Trimin1|350770|estExt_Genemark1.C_Ctg_710056 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350770
Unique NameTrimin1|350770|estExt_Genemark1.C_Ctg_710056
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length511
Homology
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A836C8R4_9STRA (Ferritin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8R4_9STRA)

HSP 1 Score: 790 bits (2041), Expect = 4.450e-285
Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0
Query:    1 MMFMRGGAAGVAAAAMATGAAAFSTGGTALLRRAPIAAASRMTMSSTSGVTAKDIANGASMEKLQRQSRIKDDMKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSKDLTQVMDINLKSGVPPGQSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA 510
            MMFMRGGAAGVAAAAMATGAAAFSTGGTALLRRAPIAAASRMTMSSTSGVTAKDIANGASMEKLQRQSRIKDDMKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSKDLTQVMDINLKSGVPPGQSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA
Sbjct:    1 MMFMRGGAAGVAAAAMATGAAAFSTGGTALLRRAPIAAASRMTMSSTSGVTAKDIANGASMEKLQRQSRIKDDMKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSKDLTQVMDINLKSGVPPGQSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA 510          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A836CBM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM6_9STRA)

HSP 1 Score: 368 bits (944), Expect = 2.440e-114
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0
Query:  303 AGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA 510
            AGSRTQSDSLRLQDSSPP GTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA
Sbjct:   44 AGSRTQSDSLRLQDSSPPRGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA 251          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A835ZFE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFE5_9STRA)

HSP 1 Score: 357 bits (917), Expect = 5.020e-111
Identity = 190/208 (91.35%), Postives = 194/208 (93.27%), Query Frame = 0
Query:  303 AGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA 510
            AGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPD            +GRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWA+LVEHATRLLADAT+SAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARL ALLSGDFAELLRKTLSAAAALRAPKPNNAA A+A
Sbjct:  467 AGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDDA----------AGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWAQLVEHATRLLADATESAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLTALLSGDFAELLRKTLSAAAALRAPKPNNAATAAA 664          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A835Z1U2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U2_9STRA)

HSP 1 Score: 337 bits (865), Expect = 1.160e-104
Identity = 189/192 (98.44%), Postives = 191/192 (99.48%), Query Frame = 0
Query:  319 PPHGTAVGWADMDVDPPDXXXXXXXXXXXXSGRPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAAMASA 510
            PPHGTAVGWADMD+DPPDXXXXXXXXXXXXSGRPSKPQ+RASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAA ASA
Sbjct:  333 PPHGTAVGWADMDLDPPDXXXXXXXXXXXXSGRPSKPQSRASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQCTQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYRLLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAPKPNNAATASA 524          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: Q2FQC4_METHJ (Ferritin and Dps n=3 Tax=Euryarchaeota TaxID=28890 RepID=Q2FQC4_METHJ)

HSP 1 Score: 92.4 bits (228), Expect = 3.340e-18
Identity = 52/146 (35.62%), Postives = 91/146 (62.33%), Query Frame = 0
Query:   74 MKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSK 219
            ++  L EQ + E+ ++  YLSMS WFD  G+ GF ++ R Q+ EER H+++  D++  RG  + +   + ++ P+TE++ A  A ET +A E  V   IN+  + ++  KD  TV+FLQ FV  Q+EEE+ A ++++Q+  +++ K
Sbjct:    8 VEKALNEQINAELYSAYLYLSMSSWFDSVGLRGFANWERVQAMEERDHALKIFDYVLARGGRAVM---QQIEAPQTEWRDAKDAFETQMAHELKVTSLINNLVNLSITEKDHATVNFLQWFVNEQVEEEENARTILDQLQMISQEK 150          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A7K4B3H5_9EURY (Ferritin n=1 Tax=Methanomicrobiales archaeon TaxID=2184052 RepID=A0A7K4B3H5_9EURY)

