Trimin1|350793|estExt_Genemark1.C_Ctg_720037 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350793
Unique NameTrimin1|350793|estExt_Genemark1.C_Ctg_720037
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length372
Homology
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A836C8P0_9STRA (Vta1 like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P0_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 3.520e-221
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLPDKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGPVGQAADQGSTGSAPPNLLGGSEASAPPAFAAAGAALADSVNYNIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALADSAPAAPPQTSFYGETVDTGSGAMSSYPASASISAEQNEGKQQQPSPYVDMAAAXXXXXXXRHVAPTAPSPAYSASGSTNAGSRSGGSAAAVKANAIADATEYAKFAIAALEHKDMNLARQRLQAALDCLR 371
            MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLPDKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGPVGQAADQGSTGSAPPNLLGGSEASAPPAFAAAGAALADSVNYNIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALADSAPAAPPQTSFYGETVDTGSGAMSSYPASASISAEQNEGKQQQPSPYVDMAAAXXXXXXXRHVAPTAPSPAYSASGSTNAGSRSGGSAAAVKANAIADATEYAKFAIAALEHKDMNLARQRLQAALDCLR
Sbjct:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLPDKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGPVGQAADQGSTGSAPPNLLGGSEASAPPAFAAAGAALADSVNYNIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALADSAPAAPPQTSFYGETVDTGSGAMSSYPASASISAEQNEGKQQQPSPYVDMAAAXXXXXXXRHVAPTAPSPAYSASGSTNAGSRSGGSAAAVKANAIADATEYAKFAIAALEHKDMNLARQRLQAALDCLR 371          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A8J5JH99_9STRA (Vta1 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JH99_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.400e-44
Identity = 80/164 (48.78%), Postives = 115/164 (70.12%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
            + +PP  K ++PF+RRAEELDRD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLED+K  LP    +  ++ C  FAL++F +ADDEDRAG+A+ STA+ F+AAG FFDIL+QF  +   E+   K++Y K KA  ILKA++ G+TPTPGP
Sbjct:    5 VKVPPTFKTLLPFIRRAEELDRDTSRPESKLIAYFCRQYAMEMGIKLRENDASNESTDYLLSLMDRLEDEKNKLPDFTQEEGKEICEDFALEIFSKADDEDRAGMANKSTARTFYAAGTFFDILSQFGDI--SEDVAEKRRYCKYKAATILKAIKEGKTPTPGP 166          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A3R7IJD0_9STRA (Vta1 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IJD0_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.030e-42
Identity = 78/164 (47.56%), Postives = 114/164 (69.51%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
            + +PP  K ++PFVRRAEELDRD S  E+K++AY+CR +A E+G+ L   D   +    +++L+ RLED+K  LP    +  ++ C  FA+++F +ADDEDRAG+A  STA+ F+AAG FFDIL QF  +   ++ + K++Y K KA  ILKA++ G+TPTPGP
Sbjct:    7 VKVPPTFKALLPFVRRAEELDRDTSRPESKLIAYFCRQYAMELGIKLRENDASNDTTDYLLSLMDRLEDEKNKLPDFTQEEGKEICEDFAMEIFSKADDEDRAGMASKSTARTFYAAGTFFDILNQFGDI--SDDIVEKRRYCKYKAATILKAIKEGQTPTPGP 168          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A329T423_9STRA (Vta1 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T423_9STRA)

HSP 1 Score: 161 bits (407), Expect = 1.650e-42
Identity = 85/182 (46.70%), Postives = 124/182 (68.13%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGPVG----QAADQGSTGSAP 176
            + +PP  K ++PF+RRAEELDRD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLED+K  LP    +  ++ C  FAL++F +ADDEDRAG+A+ STA+ F+AAG FFDIL+QF  +   E+   K++Y K KA  ILKA++ G+TPTPGP      ++A+ GS  +AP
Sbjct:    5 VKVPPTFKTLLPFIRRAEELDRDTSRPESKLIAYFCRQYAMEMGIKLRENDASNESTDYLLSLMDRLEDEKNKLPDFTQEEGKEICEDFALEIFSKADDEDRAGMANKSTARTFYAAGTFFDILSQFGDI--SEDVAEKRRYCKYKAATILKAIKEGKTPTPGPPEGLDMKSAEDGSDDAAP 184          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A0W8AZU1_PHYNI (Vacuolar protein sorting-associated protein VTA1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8AZU1_PHYNI)

