCGTTPELCDCDFAPERCT+VPAFPWHP SSAEALVLK EVRHYIADTLTRYRNHRFALQRPHARDCGTTPELCNCDF PERCTIVP+F WAPSTSA+ALV+KAEVRSY++ETRAAYV  RFALQ+PHARDCGT PELCDCDLAPERC IVPAFPWTPSTSAEAL+LKSEVREYIAKTRSLYIHHRFA QRPHARDCGTTPEL XXXXXXXXX      VWGAASAAEFVA AEAR YIAELSAEMQ SRERNGAGMWHYDRTSPPD C                                                                                                             SLLLAVLIY+MV PRVCEA RR RCMRAVAK          D PVT+RLRGCAPCCG GGALFGWRAD++LLLLRALGVAAPPLALA SVDGTAWLLRL SRAAADALVRSVGAAAGAAP  FGALAADLLSTDVKEGAPTEVALLRGVPL++R                    D CDALRVT+FLARAGVHVSAVARYT+DGGGWLVAVPAGSYAL AVF LI+ V+ FA QDVSRY V+IRELVD DGALLP    PAA AAAAV A  P+TPASV V TDDA GRAG AEGDAP
Sbjct:   38 MLQAAVMATQPDFVGPPEGARLLRQSDDGTTSTVPPPSLGSDASTDIAAYMTAFVDATATYVAPVVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYSAMSVEARVNRYNQRAAVVTRLEGTPRLPSDADCLHEPETCLAACTGMNPSTTAEGLVLKSEVREYIAKTRSLYVHHRFATQRPHARDCGTTPELCXXXXXXXRCTIVPAFPWTPSTSAEALVMKSEVRQYVTETRAAYVKFRYATQRPHARDCGTTPELCDCDFAPERCTVVPAFPWHPVSSAEALVLKAEVRHYIADTLTRYRNHRFALQRPHARDCGTTPELCNCDFTPERCTIVPAFPWAPSTSAEALVLKAEVRSYVTETRAAYVNHRFALQRPHARDCGTMPELCDCDLAPERCPIVPAFPWTPSTSAEALLLKSEVREYIAKTRSLYIHHRFATQRPHARDCGTTPELCXXXXXXXXXQLAPAPVWGAASAAEFVALAEARVYIAELSAEMQRSRERNGAGMWHYDRTSPPDCCDGSGVFRDGCSSRLCQALLYFAIEVETCSHKNIIADTTFNVQISACVICGACVLNDAASNYMTIARGFRDLVVLAVTPLWAFYDTFVLLGRDAVAYVIRLAASASSLPESLLLAVLIYVMVKPRVCEAFRRLRCMRAVAK----------DGPVTLRLRGCAPCCGSGGALFGWRADEILLLLRALGVAAPPLALAPSVDGTAWLLRLRSRAAADALVRSVGAAAGAAPCFFGALAADLLSTDVKEGAPTEVALLRGVPLRRRGGSWFWCSGGGGDGSSGSGGDECDALRVTEFLARAGVHVSAVARYTEDGGGWLVAVPAGSYALGAVFNLISQVYCFARQDVSRYAVSIRELVDADGALLPLVAVPAAAAAAAVVA--PNTPASVRVDTDDAIGRAGDAEGDAP 965

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350860 vs. uniprot

BLAST of jgi.p|Trimin1|350860 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836C8J8_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YNH9_9STRA	0.000e+0	73.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 877..918
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_74	contig	Contig_74:385830..401926 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350860	mRNA_10555	Tribonema minus UTEX_B_3156	mRNA	Contig_74 385830..405287 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350860|estExt_Genemark1.C_Ctg_740044 ID=Trimin1|350860|estExt_Genemark1.C_Ctg_740044|Name=jgi.p|Trimin1|350860|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=966bp
MRYGHRDIGAAGGIATQPDFVGPPEGARLLRQSDDGAISTVPPPPLDSDA
STDIAAYMTAFVDATATYVAPVVKGITTPSARGPLQVLQAAVIATQPEFV
GPPEGARLLRQSDDAATSTDPPPSLGSGASTDIAAYVTAFVDATATYVAP
VVKGLTTPSAWGPLARTCQRKGSEWVAHKRHNYTLDWCRANAKCPLADYS
AMSIEARVTRYNERAAKVTRLEGTPRLPSDADCLHEAETCLAAVYRNPSV
SAEAIVLKSELRQHVHDTIARYRNHRFATQRPHARDCGTTPELCDCDFAP
ERCTIVPAFPWTPSASAEALVMKSEVRQYVTETRAAYVQYRFATQRPHAR
DCGTTPELCDCDFAPERCTIVPAFPWHPSSSAEALVLKTEVRHYIADTLT
RYRNHRFALQRPHARDCGTTPELCNCDFAPERCTIVPSFTWAPSTSAQAL
VMKAEVRSYISETRAAYVKLRFALQQPHARDCGTTPELCDCDLAPERCAI
VPAFPWTPSTSAEALVLKSEVREYIAKTRSLYIHHRFALQRPHARDCGTT
PELCDCGFAPERCQLAPAPVWGAASAAEFVARAEARAYIAELSAEMQWSR
ERNGAGMWHYDRTSPPDWCSLLLAVLIYMMVAPRVCEAVRRSRCMRAVAK
AEEIWEAHTKDRPVTMRLRGCAPCCGGGALFGWRADKVLLLLRALGVAAP
PLALAASVDGTAWLLRLPSRAAADALVRSVGAAAGAAPHLFGALAADLLS
TDVKEGAPTEVALLRGVPLQQRRGGWWRRCGIGGGGGGDVCDALRVTDFL
ARAGVHVSAVARYTKDGGGWLVAVPAGSYALEAVFTLINHVHRFACQDVS
RYGVNIRELVDTDGALLPPAAEAAAAVAASTPDTPASVPVHTDDAGGRAG
AAEGDAPAAGGGEGRNVDVDVDTGVEVADGAGQVDNKDAAVEVMGEGAGE
GRAVGAGAAGAAVGG*