Trimin1|350766|estExt_Genemark1.C_Ctg_710047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350766
Unique Name	Trimin1\|350766\|estExt_Genemark1.C_Ctg_710047
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	465

Homology

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BLAST of jgi.p|Trimin1|350766 vs. uniprot
Match: A0A835YKX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX2_9STRA)

HSP 1 Score: 680 bits (1755), Expect = 4.510e-243
Identity = 464/464 (100.00%), Postives = 464/464 (100.00%), Query Frame = 0

Query:    1 MDADGFVLVDANGYATGKTFGLSGRTASTSGKMPARIATASDTDSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGILAAVKNSLAGSRALGGDYFHVHFADAAAHALEQRGWGSFLADRVRPMYKSSKKRARKLARGARKRFYGGSAWSSKDAGASSPPPLLPRRRPREINWHACAVSAIVLLAAAMVTAAVYAVALKVSAAALPVTVVGPTGRTTTLTLRTYSTLAAAEARVARAIPGSSADPDAVASPETVPWRLYHEEQRLEDSSRSLESYGVRPGAELSAVAAVRVRVNIYDKATVPTGKKGSTDSGARNLPIEGAEGGHEDTYDSYGRHQLWHQGNRLNDAQILYNYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSDEIVSCELDFASVTPVTAAGVLTVTATTLLWAGYALMFGAPLGL 464
            MDADGFVLVDANGYATGKTFGLSGRTASTSGKMPARIATASDTDSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGILAAVKNSLAGSRALGGDYFHVHFADAAAHALEQRGWGSFLADRVRPMYKSSKKRARKLARGARKRFYGGSAWSSKDAGASSPPPLLPRRRPREINWHACAVSAIVLLAAAMVTAAVYAVALKVSAAALPVTVVGPTGRTTTLTLRTYSTLAAAEARVARAIPGSSADPDAVASPETVPWRLYHEEQRLEDSSRSLESYGVRPGAELSAVAAVRVRVNIYDKATVPTGKKGSTDSGARNLPIEGAEGGHEDTYDSYGRHQLWHQGNRLNDAQILYNYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSDEIVSCELDFASVTPVTAAGVLTVTATTLLWAGYALMFGAPLGL
Sbjct:    1 MDADGFVLVDANGYATGKTFGLSGRTASTSGKMPARIATASDTDSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGILAAVKNSLAGSRALGGDYFHVHFADAAAHALEQRGWGSFLADRVRPMYKSSKKRARKLARGARKRFYGGSAWSSKDAGASSPPPLLPRRRPREINWHACAVSAIVLLAAAMVTAAVYAVALKVSAAALPVTVVGPTGRTTTLTLRTYSTLAAAEARVARAIPGSSADPDAVASPETVPWRLYHEEQRLEDSSRSLESYGVRPGAELSAVAAVRVRVNIYDKATVPTGKKGSTDSGARNLPIEGAEGGHEDTYDSYGRHQLWHQGNRLNDAQILYNYCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSDEIVSCELDFASVTPVTAAGVLTVTATTLLWAGYALMFGAPLGL 464

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350766 vs. uniprot

BLAST of jgi.p|Trimin1|350766 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YKX2_9STRA	4.510e-243	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 337..359

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_71	contig	Contig_71:427544..431591 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350766	mRNA_12412	Tribonema minus UTEX_B_3156	mRNA	Contig_71 427544..431591 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350766|estExt_Genemark1.C_Ctg_710047 ID=Trimin1|350766|estExt_Genemark1.C_Ctg_710047|Name=jgi.p|Trimin1|350766|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=465bp
MDADGFVLVDANGYATGKTFGLSGRTASTSGKMPARIATASDTDSMSSSG
DSSLASSTTSGGENDTCGGSNAGGGDGVGAGGDGDAVNSSGSGSGDAAEG
DGECGDGILAAVKNSLAGSRALGGDYFHVHFADAAAHALEQRGWGSFLAD
RVRPMYKSSKKRARKLARGARKRFYGGSAWSSKDAGASSPPPLLPRRRPR
EINWHACAVSAIVLLAAAMVTAAVYAVALKVSAAALPVTVVGPTGRTTTL
TLRTYSTLAAAEARVARAIPGSSADPDAVASPETVPWRLYHEEQRLEDSS
RSLESYGVRPGAELSAVAAVRVRVNIYDKATVPTGKKGSTDSGARNLPIE
GAEGGHEDTYDSYGRHQLWHQGNRLNDAQILYNYCSGGGNTNDSSNSKVG
GSSSASSGGTSGGGGDGGDSDEIVSCELDFASVTPVTAAGVLTVTATTLL
WAGYALMFGAPLGL*