HSP 1 Score: 158 bits (399), Expect = 2.420e-42
Identity = 79/164 (48.17%), Postives = 114/164 (69.51%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
            + +PP  K ++PF+RRAEELDRD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLED+K  LP    +  ++ C  FA+++F +ADDEDRAGLA+  TA+ F+AAG FFDIL QF  +   E+ + K++Y K KA  ILKA++ G+TPTPGP
Sbjct:    7 VKVPPTFKTLLPFIRRAEELDRDTSRPESKLIAYFCRQYAMELGIKLRENDASNEATDYLLSLMDRLEDEKNKLPDFTQEEGKEICEDFAMEIFSKADDEDRAGLANKGTARTFYAAGTFFDILNQFGDI--SEDVVEKRRYCKYKAATILKAIKEGKTPTPGP 168          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A2D4BVN9_PYTIN (Vacuolar protein sortingassociated protein VTA1 put (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVN9_PYTIN)

HSP 1 Score: 158 bits (399), Expect = 6.860e-42
Identity = 135/381 (35.43%), Postives = 175/381 (45.93%), Query Frame = 0
Query:    2 NIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGPVGQ--AADQGSTGSAPPNLLGGSEASAPPAFAAAGAALADSVNYNIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALADSAPAAPPQT-------SFYGETVDTGSGAMSSYPASASISAEQNEGKQQQPSPYVDMAAAXXXXXXXRHVAPTAPSPAYSASGSTNAGSRSGGSAAAVKANAIADATEYAKFAIAALEHKDMNLARQRLQAALDCLR 371
             IP   K ++PF+RRAEELDRD +  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLEDDK  LP    +  ++ C  FAL+VF +ADDEDRAG AD +TA+ F+AAG F DIL QF +V   E+ L K++Y K KA  ILKA++ G+ PTPGP  +    D   T +  PN  G                + D  N  I                                 A  AP AP Q        SF      TG    S   + A  +  Q       PS +    AA          A T P PA                      N I DA E AKFAIAAL+ KD+ LA QRL+ AL C+R
Sbjct:    4 KIPATFKSVLPFIRRAEELDRDTTRPESKLIAYFCRQYAMELGIKLRENDNSNEATNYLLSLMDRLEDDKSKLPVFTQEEGKEICEDFALEVFAKADDEDRAGHADKNTARTFYAAGTFLDILNQFGEV--SEDILEKRRYCKFKAATILKAIKEGQVPTPGPPSEHDTTDSVKTEAPVPNASGDDHP------------MPDVSNVKIE--------------------------------ASPAPVAPEQIQSISAFPSFTQSASITGPFGTSMNESFAPSAPTQPPSNWSSPSQFQHQPAAHFH-------ARTRPGPASQ--------------------NEINDAIECAKFAIAALKVKDVELAVQRLEMALRCIR 311          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: H3HDB6_PHYRM (Vta1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDB6_PHYRM)

HSP 1 Score: 155 bits (391), Expect = 7.860e-42
Identity = 78/164 (47.56%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
            + +PP  KP++PFVRRAEELDRD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLE +K  LP    +  ++ C  FA+++F +ADDEDRAG+A+ STA+ F+AAG FFDIL QF  +   ++   K++Y K KA  ILKA++ G+TP PGP
Sbjct:    7 VKVPPAFKPLLPFVRRAEELDRDTSRPESKLIAYFCRQYAMEMGIKLRENDASNEATDYLLSLMDRLETEKNNLPDFTQEEGKEICEDFAIEIFSKADDEDRAGMANKSTARTFYAAGTFFDILNQFGDI--SDDVAEKRRYCKYKAATILKAIKEGKTPEPGP 168          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A0P1AG58_PLAHL (Hydroxyproline-rich glycoprotein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AG58_PLAHL)

HSP 1 Score: 160 bits (405), Expect = 1.280e-41
Identity = 81/164 (49.39%), Postives = 116/164 (70.73%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
            + IPP  K ++PF+RRAEELDRD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLE++KK LP+   +  ++ C  FA ++F +ADDEDRAG A+ STA+ F+AAG FFDIL QF  +P  E+ + K++Y K KA  ILKA++ G+TPTPGP
Sbjct:   10 VRIPPTFKTLLPFIRRAEELDRDTSRPESKLIAYFCRQYAMELGIKLRENDVSNESTDYLLSLMDRLENEKKSLPEFTQEEGKEICEDFATEIFSKADDEDRAGKANKSTARTFYAAGTFFDILTQFGDIP--EDIVEKRRYCKYKAATILKAVKEGKTPTPGP 171          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: D0MXZ0_PHYIT (Vacuolar protein sorting-associated protein VTA1 n=3 Tax=Phytophthora TaxID=4783 RepID=D0MXZ0_PHYIT)