HSP 1 Score: 90.9 bits (224), Expect = 1.080e-17
Identity = 58/170 (34.12%), Postives = 98/170 (57.65%), Query Frame = 0
Query:   73 DMKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSKD--LTQVMDINL--KSGVPPGQS 238
            +++  L EQ + E+ ++  YLSMS WFD  G+ GF ++ R Q+ EER H+++  D++  RG  + +   K +  P+ ++  A    ET +A E  V   IN     ++  KD  TV+FLQ FV  Q+EEE+ A ++++Q+  +++ K   L  ++D  L  ++ VPPG S
Sbjct:    4 EVEKALNEQINAELYSAYLYLSMSAWFDYAGLRGFANWERIQAMEERDHALKIFDYVLARGGRAVM---KQIDAPKADWTDAKDVFETQMAHEIKVTGLINDLVDLSISEKDHATVNFLQWFVNEQVEEEENARNILDQLKMISQEKGAGLLYMLDKELGTRTYVPPGTS 170          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A2V2N503_9EURY (Ferritin n=2 Tax=Methanospirillum stamsii TaxID=1277351 RepID=A0A2V2N503_9EURY)

HSP 1 Score: 90.9 bits (224), Expect = 1.160e-17
Identity = 53/146 (36.30%), Postives = 88/146 (60.27%), Query Frame = 0
Query:   74 MKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSK 219
            ++  L EQ + E+ +S  YLSMS WFD  G+ GF ++ R Q+ EE+ H+++  D+L  RG  + +T    +  P++ +     A ET LA E  V + IN+  + ++  KD  T++FLQ FV  Q+EEED A +++EQ+  +++ K
Sbjct:    8 VEKALNEQINAELYSSYLYLSMSSWFDSVGLRGFANWERIQAMEEKDHAMKIFDYLLTRGGRAVMTK---IDAPQSVWNNPKDAFETQLAHELKVTNLINNLVNLSITEKDHATLNFLQWFVNEQVEEEDNARTILEQISMISQEK 150          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A7K4BC43_9EURY (Ferritin n=1 Tax=Methanomicrobiales archaeon TaxID=2184052 RepID=A0A7K4BC43_9EURY)

HSP 1 Score: 89.7 bits (221), Expect = 2.750e-17
Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   74 MKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSK 219
            ++  L  Q + E  ++  YLSMS WFD  G+ GF ++ R Q+ EER H+++  D++  RG  + +T    +  P++ ++  L   ET  A ER V   IN   + +   KD  TV+FLQ FV  Q+EEED A ++++QV  +++ K
Sbjct:    5 VETALNNQINAEFYSAYLYLSMSSWFDSIGLRGFANWERIQAMEERDHAMKIFDYVLTRGGRALMTQ---INTPQSSWKDVLDVFETQYAHERIVTSLINDLVNLSTSQKDHATVNFLQWFVNEQVEEEDNARTILDQVKLISQEK 147          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A7X7E181_9BACT (Ferritin n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7X7E181_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 5.130e-17
Identity = 53/146 (36.30%), Postives = 89/146 (60.96%), Query Frame = 0
Query:   74 MKNMLLEQAHIEMSASLAYLSMSYWFDREGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSK 219
            ++  L EQ + E+ ++  YLSMS WFD  G++GF ++ R Q+ EER H+++ LD+L  RG  + +T    +  P++ ++ A  A ET L+ E  V   I+S    ++  KD  TV+FLQ FV  Q+EEE+ A ++++Q+  ++  K
Sbjct:    5 VEKALNEQINAELYSAYLYLSMSSWFDATGLKGFSNWERIQTMEERDHAMKILDYLLARGGRAIMTQ---IDTPQSTWKDAKDAFETQLSHELKVTSLIHSLMDLSIAEKDHATVNFLQWFVNEQVEEEENARTILDQLKMISVEK 147          
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Match: A0A4U1CFX4_9SPHI (Ferritin n=5 Tax=Pedobacter TaxID=84567 RepID=A0A4U1CFX4_9SPHI)

