Trimin1|350616|estExt_Genemark1.C_Ctg_670075 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350616
Unique NameTrimin1|350616|estExt_Genemark1.C_Ctg_670075
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length361
Homology
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BLAST of jgi.p|Trimin1|350616 vs. uniprot
Match: A0A835YNJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ1_9STRA)

HSP 1 Score: 585 bits (1508), Expect = 6.640e-209
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0 
Query:    1 MAVANSADASPSGDNSSGXXXXXSSDSMVNSISTVSEDIRXXXXXXXXXXXXXXXXXXXXXXXXGVIQGGKDADDQPFPDEYLGMKSKDPQLRDHLSQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAQKELQHQKQLGANPGVQLLDEVQPFTEFVSSGIKVLKFLEKDRMPQHYFVDSYDAVGFCRKFVAATKTPHWVKPHAVITGLAKLGKSTVLNYVLAAVIREMCPDALIWRYEVGPIGRGGRPVFVLIDEVQRFFTKYDERHDNYSPPSFIFKRLVSPSTMGPPSEVYMAVTGSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVNEDEQGGLSKKCRERADFVIELPEPSTM 360
            MAVANSADASPSGDNSSGXXXXXSSDSMVNSISTVSEDIRXXXXXXXXXXXXXXXXXXXXXXXXGVIQGGKDADDQPFPDEYLGMKSKDPQLRDHLSQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAQKELQHQKQLGANPGVQLLDEVQPFTEFVSSGIKVLKFLEKDRMPQHYFVDSYDAVGFCRKFVAATKTPHWVKPHAVITGLAKLGKSTVLNYVLAAVIREMCPDALIWRYEVGPIGRGGRPVFVLIDEVQRFFTKYDERHDNYSPPSFIFKRLVSPSTMGPPSEVYMAVTGSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVNEDEQGGLSKKCRERADFVIELPEPSTM
Sbjct:    1 MAVANSADASPSGDNSSGXXXXXSSDSMVNSISTVSEDIRXXXXXXXXXXXXXXXXXXXXXXXXGVIQGGKDADDQPFPDEYLGMKSKDPQLRDHLSQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAQKELQHQKQLGANPGVQLLDEVQPFTEFVSSGIKVLKFLEKDRMPQHYFVDSYDAVGFCRKFVAATKTPHWVKPHAVITGLAKLGKSTVLNYVLAAVIREMCPDALIWRYEVGPIGRGGRPVFVLIDEVQRFFTKYDERHDNYSPPSFIFKRLVSPSTMGPPSEVYMAVTGSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVNEDEQGGLSKKCRERADFVIELPEPSTM 360
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BLAST of jgi.p|Trimin1|350616 vs. uniprot
Match: A0A835Z7A6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.970e-11
Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 0 
Query:  245 IGRGGRPVFVLIDEVQRFFTK-YDER-HDNYSPPSFIFKRLVSPSTMGPPSEVYMAVTGSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVN 333
            +  GGR VF+LIDE+QRFF     ER    Y  P+  FK LVS S     + V +AVTGSS+ QAW  FS A P+ HT + AR +LTIPVN
Sbjct:   86 LDEGGRHVFILIDEIQRFFNDDVSERLRLGYCSPADFFKDLVSLSQRR--NRVAVAVTGSSLVQAWMSFSEAAPNDHTLAGARRMLTIPVN 174
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BLAST of jgi.p|Trimin1|350616 vs. uniprot
Match: A0A836CIZ1_9STRA (Utp13 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 8.280e-11
Identity = 47/87 (54.02%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:  249 GRPVFVLIDEVQRFFTK-YDER-HDNYSPPSFIFKRLVSPSTMGPPSEVYMAVTGSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVN 333
            GR +F+L+DE+Q FF     ER    Y    F FK LVSPS     + V +AVTGSSM QAW GFS A P+GHT + AR  LTIPVN
Sbjct: 1595 GRHIFILVDEIQHFFNDDVSERLRLGYRARQF-FKALVSPSQRR--NRVAVAVTGSSMIQAWMGFSEASPNGHTLAGARRTLTIPVN 1678
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BLAST of jgi.p|Trimin1|350616 vs. uniprot
Match: A0A836C8N6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.100e-5
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0 
Query:  288 TMGPPSEVYMAVTGSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVN 333
            T  P   V  AVTGSSM QAW GFS A P+GHT  +AR+ LTIP+N
Sbjct:   72 TEAPRQRVKFAVTGSSMAQAWLGFSYAAPYGHTLEEARHTLTIPIN 117
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350616 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YNJ1_9STRA6.640e-209100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7A6_9STRA4.970e-1151.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIZ1_9STRA8.280e-1154.02Utp13 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A836C8N6_9STRA1.100e-560.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..59
NoneNo IPR availableCOILSCoilCoilcoord: 113..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_67contigContig_67:666582..671260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350616mRNA_10412Tribonema minus UTEX_B_3156 mRNAContig_67 666582..671536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350616|estExt_Genemark1.C_Ctg_670075 ID=Trimin1|350616|estExt_Genemark1.C_Ctg_670075|Name=jgi.p|Trimin1|350616|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=361bp
MAVANSADASPSGDNSSGGGGSGSSDSMVNSISTVSEDIRAVEEDMKEVE
ANIKSVTAQIECVTGVIQGGKDADDQPFPDEYLGMKSKDPQLRDHLSQLM
RHWSELMQKEGRLSTDKEQLRKDKERLLEAQKELQHQKQLGANPGVQLLD
EVQPFTEFVSSGIKVLKFLEKDRMPQHYFVDSYDAVGFCRKFVAATKTPH
WVKPHAVITGLAKLGKSTVLNYVLAAVIREMCPDALIWRYEVGPIGRGGR
PVFVLIDEVQRFFTKYDERHDNYSPPSFIFKRLVSPSTMGPPSEVYMAVT
GSSMCQAWQGFSSAPPHGHTPSQARYVLTIPVNEDEQGGLSKKCRERADF
VIELPEPSTM*
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