HSP 1 Score: 158 bits (400), Expect = 1.320e-41
Identity = 79/164 (48.17%), Postives = 115/164 (70.12%), Query Frame = 0
Query:    1 MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
            + +PP  K ++PF+RRAEELDRD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLE++K  LP    +  ++ C  FA+++F +ADDEDRAG+A  STA+ F+AAG FFDIL+QF    L E+ + K++Y K KA  ILKA++ G+TPTPGP
Sbjct:    6 VKVPPTFKTLLPFIRRAEELDRDTSRPESKLIAYFCRQYAMELGIKLRENDSSNEATDYLLSLMDRLEEEKNKLPDFTQEEGKEICEDFAMEIFSKADDEDRAGMATKSTARTFYAAGTFFDILSQFGD--LSEDVVEKRRYCKFKAATILKAIKEGKTPTPGP 167          
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Match: A0A8K1CU29_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU29_PYTOL)

HSP 1 Score: 158 bits (400), Expect = 2.170e-41
Identity = 84/163 (51.53%), Postives = 112/163 (68.71%), Query Frame = 0
Query:    2 NIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLP--DKGPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDRAGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILKALRSGRTPTPGP 162
             IPP  K ++PF+RRAEEL+RD S  E+K++AY+CR +A E+G+ L   D   E    +++L+ RLEDDK  LP  + D  ++ C  FAL++F +ADDEDRAG AD +TA+ F+AAG FFDIL QF  VP D E   K++Y K KA  ILKA++ G  PTPGP
Sbjct:   22 KIPPTFKTLLPFIRRAEELERDTSRPESKLIAYFCRQYAMELGIKLRENDNSNEATNYLLSLMDRLEDDKGKLPTFSQDEGKEICEDFALEIFTKADDEDRAGCADKNTARTFYAAGTFFDILNQFGDVPEDIE--EKRRYCKYKAATILKAIKEGVAPTPGP 182          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350793 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8P0_9STRA3.520e-221100.00Vta1 like-domain-containing protein n=1 Tax=Tribon... [more]
A0A8J5JH99_9STRA2.400e-4448.78Vta1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3R7IJD0_9STRA1.030e-4247.56Vta1 domain-containing protein n=3 Tax=Phytophthor... [more]
A0A329T423_9STRA1.650e-4246.70Vta1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A0W8AZU1_PHYNI2.420e-4248.17Vacuolar protein sorting-associated protein VTA1 n... [more]
A0A2D4BVN9_PYTIN6.860e-4235.43Vacuolar protein sortingassociated protein VTA1 pu... [more]
H3HDB6_PHYRM7.860e-4247.56Vta1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A0P1AG58_PLAHL1.280e-4149.39Hydroxyproline-rich glycoprotein n=1 Tax=Plasmopar... [more]
D0MXZ0_PHYIT1.320e-4148.17Vacuolar protein sorting-associated protein VTA1 n... [more]
A0A8K1CU29_PYTOL2.170e-4151.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 353..371
NoneNo IPR availableGENE3D1.20.5.420Immunoglobulin FC, subunit Ccoord: 328..371
e-value: 3.8E-6
score: 28.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..186
IPR023175Vta1/Callose synthase, N-terminal domain superfamilyGENE3D1.25.40.270coord: 1..158
e-value: 3.6E-42
score: 145.9
IPR039431Vta1/callose synthase, N-terminalPFAMPF04652Vta1coord: 10..153
e-value: 4.9E-33
score: 114.1
IPR044538Vacuolar protein sorting-associated protein Vta1-likePANTHERPTHR46009VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOGcoord: 2..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_72contigContig_72:416086..422226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350793mRNA_13450Tribonema minus UTEX_B_3156 mRNAContig_72 415916..422578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350793|estExt_Genemark1.C_Ctg_720037 ID=Trimin1|350793|estExt_Genemark1.C_Ctg_720037|Name=jgi.p|Trimin1|350793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=372bp
MNIPPKCKPMVPFVRRAEELDRDDSGLETKVVAYYCRLHAAEVGLGLPDK
GPEEEQCIMALVMRLEDDKKVLPQEALDNAQQTCRQFALDVFQRADDEDR
AGLADNSTAKAFHAAGVFFDILAQFRKVPLDEECLVKKKYAKAKAMDILK
ALRSGRTPTPGPVGQAADQGSTGSAPPNLLGGSEASAPPAFAAAGAALAD
SVNYNIADQSSTGSAPPSLMGSSEASAPPGFAAAGGAALADSAPAAPPQT
SFYGETVDTGSGAMSSYPASASISAEQNEGKQQQPSPYVDMAAAQPSPQP
QRHVAPTAPSPAYSASGSTNAGSRSGGSAAAVKANAIADATEYAKFAIAA
LEHKDMNLARQRLQAALDCLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023175Vta1/CALS_N_sf
IPR039431Vta1/CALS_N
IPR044538Vta1-like