HSP 1 Score: 89.0 bits (219), Expect = 5.660e-17
Identity = 57/175 (32.57%), Postives = 97/175 (55.43%), Query Frame = 0
Query:   70 IKDDMKNMLLEQAHIEMSASLAYLSMSYWFDRE-GMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETEFQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIEEEDEADSMMEQVYRLTKSKDLTQVMD---INLKSGVPPGQSEG 240
            + + M N L EQ  IE  +S  YL+++ W + + G+EG+ +FF KQSDEER H ++F+ +++ R    AI P+  L  P+  +Q  +     +L  E  V+ SIN+    A++ KD+ T  FLQ ++  Q+EEE  A +M+E++  +   +     +D   + L+  V   + EG
Sbjct:    3 LSERMLNALNEQVKIEAESSQVYLAVASWLETQPGLEGYTEFFYKQSDEERHHMLKFMHYINDRDG-HAIIPA--LAMPQNNYQQVIDVFRDFLKNELEVSQSINNLVELALNEKDYLTFKFLQWYLDEQLEEEKMAKTMLEKLELVGSDRGGVYQLDKDIVGLRKKVSDTKEEG 174          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350770 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8R4_9STRA4.450e-285100.00Ferritin n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
A0A836CBM6_9STRA2.440e-11499.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFE5_9STRA5.020e-11191.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z1U2_9STRA1.160e-10498.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
Q2FQC4_METHJ3.340e-1835.62Ferritin and Dps n=3 Tax=Euryarchaeota TaxID=28890... [more]
A0A7K4B3H5_9EURY1.080e-1734.12Ferritin n=1 Tax=Methanomicrobiales archaeon TaxID... [more]
A0A2V2N503_9EURY1.160e-1736.30Ferritin n=2 Tax=Methanospirillum stamsii TaxID=12... [more]
A0A7K4BC43_9EURY2.750e-1735.62Ferritin n=1 Tax=Methanomicrobiales archaeon TaxID... [more]
A0A7X7E181_9BACT5.130e-1736.30Ferritin n=3 Tax=cellular organisms TaxID=131567 R... [more]
A0A4U1CFX4_9SPHI5.660e-1732.57Ferritin n=5 Tax=Pedobacter TaxID=84567 RepID=A0A4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008331Ferritin/DPS protein domainPFAMPF00210Ferritincoord: 77..212
e-value: 5.2E-26
score: 91.3
IPR012347Ferritin-likeGENE3D1.20.1260.10coord: 65..241
e-value: 3.0E-38
score: 133.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..318
NoneNo IPR availablePANTHERPTHR11431:SF4BACTERIAL NON-HEME FERRITINcoord: 71..232
IPR001519FerritinPANTHERPTHR11431FERRITINcoord: 71..232
IPR009040Ferritin-like diiron domainPROSITEPS50905FERRITIN_LIKEcoord: 68..216
score: 27.516216
IPR041719Ferritin, prokaryotic-typeCDDcd01055Nonheme_Ferritincoord: 71..212
e-value: 4.98835E-44
score: 150.715
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 70..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_71contigContig_71:528943..536058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350770mRNA_12421Tribonema minus UTEX_B_3156 mRNAContig_71 528936..536058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350770|estExt_Genemark1.C_Ctg_710056 ID=Trimin1|350770|estExt_Genemark1.C_Ctg_710056|Name=jgi.p|Trimin1|350770|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=511bp
MMFMRGGAAGVAAAAMATGAAAFSTGGTALLRRAPIAAASRMTMSSTSGV
TAKDIANGASMEKLQRQSRIKDDMKNMLLEQAHIEMSASLAYLSMSYWFD
REGMEGFRDFFRKQSDEERGHSIQFLDFLSKRGAVSAITPSKLLKDPETE
FQTALHAMETYLALERFVADSINSKYSKAMDAKDWPTVSFLQPFVAYQIE
EEDEADSMMEQVYRLTKSKDLTQVMDINLKSGVPPGQSEGGGAGSDGAAA
AAGAAAATPPKLPAVPASGAANSKSSKKRPAATATGAQRRRRTAAAAAPP
SSAGSRTQSDSLRLQDSSPPHGTAVGWADMDVDPPDDAASPPPPTTTTSG
RPSKPQARASLAWDLSTPSVVHALDQTNEADLLLLRFTTTANPFRTQLQC
TQWARLVEHATRLLADATDSAREAARVRLHHGAGAFAHQVSQTLVQRGYR
LLHLLAAMAFGRQPEGTGMPPAARLAALLSGDFAELLRKTLSAAAALRAP
KPNNAAMASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008331Ferritin_DPS_dom
IPR012347Ferritin-like
IPR001519Ferritin
IPR009040Ferritin-like_diiron
IPR041719Ferritin_prok
IPR009078Ferritin-like_SF